BLASTX nr result
ID: Coptis21_contig00012648
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012648
(1807 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251... 617 e-174
ref|XP_002519751.1| conserved hypothetical protein [Ricinus comm... 604 e-170
ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|2... 603 e-170
ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago tr... 531 e-148
dbj|BAE71246.1| hypothetical protein [Trifolium pratense] 511 e-142
>ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera]
gi|297740629|emb|CBI30811.3| unnamed protein product
[Vitis vinifera]
Length = 665
Score = 617 bits (1592), Expect = e-174
Identities = 316/535 (59%), Positives = 413/535 (77%), Gaps = 4/535 (0%)
Frame = -3
Query: 1805 RDHPGQKSWIVRFSGIDTVEKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDT 1626
R HPGQK+WI++F GIDTVE+AKQL+GS+LLV E+DRP LEEGEFY+RDL+GM+V LK+T
Sbjct: 133 RGHPGQKTWILKFGGIDTVEEAKQLVGSSLLVREDDRPELEEGEFYSRDLLGMRVTLKET 192
Query: 1625 GLSVGTVVNVFNSGGPNDLLQVMLNSSDEAHDATGSSETGPGVSGHLAWVPFVKAIVPDV 1446
G VGTVVNVF++G NDLLQVML+ S + D TG+ ++ GVSG L WVPFV+AIVP+V
Sbjct: 193 GEPVGTVVNVFSTGA-NDLLQVMLDPSVKTPDHTGNPKSETGVSGPLVWVPFVEAIVPNV 251
Query: 1445 DMNRREMRITPPKGLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLCEMEQKHI 1266
DMN+REM+ITPPKGLLELNLRS RSKKERRQLEWK+R+K RRLIAAKKKL EMEQ+H+
Sbjct: 252 DMNKREMQITPPKGLLELNLRSHERSKKERRQLEWKQRRKFQRRLIAAKKKLHEMEQQHV 311
Query: 1265 FHGLRFGEKAQRNLLADHIVGINFKLFQDALQNFEIVTTRWNLSEFISAYSTKLLENPIK 1086
FHG RFG+KAQR+LLAD IVG+N KL Q ALQN E+ + RW+ SEFIS TKL + +K
Sbjct: 312 FHGFRFGQKAQRSLLADQIVGVNSKLLQQALQNIELSSQRWSSSEFISTKLTKLGQRTLK 371
Query: 1085 VSEECLISCGTKDNMDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFANLEQGDSGRA 906
VS++CL + G+++ +D+ ++ KGL+++S+GK AIVL V D GR + E DS A
Sbjct: 372 VSKKCLTTPGSEEKLDSNFELQEKGLHLMSKGKMAIVLFVNDSEKHGRCSVPELVDSESA 431
Query: 905 ENSSNISHIQALLNDE----LEGDCGFLPLVMVSPAHETQAIRQSFLDHDFFSFNADKVW 738
NS+ S +Q LL+D+ + D +PL+MVSPAHE ++ F +HD F+F+ KVW
Sbjct: 432 GNST--SFLQTLLSDDRISLKKEDRVSVPLIMVSPAHEVHSLENLFSNHDHFAFDPKKVW 489
Query: 737 FLEEENLPVVSNSVEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVEY 558
FLE+E LPVVSNS+ E+ K+LMKS WEILQ+ VGSGG+ SLLSS IL++L+EMGVEY
Sbjct: 490 FLEDEKLPVVSNSLGGENTQKILMKSPWEILQTSVGSGGVISLLSSENILDNLSEMGVEY 549
Query: 557 VQVCSLGKRSVVGNPLFFGYVKSREADLGIKICKSNEESEDDFNVIFSLKYLKKITKQSD 378
+++CS+ + V G+ L G V S E+D+GI+I + E+ E++F++IFS+K++ K+ KQ
Sbjct: 550 IEICSVNEEFVSGHSL-LGLVSSLESDVGIQISEGIEDIEENFHMIFSMKFMSKLAKQMK 608
Query: 377 KLKFHAITKQNSHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 213
KL+FH I K NSHVEM++KEWVDV P SPNS EL CSI SSL+ C D++CV+E+
Sbjct: 609 KLQFHGIPKLNSHVEMVEKEWVDVTPTSPNSLELGCSIYSSLNACSLDKVCVVEI 663
>ref|XP_002519751.1| conserved hypothetical protein [Ricinus communis]
gi|223541168|gb|EEF42724.1| conserved hypothetical
protein [Ricinus communis]
Length = 631
Score = 604 bits (1557), Expect = e-170
Identities = 308/537 (57%), Positives = 405/537 (75%), Gaps = 5/537 (0%)
Frame = -3
Query: 1805 RDHPGQKSWIVRFSGIDTVEKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDT 1626
R + GQKSWI+RF GIDTVE+A+QL+GSTLLV E+DRP LEEG+FYTRDLVGM+VILK+T
Sbjct: 96 RGYHGQKSWILRFDGIDTVEQARQLVGSTLLVREDDRPELEEGDFYTRDLVGMRVILKET 155
Query: 1625 GLSVGTVVNVFNSGGPNDLLQVMLNSSDEAHDATGSSETGP-GVSGHLAWVPFVKAIVPD 1449
G VGTVVNVF+SG DLLQVML ++ + T T GVS L WVPFV+AIVPD
Sbjct: 156 GQCVGTVVNVFDSGA-GDLLQVMLCPTEGVPEGTEKLMTAETGVSSPLVWVPFVEAIVPD 214
Query: 1448 VDMNRREMRITPPKGLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLCEMEQKH 1269
VDM +REM ITPPKGLL+LN+RSD RSKKERRQLEWKERKK RRLIAAKKKLCEMEQKH
Sbjct: 215 VDMTKREMWITPPKGLLKLNIRSDERSKKERRQLEWKERKKFQRRLIAAKKKLCEMEQKH 274
Query: 1268 IFHGLRFGEKAQRNLLADHIVGINFKLFQDALQNFEIVTTRWNLSEFISAYSTKLLENPI 1089
+F GLR+GEK QR+ LAD IVG+N KL Q ALQN I RW ++E ISA TKL++ +
Sbjct: 275 VFDGLRYGEKPQRSSLADQIVGVNSKLLQQALQNIGISFQRWGITELISATRTKLIQRSL 334
Query: 1088 KVSEECLISCGTKDNMDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFANLEQGDSGR 909
K+S++CL C T++++ A M+ KGLN++S GK IVLVV + G + + D+
Sbjct: 335 KLSKKCLTPCATEESLTAYFDMQDKGLNLLSTGKVGIVLVVNEVDKNGTSHSPDVVDTKN 394
Query: 908 AENSSNISHIQALLNDELE----GDCGFLPLVMVSPAHETQAIRQSFLDHDFFSFNADKV 741
+E+ + S +Q L+D+ D F+PLV+V P E +++++ F D+D+F F+ DKV
Sbjct: 395 SEDLA-FSLLQKSLSDDQSFLKMEDRAFVPLVLVCPMQEIRSLKKLFSDNDYFGFDTDKV 453
Query: 740 WFLEEENLPVVSNSVEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVE 561
WFLEEE LPVV++S EE R K+LMKS WEILQ PVGSGG+ SLLS+H I E LN+M V+
Sbjct: 454 WFLEEEKLPVVNSSYEEPSRCKILMKSPWEILQVPVGSGGVISLLSTHGIPEILNKMDVK 513
Query: 560 YVQVCSLGKRSVVGNPLFFGYVKSREADLGIKICKSNEESEDDFNVIFSLKYLKKITKQS 381
Y++VCS+G+ +V+GN L GYV S +A++G++I + E SE+ F++IFS +K++T++
Sbjct: 514 YIEVCSVGQNNVLGNALLLGYVNSCKAEIGLQIFEDTEGSEESFDMIFSNSSMKRLTEEM 573
Query: 380 DKLKFHAITKQNSHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEVT 210
DKL+FH I+K NS+VE++DKEW D++P SPNSY+ + SI S+L+ CP D+ICV+E+T
Sbjct: 574 DKLQFHTISKPNSYVELVDKEWTDIIPSSPNSYQFYSSIYSALNGCPLDKICVIEIT 630
>ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|222875374|gb|EEF12505.1|
predicted protein [Populus trichocarpa]
Length = 673
Score = 603 bits (1555), Expect = e-170
Identities = 311/537 (57%), Positives = 413/537 (76%), Gaps = 5/537 (0%)
Frame = -3
Query: 1805 RDHPGQKSWIVRFSGIDTVEKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDT 1626
R H G+KSWI++F GIDTV++AK L+GSTLLV E +RP LEEGEFY+RDL+GM+VILK+T
Sbjct: 140 RGHHGRKSWILKFGGIDTVDRAKLLVGSTLLVREYERPELEEGEFYSRDLIGMRVILKET 199
Query: 1625 GLSVGTVVNVFNSGGPNDLLQVMLNSSDEAHDATGSSETGP-GVSGHLAWVPFVKAIVPD 1449
G VGTVVNVF++GG NDLLQVML +S + TG S+ GVSGHLAWVPFV+AIVPD
Sbjct: 200 GECVGTVVNVFDNGG-NDLLQVMLYTSSDVPGGTGKSKPAEAGVSGHLAWVPFVEAIVPD 258
Query: 1448 VDMNRREMRITPPKGLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLCEMEQKH 1269
V+MN REMRITPPKGLLELNLR D RSKKERR+LEW+ERKK RRLIAAKKKLCEMEQKH
Sbjct: 259 VNMNEREMRITPPKGLLELNLRQDERSKKERRELEWRERKKFQRRLIAAKKKLCEMEQKH 318
Query: 1268 IFHGLRFGEKAQRNLLADHIVGINFKLFQDALQNFEIVTTRWNLSEFISAYSTKLLENPI 1089
+F GLR+G+K++R LLAD IVG+N KL Q AL+N EI + R + +E ISA TK +++ +
Sbjct: 319 VFDGLRYGDKSKRGLLADQIVGVNSKLLQQALENIEISSKRCSATELISATRTKHIKSSL 378
Query: 1088 KVSEECLISCGTKDNMDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFANLEQGDSGR 909
+S+E I+C ++ + A ++ KGL++IS GK AIVLV+ D +G+ N DS
Sbjct: 379 MISKE-FITCANEEKLGANFKLQEKGLSLISTGKVAIVLVLND-IEKGKGDNPGVVDSES 436
Query: 908 AENSSNISHIQALLNDELE----GDCGFLPLVMVSPAHETQAIRQSFLDHDFFSFNADKV 741
+ENS + +Q L+D+ D +PL++V PA E Q++++ F ++D+F+F+++KV
Sbjct: 437 SENSL-LFFLQKSLSDDQTFVKIEDRVSVPLILVCPAQEIQSLQKLFSNNDYFAFDSNKV 495
Query: 740 WFLEEENLPVVSNSVEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGVE 561
WFLEEE +PVVS+S EE RHK++MKS WEILQSPVGSGG+ SLLSS I E+L++MGVE
Sbjct: 496 WFLEEEKIPVVSSSEEEGKRHKIMMKSPWEILQSPVGSGGVISLLSSVNIPENLSKMGVE 555
Query: 560 YVQVCSLGKRSVVGNPLFFGYVKSREADLGIKICKSNEESEDDFNVIFSLKYLKKITKQS 381
Y+++CS + V G+PL G+V+SR+A++GIKI + ++ E+ F++IFSL +++ + +Q
Sbjct: 556 YIEICSSSQNCVTGSPLLLGFVESRKAEIGIKIVEDTKDLEESFDMIFSLNFMRLLAQQI 615
Query: 380 DKLKFHAITKQNSHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEVT 210
KL+F+AI K N HVEM+ KEWVDVVP SPNSYEL SI SSL+ CP ++ICVME+T
Sbjct: 616 HKLQFYAIPKPNLHVEMVGKEWVDVVPSSPNSYELRSSIYSSLNACPLEKICVMEIT 672
>ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago truncatula]
gi|355523914|gb|AET04368.1| Ribosome maturation factor
rimM [Medicago truncatula]
Length = 667
Score = 531 bits (1367), Expect = e-148
Identities = 281/546 (51%), Positives = 386/546 (70%), Gaps = 15/546 (2%)
Frame = -3
Query: 1805 RDHPGQKSWIVRFSGIDTVEKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDT 1626
R+H GQ WI++FSGID+ E+AK LIG+TLLVTEEDRP LEEGEFYT DL GM+V +K+
Sbjct: 123 REHSGQNCWILKFSGIDSAEEAKILIGATLLVTEEDRPELEEGEFYTHDLNGMRVFMKEN 182
Query: 1625 GLSVGTVVNVFNSGGPNDLLQVMLNSSDEAHDATGSSETGP-GVSGHLAWVPFVKAIVPD 1449
G +GTV+NVFN+G NDLLQ+ L+SS + D G + SG L VPFV+AIVPD
Sbjct: 183 GKLLGTVINVFNNGA-NDLLQISLDSSFDVLDKNGKPKPEEIEASGQLVLVPFVEAIVPD 241
Query: 1448 VDMNRREMRITPPKGLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLCEMEQKH 1269
VDMNRREM ITPPKGLLELNLR D RSKKERRQLEWKERKK +RLIAAKKKL EM+Q+H
Sbjct: 242 VDMNRREMHITPPKGLLELNLRFDDRSKKERRQLEWKERKKFQKRLIAAKKKLREMDQQH 301
Query: 1268 IFHGLRFGEKAQRNLLADHIVGINFKLFQDALQNFEIVTTRWNLSEFISAYSTKLLENPI 1089
+FHG + GEK Q +LL+D IVG+N +L Q+ALQ+ E RWN +E +SA K + +
Sbjct: 302 VFHGFQCGEKEQWSLLSDQIVGVNSRLLQEALQSLEQPANRWNAAELVSAMEEKRIRT-V 360
Query: 1088 KVSEECLISCGTKDNMDATEGMKIKGLNMISEGKAAIVLVVGDQTSQGRFANLEQGDSGR 909
++SE L++ + MK KG+ +IS GK AIVL++ ++ ++G + E ++
Sbjct: 361 QISERSLLTGSKTKLVRNIINMKEKGVELISNGKMAIVLLLKEKENEGCIYDPEVVEN-E 419
Query: 908 AENSSNISHIQALLNDELE----GDCGFLPLVMVSPAHETQAIRQSFLDHDFFSFNADKV 741
A +S + +Q LL+D + D +PL++VS A + Q++R F ++ F+F+++KV
Sbjct: 420 ATETSTLHMLQNLLSDHEKFVKVNDRVSVPLILVSSAQQIQSLRNLFTRNNHFAFDSEKV 479
Query: 740 ----------WFLEEENLPVVSNSVEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTI 591
WFLEEE LPVVS+S+E ++++K+LMKS WEILQSPVGSGG SL S H+I
Sbjct: 480 HIISSTFPFVWFLEEEKLPVVSSSLEGQNKYKILMKSPWEILQSPVGSGGFISLFSKHSI 539
Query: 590 LEDLNEMGVEYVQVCSLGKRSVVGNPLFFGYVKSREADLGIKICKSNEESEDDFNVIFSL 411
++L MGVEY+++C +RSV GN L G V +REA +GI+I + + +++F++I S+
Sbjct: 540 TDNLINMGVEYLELCCPCERSVGGNSLLVGLVDAREAKIGIQISPTIADPDENFDMILSM 599
Query: 410 KYLKKITKQSDKLKFHAITKQNSHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDR 231
+++KK+TKQS KL+F A K NS +E +DK+WV V +PNSYEL CS+ SSL+ CP D+
Sbjct: 600 EFVKKLTKQSYKLRFDATAKTNSFIESVDKDWVTVTSSTPNSYELSCSVYSSLNACPLDK 659
Query: 230 ICVMEV 213
+C++EV
Sbjct: 660 VCIVEV 665
>dbj|BAE71246.1| hypothetical protein [Trifolium pratense]
Length = 669
Score = 511 bits (1317), Expect = e-142
Identities = 275/538 (51%), Positives = 381/538 (70%), Gaps = 7/538 (1%)
Frame = -3
Query: 1805 RDHPGQKSWIVRFSGIDTVEKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDT 1626
R+H G+ WI++F GI++VE+AK LIG+TLLVTEED+P LE+GEFY DL GM+V +K+
Sbjct: 134 REHSGKNCWILKFRGIESVEEAKMLIGATLLVTEEDKPELEDGEFYAHDLNGMRVFMKEN 193
Query: 1625 GLSVGTVVNVFNSGGPNDLLQVMLNSSDEAHDATGSSETGP-GVSGHLAWVPFVKAIVPD 1449
G +GTV+NVFN+G NDLLQ+ L+SS + D G + SG L +PFV+AIV D
Sbjct: 194 GKLLGTVINVFNTGA-NDLLQISLDSSFDVLDKNGQPKPEEIDASGQLVLLPFVEAIVSD 252
Query: 1448 VDMNRREMRITPPKGLLELNLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLCEMEQKH 1269
VDMN+REM ITPPKGLLE+NLR D +SKKERRQLEWKE+KK RRLIAAKKKLCEM+Q+H
Sbjct: 253 VDMNKREMHITPPKGLLEINLRFDDKSKKERRQLEWKEKKKFQRRLIAAKKKLCEMDQQH 312
Query: 1268 IFHGLRFGEKAQRNLLADHIVGINFKLFQDALQNFEIVTTRWNLSEFISAYSTKLLENPI 1089
+FHG + GEK Q +LL+D IVG+N +L QDALQ+ + RWN +E +SA K + + +
Sbjct: 313 VFHGYQCGEKEQWSLLSDQIVGVNSRLLQDALQSLQQPAKRWNAAELVSAVQEKHI-STL 371
Query: 1088 KVSEECLISCGTKDNMDAT-EGMKIKGLNMISEGKAAIVLVVGDQTSQGRFANLEQGDSG 912
K+SE+ L++ G+KD + M+ KGL +IS+GK AIVL++ ++ ++G + + +S
Sbjct: 372 KISEKSLLT-GSKDKLVRNIIKMQEKGLELISKGKMAIVLLLNEKENEGCIYDPDVVESE 430
Query: 911 RAENSSNISHIQALLNDELE----GDCGFLPLVMVSPAHETQAIRQSFLDHDFFSFNADK 744
EN + + +Q LL D + D +PL++VS A + Q++R F ++ F F+++K
Sbjct: 431 ATENPT-LLMLQNLLCDHDKFVKVKDRLSVPLILVSSAQQLQSLRNLFARNNHFEFDSEK 489
Query: 743 VWFLEEENLPVVSNSVEEEHRHKVLMKSQWEILQSPVGSGGIFSLLSSHTILEDLNEMGV 564
VWFLEEE LPVVS S+ EE+++K+LMKS WEILQSPVGSGG L + H+I ++L MGV
Sbjct: 490 VWFLEEEKLPVVSRSLGEENKYKILMKSPWEILQSPVGSGGFIDLFTKHSIADNLINMGV 549
Query: 563 EYVQVCSLGKRSVVGNPLFFGYVKSREADLGIKICKSNEESEDDFNVIFSLKYLKKITKQ 384
EYV+VC + +V GN G V SREA +GI+I +++F++I S+ +KK+TKQ
Sbjct: 550 EYVEVCCPCETTVGGNSQLLGLVNSREAKIGIQISPKIVVPDENFDMILSMDLVKKLTKQ 609
Query: 383 SDK-LKFHAITKQNSHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 213
S K L+F A K +S VE +DK+WV + PNSYEL CSI SSL+ CP D++C++EV
Sbjct: 610 SYKLLQFDATPKISSFVENVDKDWVTITSSIPNSYELSCSIYSSLNACPLDKVCIVEV 667