BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012631
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...   298   4e-79
emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]   298   4e-79
ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi...   281   5e-74
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi...   277   9e-73
ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containi...   275   3e-72

>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  298 bits (763), Expect = 4e-79
 Identities = 138/186 (74%), Positives = 168/186 (90%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           L+DMY+KCGSIEKA+QVF+ LP+ NV+TW+ II GLAMHGRAKD LD+F  ME++GV PS
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVRVVGLKPRIEHYGCLVDLFGRAGLLEEAEKLI 360
           DV+YIG+L+ACSHAGLV+ G+++FD MVRV GL+PRIEHYGC+VDL GRAGLLEE+E+LI
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419

Query: 361 LSMTIKPDDVIWKALLGACKLHGHIEMGKRIAENLMELAPRDSGGYVALSNMYASLGDWG 540
           L+M IKPDDVIWKALLGACK+HG++EMGKR+AE+LMELAP DSG YVALSN+YASLG+W 
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 479

Query: 541 SVAETR 558
            VA+ R
Sbjct: 480 GVAKVR 485



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/144 (29%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           ++D Y + G +E A  +F  +PQ +V++WN +I G A  G  K+A++ F +M+ + V P+
Sbjct: 199 MIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPN 258

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVR-VVGLKPRIEHYGCLVDLFGRAGLLEEAEKL 357
            V+ + VL A S  G ++LGK+     VR  +G+   +     L+D++ + G +E+A ++
Sbjct: 259 YVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG--SALIDMYAKCGSIEKALQV 316

Query: 358 ILSMTIKPDDVIWKALLGACKLHG 429
              +  K + V W  ++    +HG
Sbjct: 317 FEGLP-KRNVVTWSTIIAGLAMHG 339


>emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
          Length = 613

 Score =  298 bits (763), Expect = 4e-79
 Identities = 138/186 (74%), Positives = 168/186 (90%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           L+DMY+KCGSIEKA+QVF+ LP+ NV+TW+ II GLAMHGRAKD LD+F  ME++GV PS
Sbjct: 277 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 336

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVRVVGLKPRIEHYGCLVDLFGRAGLLEEAEKLI 360
           DV+YIG+L+ACSHAGLV+ G+++FD MVRV GL+PRIEHYGC+VDL GRAGLLEE+E+LI
Sbjct: 337 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 396

Query: 361 LSMTIKPDDVIWKALLGACKLHGHIEMGKRIAENLMELAPRDSGGYVALSNMYASLGDWG 540
           L+M IKPDDVIWKALLGACK+HG++EMGKR+AE+LMELAP DSG YVALSN+YASLG+W 
Sbjct: 397 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 456

Query: 541 SVAETR 558
            VA+ R
Sbjct: 457 GVAKVR 462



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/144 (29%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           ++D Y + G +E A  +F  +PQ +V++WN +I G A  G  K+A++ F +M+ + V P+
Sbjct: 176 MIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPN 235

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVR-VVGLKPRIEHYGCLVDLFGRAGLLEEAEKL 357
            V+ + VL A S  G ++LGK+     VR  +G+   +     L+D++ + G +E+A ++
Sbjct: 236 YVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG--SALIDMYAKCGSIEKALQV 293

Query: 358 ILSMTIKPDDVIWKALLGACKLHG 429
              +  K + V W  ++    +HG
Sbjct: 294 FEGLP-KRNVVTWSTIIAGLAMHG 316


>ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  281 bits (719), Expect = 5e-74
 Identities = 132/186 (70%), Positives = 158/186 (84%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           LVDMY+KCGSIEKA+QVF+RLPQ NVITWNA+IGGLAMHG+A D  +Y S+MEK G+ PS
Sbjct: 307 LVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPS 366

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVRVVGLKPRIEHYGCLVDLFGRAGLLEEAEKLI 360
           DV+YI +L+ACSHAGLVD G+ +F+ MV  VGLKP+IEHYGC+VDL GRAG LEEAE+LI
Sbjct: 367 DVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELI 426

Query: 361 LSMTIKPDDVIWKALLGACKLHGHIEMGKRIAENLMELAPRDSGGYVALSNMYASLGDWG 540
           L+M +KPDDVIWKALLGA K+H +I++G R AE LM++AP DSG YVALSNMYAS G+W 
Sbjct: 427 LNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWD 486

Query: 541 SVAETR 558
            VA  R
Sbjct: 487 GVAAVR 492



 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 45/146 (30%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSG-VKP 177
           +VD Y++ G+++ A ++F R+ Q +V++WN +I G A +G  K+A++ F +M + G V P
Sbjct: 205 MVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLP 264

Query: 178 SDVSYIGVLAACSHAGLVDLGKFYFDQMVRVVGLKPRIEHY--GCLVDLFGRAGLLEEAE 351
           + V+ + VL A S  G+++LGK+     +     K RI+      LVD++ + G +E+A 
Sbjct: 265 NRVTLVSVLPAISRLGVLELGKWVH---LYAEKNKIRIDDVLGSALVDMYAKCGSIEKAI 321

Query: 352 KLILSMTIKPDDVIWKALLGACKLHG 429
           + +     + + + W A++G   +HG
Sbjct: 322 Q-VFERLPQNNVITWNAVIGGLAMHG 346


>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  277 bits (708), Expect = 9e-73
 Identities = 130/186 (69%), Positives = 161/186 (86%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           LVDMYSKCGSI+KA+QVF+ LP+ N ITW+AIIG  AMHGRA+DA+ +F  M K+GV P+
Sbjct: 311 LVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPN 370

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVRVVGLKPRIEHYGCLVDLFGRAGLLEEAEKLI 360
           DV+YIG+L+ACSHAGLV+ G+ +F  MV+VVGL+PRIEHYGC+VDL GRAG LEEAE+LI
Sbjct: 371 DVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELI 430

Query: 361 LSMTIKPDDVIWKALLGACKLHGHIEMGKRIAENLMELAPRDSGGYVALSNMYASLGDWG 540
            +M I+PDDVIWKALLGACK+H +++MG+R+AE LMELAP DSG YVALSN+YASLG+W 
Sbjct: 431 RNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWE 490

Query: 541 SVAETR 558
           +VA  R
Sbjct: 491 AVARVR 496


>ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  275 bits (704), Expect = 3e-72
 Identities = 129/186 (69%), Positives = 161/186 (86%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           LVDMYSKCGSI++A+QVF+ LP+ N ITW+AIIG  AMHGRA+DA+ +F  M K+GV P+
Sbjct: 311 LVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPN 370

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVRVVGLKPRIEHYGCLVDLFGRAGLLEEAEKLI 360
           DV+YIG+L+ACSHAGLV+ G+ +F  MV+VVGL+PRIEHYGC+VDL GRAG LEEAE+LI
Sbjct: 371 DVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELI 430

Query: 361 LSMTIKPDDVIWKALLGACKLHGHIEMGKRIAENLMELAPRDSGGYVALSNMYASLGDWG 540
            +M I+PDDVIWKALLGACK+H +++MG+R+AE LMELAP DSG YVALSN+YASLG+W 
Sbjct: 431 RNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWE 490

Query: 541 SVAETR 558
           +VA  R
Sbjct: 491 AVARVR 496



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/150 (29%), Positives = 85/150 (56%), Gaps = 4/150 (2%)
 Frame = +1

Query: 1   LVDMYSKCGSIEKAVQVFQRLPQTNVITWNAIIGGLAMHGRAKDALDYFSKMEKSGVKPS 180
           ++D   + G I+ A  +F  +PQ +V++WN +I G A +G   +A++ F +M+ S + P+
Sbjct: 210 MIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPN 269

Query: 181 DVSYIGVLAACSHAGLVDLGKFYFDQMVRVVGLKPRIE----HYGCLVDLFGRAGLLEEA 348
            V+ + VL A +  G ++LGK+     + +   K +IE        LVD++ + G ++EA
Sbjct: 270 YVTLVSVLPAIARIGALELGKW-----IHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEA 324

Query: 349 EKLILSMTIKPDDVIWKALLGACKLHGHIE 438
            ++  ++  K + + W A++GA  +HG  E
Sbjct: 325 LQVFETLP-KRNAITWSAIIGAFAMHGRAE 353