BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012638
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535310.1| conserved hypothetical protein [Ricinus comm...   152   8e-35
gb|ABE98701.1| hypothetical protein (mitochondrion) [Zea mays su...   143   6e-32
gb|ABE98744.1| hypothetical protein (mitochondrion) [Zea mays su...   143   6e-32
ref|XP_002513096.1| conserved hypothetical protein [Ricinus comm...   117   3e-24
ref|XP_002529560.1| conserved hypothetical protein [Ricinus comm...   110   4e-22

>ref|XP_002535310.1| conserved hypothetical protein [Ricinus communis]
           gi|255590896|ref|XP_002535392.1| conserved hypothetical
           protein [Ricinus communis] gi|223523262|gb|EEF26991.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223523475|gb|EEF27071.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score =  152 bits (385), Expect = 8e-35
 Identities = 79/97 (81%), Positives = 80/97 (82%)
 Frame = -2

Query: 630 MARKGNPISVRLDLNRSSDPSRFSEGDRESNRMGSVFFFSLSHIFLKKKGVGGRCGCPGR 451
           MARKGNPISVRLDLNRSSD SRFSEGDRES+R     F       LKKK VGGRC CPGR
Sbjct: 1   MARKGNPISVRLDLNRSSDSSRFSEGDRESHRKWVSLFLCP---ILKKKSVGGRCRCPGR 57

Query: 450 TRLLLTLEDHRKTPGTRACRERSTLGGRASTVSPGHS 340
           TRLLLTLEDHR  PGTRACRERSTLGGRASTVSPGHS
Sbjct: 58  TRLLLTLEDHRNIPGTRACRERSTLGGRASTVSPGHS 94


>gb|ABE98701.1| hypothetical protein (mitochondrion) [Zea mays subsp. mays]
           gi|102579661|gb|ABF70941.1| hypothetical protein
           (mitochondrion) [Zea mays subsp. mays]
          Length = 163

 Score =  143 bits (360), Expect = 6e-32
 Identities = 74/94 (78%), Positives = 76/94 (80%)
 Frame = -2

Query: 630 MARKGNPISVRLDLNRSSDPSRFSEGDRESNRMGSVFFFSLSHIFLKKKGVGGRCGCPGR 451
           MARKGNPISVRLDLNRSSDPSRFSEGDRES+RMGSV  F +       KGV GRC CPGR
Sbjct: 1   MARKGNPISVRLDLNRSSDPSRFSEGDRESHRMGSVRLFLI--FVCPPKGVRGRCRCPGR 58

Query: 450 TRLLLTLEDHRKTPGTRACRERSTLGGRASTVSP 349
           TRLLLTLEDHRK PGTRACRER T GGRAS   P
Sbjct: 59  TRLLLTLEDHRKKPGTRACRERRTRGGRASDQCP 92


>gb|ABE98744.1| hypothetical protein (mitochondrion) [Zea mays subsp. mays]
           gi|93116158|gb|ABE98789.1| hypothetical protein [Zea
           mays subsp. mays] gi|413954480|gb|AFW87129.1| putative
           uncharacterized protein orf127 [Zea mays]
          Length = 159

 Score =  143 bits (360), Expect = 6e-32
 Identities = 74/94 (78%), Positives = 76/94 (80%)
 Frame = -2

Query: 630 MARKGNPISVRLDLNRSSDPSRFSEGDRESNRMGSVFFFSLSHIFLKKKGVGGRCGCPGR 451
           MARKGNPISVRLDLNRSSDPSRFSEGDRES+RMGSV  F +       KGV GRC CPGR
Sbjct: 1   MARKGNPISVRLDLNRSSDPSRFSEGDRESHRMGSVRLFLI--FVCPPKGVRGRCRCPGR 58

Query: 450 TRLLLTLEDHRKTPGTRACRERSTLGGRASTVSP 349
           TRLLLTLEDHRK PGTRACRER T GGRAS   P
Sbjct: 59  TRLLLTLEDHRKKPGTRACRERRTRGGRASDQCP 92


>ref|XP_002513096.1| conserved hypothetical protein [Ricinus communis]
           gi|223548107|gb|EEF49599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 813

 Score =  117 bits (293), Expect = 3e-24
 Identities = 55/59 (93%), Positives = 56/59 (94%)
 Frame = +3

Query: 231 GRRGPGCASDRHIHRGVVARVSRPGILHLAFMISTFNCAPETRSKHARPVCFFHDMLWS 407
           GRRGPGCASDRH+  GVVARVSRPGILHLAFMISTF CAPETRSKHARPVCFFHDMLWS
Sbjct: 742 GRRGPGCASDRHM--GVVARVSRPGILHLAFMISTFRCAPETRSKHARPVCFFHDMLWS 798


>ref|XP_002529560.1| conserved hypothetical protein [Ricinus communis]
           gi|223530972|gb|EEF32829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 93

 Score =  110 bits (275), Expect = 4e-22
 Identities = 63/97 (64%), Positives = 68/97 (70%)
 Frame = -2

Query: 630 MARKGNPISVRLDLNRSSDPSRFSEGDRESNRMGSVFFFSLSHIFLKKKGVGGRCGCPGR 451
           MARKGNPISVRLDLNRSSD SRFSEGD ES++  +  F  L  I  KK+G        G 
Sbjct: 1   MARKGNPISVRLDLNRSSDSSRFSEGDCESHQKWASLF--LCPILKKKRG--RTLQMSGT 56

Query: 450 TRLLLTLEDHRKTPGTRACRERSTLGGRASTVSPGHS 340
                 +EDHR  PGTRACRERSTLGGRASTVSPGHS
Sbjct: 57  DTTSSNVEDHRNIPGTRACRERSTLGGRASTVSPGHS 93