BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012661
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74746.1| hypothetical protein VITISV_012024 [Vitis vinifera]   454   e-125
ref|XP_002272601.1| PREDICTED: pentatricopeptide repeat-containi...   453   e-125
ref|XP_002510687.1| pentatricopeptide repeat-containing protein,...   428   e-117
ref|XP_003528528.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-116
ref|XP_002307797.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116

>emb|CAN74746.1| hypothetical protein VITISV_012024 [Vitis vinifera]
          Length = 514

 Score =  454 bits (1167), Expect = e-125
 Identities = 228/312 (73%), Positives = 265/312 (84%)
 Frame = -2

Query: 1205 EIKSLDADKDVCEVLNRWVRFLRKGSLSLTIRELGHMDLPERALQTYCWAQKHPHLFPDD 1026
            EI++L  + DV  VLN+WVRFLRKGSLSLTIRELGHM LPERALQT+ WAQK P LFPDD
Sbjct: 198  EIRNLPLEDDVSPVLNKWVRFLRKGSLSLTIRELGHMGLPERALQTFFWAQKQPQLFPDD 257

Query: 1025 RILASTLEILARTRQLKKPFDLEKYTISASRSVIEALARGFIRGGSFSLARKLLLVAKAN 846
            RILAST+E+LART +LK PF LEK+T  A+RSVIEALARGFIR GS SLA KLLLVAK +
Sbjct: 258  RILASTVEVLARTHKLKVPFSLEKFTGLATRSVIEALARGFIRRGSLSLAWKLLLVAKDS 317

Query: 845  KRTLDPSIHAKLILELGKTPDKYRLVLKLLNELAEMDDLKLNQQDCTAVMKVCVRLGKFE 666
            KR L PSI+AKLI ELGK PDK+ LV  LL+EL E +DLKL+ QDCTAVMKVC+RLGKFE
Sbjct: 318  KRMLGPSIYAKLIFELGKNPDKHSLVQALLDELGEREDLKLSHQDCTAVMKVCIRLGKFE 377

Query: 665  IVESLFKWFKESGRDISIVMYTTLIHSRYSEEKYREAMALVWEMEVLNFLFDLPAYRVVI 486
            IVESLF W+K+S    S+VMYTTLIHSRY+E+KYREA+A+VWEME  + LFDLPAYRVVI
Sbjct: 378  IVESLFNWYKQSENSPSVVMYTTLIHSRYTEKKYREALAVVWEMEASDCLFDLPAYRVVI 437

Query: 485  KLFVALNDVSRAARYFSRLKEARFAPTYDIYRDLIKVYAASGRLAKCKELCKEVEMVGYK 306
            KLF+ALND+SR  RYFS+LKEA F+PTYDIYRD++K+Y    RLAKC+E+CKE+EM G+K
Sbjct: 438  KLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRRLAKCREVCKELEMSGFK 497

Query: 305  LDKQTESLLLQM 270
            LDK T S LLQ+
Sbjct: 498  LDKGTLSQLLQL 509


>ref|XP_002272601.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01860-like
            [Vitis vinifera]
          Length = 514

 Score =  453 bits (1166), Expect = e-125
 Identities = 228/312 (73%), Positives = 264/312 (84%)
 Frame = -2

Query: 1205 EIKSLDADKDVCEVLNRWVRFLRKGSLSLTIRELGHMDLPERALQTYCWAQKHPHLFPDD 1026
            EI+ L  + DV  VLN+WVRFLRKGSLSLTIRELGHM LPERALQT+ WAQK P LFPDD
Sbjct: 198  EIRKLPLEDDVSPVLNKWVRFLRKGSLSLTIRELGHMGLPERALQTFFWAQKQPQLFPDD 257

Query: 1025 RILASTLEILARTRQLKKPFDLEKYTISASRSVIEALARGFIRGGSFSLARKLLLVAKAN 846
            RILAST+E+LART +LK PF LEK+T  ASRSVIEALARGFIR GS SLA KLLLVAK +
Sbjct: 258  RILASTVEVLARTHKLKVPFSLEKFTGLASRSVIEALARGFIRRGSLSLAWKLLLVAKDS 317

Query: 845  KRTLDPSIHAKLILELGKTPDKYRLVLKLLNELAEMDDLKLNQQDCTAVMKVCVRLGKFE 666
            KR L PSI+AKLI ELGK PDK+ LV  LL+EL E +DLKL+ QDCTAVMKVC+RLGKFE
Sbjct: 318  KRMLGPSIYAKLIFELGKNPDKHSLVQALLDELGEREDLKLSHQDCTAVMKVCIRLGKFE 377

Query: 665  IVESLFKWFKESGRDISIVMYTTLIHSRYSEEKYREAMALVWEMEVLNFLFDLPAYRVVI 486
            IVESLF W+K+S    S+VMYTTLIHSRY+E+KYREA+A+VWEME  + +FDLPAYRVVI
Sbjct: 378  IVESLFNWYKQSENSPSVVMYTTLIHSRYTEKKYREALAVVWEMEASDCVFDLPAYRVVI 437

Query: 485  KLFVALNDVSRAARYFSRLKEARFAPTYDIYRDLIKVYAASGRLAKCKELCKEVEMVGYK 306
            KLF+ALND+SR  RYFS+LKEA F+PTYDIYRD++K+Y    RLAKC+E+CKE+EM G+K
Sbjct: 438  KLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRRLAKCREVCKELEMSGFK 497

Query: 305  LDKQTESLLLQM 270
            LDK T S LLQ+
Sbjct: 498  LDKGTLSQLLQL 509


>ref|XP_002510687.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551388|gb|EEF52874.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 469

 Score =  428 bits (1100), Expect = e-117
 Identities = 215/310 (69%), Positives = 253/310 (81%)
 Frame = -2

Query: 1205 EIKSLDADKDVCEVLNRWVRFLRKGSLSLTIRELGHMDLPERALQTYCWAQKHPHLFPDD 1026
            +IK L+ D DV  VL+   RFLRKGSLSLTIRELGHM  P+RALQT+CWAQK P L+PDD
Sbjct: 150  QIKCLNPDDDVSAVLDDCARFLRKGSLSLTIRELGHMGFPDRALQTFCWAQKQPQLYPDD 209

Query: 1025 RILASTLEILARTRQLKKPFDLEKYTISASRSVIEALARGFIRGGSFSLARKLLLVAKAN 846
            RILAST+EILAR + LK P D +K+T  ASR VIEA+ RGF++GG   LA KLL VAK +
Sbjct: 210  RILASTVEILARNQDLKVPIDWQKFTSLASRGVIEAMIRGFLKGGRLKLAWKLLAVAKHD 269

Query: 845  KRTLDPSIHAKLILELGKTPDKYRLVLKLLNELAEMDDLKLNQQDCTAVMKVCVRLGKFE 666
            KR LD S++A+LILELGK PDKY LV +LL+EL E +DL L+ QDCTA+MKVC+RL KFE
Sbjct: 270  KRMLDASLYARLILELGKNPDKYMLVEQLLDELGEREDLNLSHQDCTAIMKVCIRLQKFE 329

Query: 665  IVESLFKWFKESGRDISIVMYTTLIHSRYSEEKYREAMALVWEMEVLNFLFDLPAYRVVI 486
             VE LF WFK+SG + S+VMYTTLIHSRYSE+KYREA+A VWEME  +FLFDLPAYRVVI
Sbjct: 330  FVECLFTWFKQSGHEPSVVMYTTLIHSRYSEKKYREALAGVWEMEGSSFLFDLPAYRVVI 389

Query: 485  KLFVALNDVSRAARYFSRLKEARFAPTYDIYRDLIKVYAASGRLAKCKELCKEVEMVGYK 306
            KLFVALND+ RA RYFS+LKEA  +PTYDIYR+LIK+Y  SGRLAKCKE+ KE EM G+K
Sbjct: 390  KLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLIKIYLVSGRLAKCKEIWKEAEMAGFK 449

Query: 305  LDKQTESLLL 276
            LD+Q +  LL
Sbjct: 450  LDEQIKMDLL 459


>ref|XP_003528528.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01860-like
            [Glycine max]
          Length = 478

 Score =  424 bits (1091), Expect = e-116
 Identities = 203/308 (65%), Positives = 259/308 (84%)
 Frame = -2

Query: 1205 EIKSLDADKDVCEVLNRWVRFLRKGSLSLTIRELGHMDLPERALQTYCWAQKHPHLFPDD 1026
            +I  L  D DV ++L +WV+FLRKGSLSLTIRELGHM  PERALQT+ WAQ  PHLFPDD
Sbjct: 170  QISRLGPDADVSKILGKWVQFLRKGSLSLTIRELGHMGFPERALQTFLWAQNQPHLFPDD 229

Query: 1025 RILASTLEILARTRQLKKPFDLEKYTISASRSVIEALARGFIRGGSFSLARKLLLVAKAN 846
             ILAST+E+LAR  +L+ PF+L +YT  ASR+V+EA+ +GFI+GG+   A K+L+VA+ +
Sbjct: 230  WILASTVEVLARNHELRIPFNLGQYTGLASRAVLEAMIKGFIKGGNLRFAWKVLIVARRD 289

Query: 845  KRTLDPSIHAKLILELGKTPDKYRLVLKLLNELAEMDDLKLNQQDCTAVMKVCVRLGKFE 666
            KR LD SI+AKLILELGK PD++R VL LL+EL E D+L L+QQDCTA+MKVCV++GKFE
Sbjct: 290  KRMLDSSIYAKLILELGKNPDRHRHVLPLLDELGERDELNLSQQDCTAIMKVCVKMGKFE 349

Query: 665  IVESLFKWFKESGRDISIVMYTTLIHSRYSEEKYREAMALVWEMEVLNFLFDLPAYRVVI 486
            +VESLF WFK+SG   SIVM+T++IHSRY+E+KYREA+A+VWEME  N LFDLPAYRVVI
Sbjct: 350  VVESLFSWFKQSGYQPSIVMFTSVIHSRYTEKKYREALAVVWEMEASNCLFDLPAYRVVI 409

Query: 485  KLFVALNDVSRAARYFSRLKEARFAPTYDIYRDLIKVYAASGRLAKCKELCKEVEMVGYK 306
            KLFVALND+SRA RYFS+LKEA F+P++ +Y+D++++Y ASGR+AKCKELC+E E+ G+K
Sbjct: 410  KLFVALNDLSRATRYFSKLKEAGFSPSFGLYKDMLQIYMASGRIAKCKELCREAEIAGFK 469

Query: 305  LDKQTESL 282
            LDK   S+
Sbjct: 470  LDKYLVSV 477


>ref|XP_002307797.1| predicted protein [Populus trichocarpa] gi|222857246|gb|EEE94793.1|
            predicted protein [Populus trichocarpa]
          Length = 475

 Score =  424 bits (1089), Expect = e-116
 Identities = 212/312 (67%), Positives = 252/312 (80%)
 Frame = -2

Query: 1205 EIKSLDADKDVCEVLNRWVRFLRKGSLSLTIRELGHMDLPERALQTYCWAQKHPHLFPDD 1026
            EIK L  D+DV  VL+   R+L KGSLSLTIRELGH+ LPERALQT+CW QK P LFPDD
Sbjct: 145  EIKRLSPDQDVSVVLDNCSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQPRLFPDD 204

Query: 1025 RILASTLEILARTRQLKKPFDLEKYTISASRSVIEALARGFIRGGSFSLARKLLLVAKAN 846
            R+LAST+E+LAR   LK PF+LEK+T  ASR VIEA+ +G IRGGS  L+ KL+ VAK  
Sbjct: 205  RVLASTVEVLARNHDLKVPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLSWKLISVAKDG 264

Query: 845  KRTLDPSIHAKLILELGKTPDKYRLVLKLLNELAEMDDLKLNQQDCTAVMKVCVRLGKFE 666
            KR LDPS++AK+ILELGK PDK+ L   LL+ELAE +DL L+QQDCTAVMKVC++LGKFE
Sbjct: 265  KRMLDPSVYAKIILELGKNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFE 324

Query: 665  IVESLFKWFKESGRDISIVMYTTLIHSRYSEEKYREAMALVWEMEVLNFLFDLPAYRVVI 486
             VESLF WF++SG + S+VMYTTLIHSRYSE KYREA+A+VWEME  + LFDL AYRVVI
Sbjct: 325  AVESLFNWFRQSGHEPSVVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVI 384

Query: 485  KLFVALNDVSRAARYFSRLKEARFAPTYDIYRDLIKVYAASGRLAKCKELCKEVEMVGYK 306
            KLFVALND+ RA RYFS+LKEA  +PTYDIYR+LI +Y  SGRLAKCKE+ KE EM G+K
Sbjct: 385  KLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFK 444

Query: 305  LDKQTESLLLQM 270
              K+  + LLQ+
Sbjct: 445  FSKEMAAGLLQL 456