BLASTX nr result

ID: Coptis21_contig00012676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012676
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283439.2| PREDICTED: probable disease resistance prote...    67   1e-09
emb|CBI20159.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002330398.1| BED finger-nbs-lrr resistance protein [Popul...    64   2e-08
emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]    62   5e-08
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    60   1e-07

>ref|XP_002283439.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1276

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/67 (56%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
 Frame = -2

Query: 181  PRLKELEFYFLPKLKSIWKGVMVCDSLQ-TVWVRNCPELKRLPLF------NREHQSAPP 23
            P L+ L    LPKLKSIWKG M CDSLQ TVW  NCPEL+RLPL       + E +++ P
Sbjct: 1160 PNLQSLTLENLPKLKSIWKGTMTCDSLQLTVW--NCPELRRLPLSVQINDGSGERRASTP 1217

Query: 22   SLKQING 2
             LKQI G
Sbjct: 1218 PLKQIRG 1224


>emb|CBI20159.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/67 (56%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
 Frame = -2

Query: 181 PRLKELEFYFLPKLKSIWKGVMVCDSLQ-TVWVRNCPELKRLPLF------NREHQSAPP 23
           P L+ L    LPKLKSIWKG M CDSLQ TVW  NCPEL+RLPL       + E +++ P
Sbjct: 636 PNLQSLTLENLPKLKSIWKGTMTCDSLQLTVW--NCPELRRLPLSVQINDGSGERRASTP 693

Query: 22  SLKQING 2
            LKQI G
Sbjct: 694 PLKQIRG 700


>ref|XP_002330398.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222871783|gb|EEF08914.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 901

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = -2

Query: 184 LPRLKELEFYFLPKLKSIWKGVMVCDSLQTVWVRNCPELKRLPL----FNREHQSAPPSL 17
           LP+L+ L F  LP+LKSI +  ++C SLQT+ VR+CP+LKR+PL     +    S PPSL
Sbjct: 787 LPKLRHLSFILLPELKSICRENLICSSLQTIIVRDCPKLKRMPLCLPVLDNGRPSPPPSL 846

Query: 16  KQI 8
           ++I
Sbjct: 847 EEI 849


>emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]
          Length = 1052

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
 Frame = -2

Query: 181  PRLKELEFYFLPKLKSIWKGVMVCDSLQTVWVRNCPELKRLPL------FNREHQSAPPS 20
            P L+ L    LPKLK IWKG M CDSLQ + V +CP+L+R+PL       + E +++ P 
Sbjct: 827  PNLQSLMLEGLPKLKIIWKGTMTCDSLQQLTVLDCPKLRRVPLSVHINDCDGERRASTPP 886

Query: 19   LKQING 2
            LKQI G
Sbjct: 887  LKQIRG 892


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1075

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/60 (48%), Positives = 41/60 (68%)
 Frame = -2

Query: 187  ALPRLKELEFYFLPKLKSIWKGVMVCDSLQTVWVRNCPELKRLPLFNREHQSAPPSLKQI 8
            +LP LK L+   LP+LKSI+ G ++CDSLQ + V NCP LKR+ L +R H +    L++I
Sbjct: 983  SLPNLKVLKLSNLPELKSIFHGEVICDSLQEIIVVNCPNLKRISLSHRNHANGQTPLRKI 1042