BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012667
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   331   1e-88
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   331   1e-88
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   330   2e-88
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   325   8e-87
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   322   5e-86

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  331 bits (848), Expect = 1e-88
 Identities = 170/255 (66%), Positives = 195/255 (76%)
 Frame = -2

Query: 767 SNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQDVF 588
           S+EPEL  VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR Q+V+
Sbjct: 214 SDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEVY 273

Query: 587 VKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLSGIRI 408
           VKVIS++GQK+SLSMRDVDQ TG+DLIP+KK  +DDA R NP  +NQGP SRTGLSGIRI
Sbjct: 274 VKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGANQGPVSRTGLSGIRI 333

Query: 407 TEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXXX 228
            E++  + SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG             
Sbjct: 334 VEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELE 393

Query: 227 XXXXXXEPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTML 48
                 EPAFLQGQSRYS+DMSPVKIFKNPEG           LIK          RTML
Sbjct: 394 IEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTML 453

Query: 47  DSIPKDLNRPWEDPM 3
           DSIPKDLNRPWEDPM
Sbjct: 454 DSIPKDLNRPWEDPM 468


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  331 bits (848), Expect = 1e-88
 Identities = 170/255 (66%), Positives = 195/255 (76%)
 Frame = -2

Query: 767 SNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQDVF 588
           S+EPEL  VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR Q+V+
Sbjct: 217 SDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEVY 276

Query: 587 VKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLSGIRI 408
           VKVIS++GQK+SLSMRDVDQ TG+DLIP+KK  +DDA R NP  +NQGP SRTGLSGIRI
Sbjct: 277 VKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGANQGPVSRTGLSGIRI 336

Query: 407 TEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXXX 228
            E++  + SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG             
Sbjct: 337 VEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELE 396

Query: 227 XXXXXXEPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTML 48
                 EPAFLQGQSRYS+DMSPVKIFKNPEG           LIK          RTML
Sbjct: 397 IEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTML 456

Query: 47  DSIPKDLNRPWEDPM 3
           DSIPKDLNRPWEDPM
Sbjct: 457 DSIPKDLNRPWEDPM 471


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  330 bits (846), Expect = 2e-88
 Identities = 170/255 (66%), Positives = 194/255 (76%)
 Frame = -2

Query: 767 SNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQDVF 588
           S+EPEL  VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR Q+V+
Sbjct: 226 SDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEVY 285

Query: 587 VKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLSGIRI 408
           VKVIS++GQK+SLSMRDVDQ TG+DLIP+KK  +DDA R NP   NQGP SRTGLSGIRI
Sbjct: 286 VKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGXNQGPVSRTGLSGIRI 345

Query: 407 TEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXXX 228
            E++  + SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG             
Sbjct: 346 VEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELE 405

Query: 227 XXXXXXEPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTML 48
                 EPAFLQGQSRYS+DMSPVKIFKNPEG           LIK          RTML
Sbjct: 406 IEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTML 465

Query: 47  DSIPKDLNRPWEDPM 3
           DSIPKDLNRPWEDPM
Sbjct: 466 DSIPKDLNRPWEDPM 480


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1203

 Score =  325 bits (833), Expect = 8e-87
 Identities = 168/259 (64%), Positives = 194/259 (74%)
 Frame = -2

Query: 779  SQSRSNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRG 600
            S+  S E EL  VY G++SRVMETGCFVQL+DFRGKEGLVHVSQ+A+RRI NAKDVVKR 
Sbjct: 241  SRHGSGELELYAVYKGRISRVMETGCFVQLDDFRGKEGLVHVSQMATRRITNAKDVVKRD 300

Query: 599  QDVFVKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLS 420
            Q+V+VKVIS++GQK+SLSMRDVDQ TGKDL+P+KK  +DDA R+NPQ S  GP +RTGLS
Sbjct: 301  QEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDAMRMNPQDSKGGPAARTGLS 360

Query: 419  GIRITEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXX 240
            GIRI E+D   SSRRPLKRMSSPE+WEAKQL+A+GV+ + E+P YD++ DG         
Sbjct: 361  GIRIVEEDDAGSSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDDEGDGLLYQEEGAE 420

Query: 239  XXXXXXXXXXEPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXX 60
                      EPAFLQGQSRYS+DMSPVKIFKNPEG           LIK          
Sbjct: 421  EELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQ 480

Query: 59   RTMLDSIPKDLNRPWEDPM 3
            RTMLDSIPKDLNRPWEDPM
Sbjct: 481  RTMLDSIPKDLNRPWEDPM 499


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1197

 Score =  322 bits (826), Expect = 5e-86
 Identities = 167/258 (64%), Positives = 192/258 (74%)
 Frame = -2

Query: 776  QSRSNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQ 597
            Q  S E EL  VY G++SRVMETGCFVQL+DFRGKEGLVHVSQ+A+RRI NAKDVVKR Q
Sbjct: 236  QHGSGELELYAVYKGRISRVMETGCFVQLDDFRGKEGLVHVSQMATRRITNAKDVVKRDQ 295

Query: 596  DVFVKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLSG 417
            +V+VKVIS++GQK+SLSMRDVDQ TGKDL+P+KK  +DDA R+NPQ S  GP +RTGLSG
Sbjct: 296  EVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDALRMNPQDSKDGPVARTGLSG 355

Query: 416  IRITEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXX 237
            IRI E+    SSRRPLKRMSSPE+WEAKQL+A+GV+ + E+P YD++ DG          
Sbjct: 356  IRIVEEGDVGSSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDDEGDGLLYQEEGAEE 415

Query: 236  XXXXXXXXXEPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXR 57
                     EPAFLQGQSRYS+DMSPVKIFKNPEG           LIK          R
Sbjct: 416  ELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQR 475

Query: 56   TMLDSIPKDLNRPWEDPM 3
            TMLDSIPKDLNRPWEDPM
Sbjct: 476  TMLDSIPKDLNRPWEDPM 493