BLASTX nr result

ID: Coptis21_contig00012657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012657
         (1602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326778.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114
ref|XP_002267588.1| PREDICTED: uncharacterized protein LOC100249...   411   e-112
ref|XP_002304394.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_002519892.1| clathrin binding protein, putative [Ricinus ...   400   e-109
ref|XP_003612558.1| Rho guanine nucleotide exchange factor [Medi...   389   e-105

>ref|XP_002326778.1| predicted protein [Populus trichocarpa] gi|222834100|gb|EEE72577.1|
            predicted protein [Populus trichocarpa]
          Length = 370

 Score =  417 bits (1072), Expect = e-114
 Identities = 214/368 (58%), Positives = 269/368 (73%)
 Frame = +3

Query: 297  MEAIRKQASKLREQVAKQQQAILKQLGHIGSENLIVDESVLQCHEQLQKLYDSTRAAKHF 476
            MEAI+KQA++LREQVAKQQQA+LK LGH  +E +IVDE+ LQC++ LQ LY+STRAAKHF
Sbjct: 1    MEAIKKQATRLREQVAKQQQAVLKHLGHFSNEGIIVDEAELQCYQHLQNLYNSTRAAKHF 60

Query: 477  QRNLVRGVEGLATISSKQMEIVRKLAEDCCKYGSENQNSGSALACLSLHFGASHNLVERE 656
            Q+N+VRG EG  +ISSKQMEI+RKLA++CCKYG+ENQ+  + +A   L FGASHNL+E E
Sbjct: 61   QKNIVRGAEGFVSISSKQMEILRKLADECCKYGAENQSENNYVARTVLQFGASHNLMENE 120

Query: 657  GENFLRILRSQICEPLRASVGGAPLEDARHLTHRYDRIRXXXXXXXXXXXKRRXXXXXXX 836
             E  L +L  Q+ +PLRA + GAPLEDARHLTHRYD++R           +RR       
Sbjct: 121  KEILLGVLNDQVSKPLRALITGAPLEDARHLTHRYDKLRQEVEAQAAEVLRRRSKTRDSE 180

Query: 837  XXXXXXXXLQNAEAKLKELKSKMMALGREATAAMSSVEVQQQRLTFQRLISMVNSERSFH 1016
                    LQ AEA+L ELKS +MALGREATAAMSSVE QQQ +T QRL SMV++ER +H
Sbjct: 181  ISAESCMKLQAAEARLTELKSTVMALGREATAAMSSVENQQQEITAQRLFSMVDAERCYH 240

Query: 1017 QSATAILEKLHAEMILLVQKSKSELESASVMRDLDFSRVQTEVISDGSGDLEPYVQKDSY 1196
            Q    IL+KLHAEMIL  Q ++S L+SA+  RD+          S+GS +      KD+ 
Sbjct: 241  QHVLTILDKLHAEMILEEQLNESALQSATTQRDVILPPEPKNNTSNGSENHMHPNHKDAL 300

Query: 1197 FVAQVIHPFDAQADGELSLSVGDYVVVRQVTPNGWCEGECNGKSGWFPSAYMERREEAPT 1376
            ++A+VIHPFDAQA+GELSL + D+VVVR+V P GW EGEC GK+GWFPSAY+E+ E+AP 
Sbjct: 301  YIAKVIHPFDAQAEGELSLFIDDFVVVRKVAPTGWSEGECKGKAGWFPSAYIEKHEKAPA 360

Query: 1377 SKSTEDSS 1400
            SK  E+SS
Sbjct: 361  SKIMEESS 368


>ref|XP_002267588.1| PREDICTED: uncharacterized protein LOC100249391 isoform 1 [Vitis
            vinifera] gi|296085501|emb|CBI29233.3| unnamed protein
            product [Vitis vinifera]
          Length = 371

 Score =  411 bits (1056), Expect = e-112
 Identities = 211/368 (57%), Positives = 268/368 (72%)
 Frame = +3

Query: 297  MEAIRKQASKLREQVAKQQQAILKQLGHIGSENLIVDESVLQCHEQLQKLYDSTRAAKHF 476
            MEAIRKQASKLREQVA+QQQA+LKQLGH G E ++VDE+      QLQ LY+STR AKHF
Sbjct: 1    MEAIRKQASKLREQVARQQQAVLKQLGHFGIETVVVDEAE---QRQLQNLYNSTRTAKHF 57

Query: 477  QRNLVRGVEGLATISSKQMEIVRKLAEDCCKYGSENQNSGSALACLSLHFGASHNLVERE 656
            Q+++VRG+EG  + SSKQMEIVR++AEDCCKYG+ENQ++GS LA  +L+FG SH+ +E+E
Sbjct: 58   QKDIVRGIEGFVSTSSKQMEIVRRMAEDCCKYGTENQSTGSPLARAALYFGNSHSSMEKE 117

Query: 657  GENFLRILRSQICEPLRASVGGAPLEDARHLTHRYDRIRXXXXXXXXXXXKRRXXXXXXX 836
             E  L +   Q+ EPLR  + GAPLEDARHLTHRY+R+R           +R+       
Sbjct: 118  RETLLGVFCDQVSEPLRVLITGAPLEDARHLTHRYERLRQEVESQAADVLRRQAKFRDPA 177

Query: 837  XXXXXXXXLQNAEAKLKELKSKMMALGREATAAMSSVEVQQQRLTFQRLISMVNSERSFH 1016
                    LQ+AEAKL ELKS MMALGREATAAM SVE QQQR+TFQRL++MV +ERS+H
Sbjct: 178  TSAESSIKLQSAEAKLSELKSAMMALGREATAAMLSVEAQQQRITFQRLLTMVEAERSYH 237

Query: 1017 QSATAILEKLHAEMILLVQKSKSELESASVMRDLDFSRVQTEVISDGSGDLEPYVQKDSY 1196
            Q+  A LEKL+ EMI+  ++++S  +  ++ +D+       +  S+G  +     Q  SY
Sbjct: 238  QTVLATLEKLYDEMIMEKKQNESSSQPITMEKDVCVPTTSKDANSNGFDNHGHANQNGSY 297

Query: 1197 FVAQVIHPFDAQADGELSLSVGDYVVVRQVTPNGWCEGECNGKSGWFPSAYMERREEAPT 1376
            F+A+VIHPFDAQADGEL LSV DYVVVRQV PNGW EGEC G +GWFPSAY+ERR++AP 
Sbjct: 298  FIAKVIHPFDAQADGELGLSVDDYVVVRQVAPNGWSEGECKGTAGWFPSAYVERRDKAPA 357

Query: 1377 SKSTEDSS 1400
            S   E++S
Sbjct: 358  SVINEEAS 365


>ref|XP_002304394.1| predicted protein [Populus trichocarpa] gi|222841826|gb|EEE79373.1|
            predicted protein [Populus trichocarpa]
          Length = 371

 Score =  401 bits (1031), Expect = e-109
 Identities = 203/368 (55%), Positives = 266/368 (72%), Gaps = 1/368 (0%)
 Frame = +3

Query: 297  MEAIRKQASKLREQVAKQQQAILKQLGHIGSENLIVDESVLQCHEQLQKLYDSTRAAKHF 476
            MEA +KQA++LREQVAKQQQAILK LGH+ +E +IVDE+ LQC++ LQ LY+STR AKHF
Sbjct: 1    MEAFKKQATRLREQVAKQQQAILKHLGHLSNEGIIVDEAELQCYQHLQNLYNSTRTAKHF 60

Query: 477  QRNLVRGVEGLATISSKQMEIVRKLAEDCCKYGSENQNSGSALACLSLHFGASHNLVERE 656
            Q+N+VRGVEG  ++SSKQME++R+LA++CCKYG+ENQ   + +A   L FGASHNL+E E
Sbjct: 61   QKNIVRGVEGFVSVSSKQMEMLRRLADECCKYGAENQKENNYVARAVLQFGASHNLMENE 120

Query: 657  GENFLRILRSQICEPLRASVGGAPLEDARHLTHRYDRIRXXXXXXXXXXXKRRXXXXXXX 836
             E  + +L  Q+ +PLRA + GAPLEDAR LTH +D++R           + R       
Sbjct: 121  KETLVGVLNDQVSKPLRALITGAPLEDARRLTHHHDKLRQAVEVQAAEVLRCRSKTRDSE 180

Query: 837  XXXXXXXXLQNAEAKLKELKSKMMALGREATAAMSSVEVQQQRLTFQRLISMVNSERSFH 1016
                    L+ AEA+L ELKS +M+LGREATAAMSSVE QQQ++T QRL SM+++ER +H
Sbjct: 181  ISAESCTKLRAAEARLAELKSTVMSLGREATAAMSSVENQQQQITVQRLFSMIDAERCYH 240

Query: 1017 QSATAILEKLHAEMILLVQKSKSELESASVMRDLDFSRVQTEVISDGS-GDLEPYVQKDS 1193
            Q    IL+KLHAEMIL  Q ++S  +S +  R++    V     S+GS   ++   Q+D 
Sbjct: 241  QHVLTILDKLHAEMILEEQLNESSPQSETTQREMIVPSVHENNTSNGSKNHMDNNNQEDG 300

Query: 1194 YFVAQVIHPFDAQADGELSLSVGDYVVVRQVTPNGWCEGECNGKSGWFPSAYMERREEAP 1373
             F+A+VIHPFDAQA+GELSLSV D+VVVRQV P GW EGEC GK+GWFPSAY+E+ E +P
Sbjct: 301  LFIAKVIHPFDAQAEGELSLSVDDFVVVRQVAPTGWSEGECKGKAGWFPSAYIEKHENSP 360

Query: 1374 TSKSTEDS 1397
             SK+ E+S
Sbjct: 361  ASKTMEES 368


>ref|XP_002519892.1| clathrin binding protein, putative [Ricinus communis]
            gi|223540938|gb|EEF42496.1| clathrin binding protein,
            putative [Ricinus communis]
          Length = 368

 Score =  400 bits (1029), Expect = e-109
 Identities = 206/368 (55%), Positives = 267/368 (72%), Gaps = 2/368 (0%)
 Frame = +3

Query: 297  MEAIRKQASKLREQVAKQQQAILKQLGHIGSENLIVDESVLQCHEQLQKLYDSTRAAKHF 476
            MEAI+KQA+KLREQVAKQQQA+LK LGH G+E +IVDE+  QC++QLQ LY+STR AKHF
Sbjct: 1    MEAIKKQAAKLREQVAKQQQAVLKHLGHFGNEAVIVDEAEFQCYQQLQNLYNSTRTAKHF 60

Query: 477  QRNLVRGVEGLATISSKQMEIVRKLAEDCCKYGSENQNSGSALACLSLHFGASHNLVERE 656
            Q+N+VRG+EG  ++SSKQ+EI RKLAEDCCKYG++ Q +   +A   L FG SHNL+E E
Sbjct: 61   QKNIVRGIEGFISVSSKQIEIARKLAEDCCKYGADTQTTNLHVARAVLQFGTSHNLMENE 120

Query: 657  GENFLRILRSQICEPLRASVGGAPLEDARHLTHRYDRIRXXXXXXXXXXXKRRXXXXXXX 836
             E    IL  Q+  PLRA V GAPLEDARHLTHRY+++R           +RR       
Sbjct: 121  RETLHGILGDQVSVPLRALVTGAPLEDARHLTHRYEKLRQEVEAQGAEVLRRRSKTRESD 180

Query: 837  XXXXXXXXLQNAEAKLKELKSKMMALGREATAAMSSVEVQQQRLTFQRLISMVNSERSFH 1016
                    L++AE +L ELKS MMALG+EAT+AM SVE QQQ++T QRL +MV++ER +H
Sbjct: 181  ISAENCMRLRSAETRLTELKSTMMALGKEATSAMLSVENQQQQITVQRLFTMVDAERCYH 240

Query: 1017 QSATAILEKLHAEMILLVQKSKSELESASVMRDLDF--SRVQTEVISDGSGDLEPYVQKD 1190
            Q   +IL+KLHAEM+L  Q + S  +S  + +D +     +  +  S+GS D + + QKD
Sbjct: 241  QHVLSILDKLHAEMVLEEQLNDSSSQSMIIHQDANAPPQLLHQDATSNGS-DGQIHNQKD 299

Query: 1191 SYFVAQVIHPFDAQADGELSLSVGDYVVVRQVTPNGWCEGECNGKSGWFPSAYMERREEA 1370
            + F+A+VIHPFDAQA+GELSLS+ DYVVVRQV P GW EGEC GK+GWFPSAY+E++E+A
Sbjct: 300  TVFIAKVIHPFDAQAEGELSLSLDDYVVVRQVAPTGWSEGECKGKAGWFPSAYIEKQEKA 359

Query: 1371 PTSKSTED 1394
            P +K  E+
Sbjct: 360  PANKIAEE 367


>ref|XP_003612558.1| Rho guanine nucleotide exchange factor [Medicago truncatula]
            gi|355513893|gb|AES95516.1| Rho guanine nucleotide
            exchange factor [Medicago truncatula]
          Length = 366

 Score =  389 bits (998), Expect = e-105
 Identities = 207/367 (56%), Positives = 259/367 (70%), Gaps = 2/367 (0%)
 Frame = +3

Query: 297  MEAIRKQASKLREQVAKQQQAILKQLGHIGSENLIVDESVLQCHEQLQKLYDSTRAAKHF 476
            M+AIRKQAS+LREQVAKQQQ+IL+QLG + +E L+ DE  L+C  +LQKLY ST+ AKHF
Sbjct: 1    MDAIRKQASRLREQVAKQQQSILRQLGQLSNEPLMADEFELECFHKLQKLYTSTKTAKHF 60

Query: 477  QRNLVRGVEGLATISSKQMEIVRKLAEDCCKYGSENQNSGSA--LACLSLHFGASHNLVE 650
            QR++VRGVEGL ++SSKQMEIVRKLA+DCCKYG+EN+N GS   LA  SL FG S+ ++E
Sbjct: 61   QRHIVRGVEGLISVSSKQMEIVRKLAKDCCKYGNENENQGSTYPLARASLQFGNSYEILE 120

Query: 651  REGENFLRILRSQICEPLRASVGGAPLEDARHLTHRYDRIRXXXXXXXXXXXKRRXXXXX 830
             E E  L IL  QI EPLRA + GAPLEDARHLTH YD++R           +RR     
Sbjct: 121  NERETLLGILGDQISEPLRAQITGAPLEDARHLTHNYDKLRQEVEGQAAEVLRRRSKLRD 180

Query: 831  XXXXXXXXXXLQNAEAKLKELKSKMMALGREATAAMSSVEVQQQRLTFQRLISMVNSERS 1010
                      LQNAE KLKE KS ++ALGREATAAMSSVE QQQ +T Q L +MV++ER+
Sbjct: 181  SSLSAESSMRLQNAEKKLKEHKSALVALGREATAAMSSVEEQQQHITLQSLSTMVDAERA 240

Query: 1011 FHQSATAILEKLHAEMILLVQKSKSELESASVMRDLDFSRVQTEVISDGSGDLEPYVQKD 1190
            FH+ A  IL+KLHAEMI++ ++   +  S  + ++        +  S+G G  +   Q  
Sbjct: 241  FHRHALVILDKLHAEMIMIDERQPQDSTSFPLPKEEHNQPANQKANSNGIG-YKHNTQTG 299

Query: 1191 SYFVAQVIHPFDAQADGELSLSVGDYVVVRQVTPNGWCEGECNGKSGWFPSAYMERREEA 1370
            +YF A+VIHPFDAQA+GELSLSV DYVVVRQV  NGW EGE NG +GWFPSAY+ R++  
Sbjct: 300  TYFFAKVIHPFDAQAEGELSLSVDDYVVVRQVAANGWSEGEFNGNAGWFPSAYVLRQDVV 359

Query: 1371 PTSKSTE 1391
            P +K  E
Sbjct: 360  PANKIPE 366


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