BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012626
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001078399.1| hyaluronan / mRNA binding domain-containing ...    71   8e-10
ref|NP_001078400.1| hyaluronan / mRNA binding domain-containing ...    71   8e-10
ref|NP_193416.1| hyaluronan / mRNA binding domain-containing pro...    71   8e-10
gb|AAM61393.1| nuclear antigen homolog [Arabidopsis thaliana]          71   8e-10
ref|XP_002870130.1| hypothetical protein ARALYDRAFT_493188 [Arab...    67   9e-09

>ref|NP_001078399.1| hyaluronan / mRNA binding domain-containing protein [Arabidopsis
            thaliana] gi|332658410|gb|AEE83810.1| hyaluronan / mRNA
            binding domain-containing protein [Arabidopsis thaliana]
          Length = 265

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
 Frame = +2

Query: 935  MTLNEYEKM---RKPVLSTKTTGERKVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKR 1099
            MTL+EYEK+   +K  L + TT ERKVD+K FESM+ L  KK N EIF+KLGS+KD  KR
Sbjct: 136  MTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD--KR 193

Query: 1100 KEDANSKADKVKKVSQ 1147
            K+D   KA K   +++
Sbjct: 194  KDDKEEKAKKAVSINE 209


>ref|NP_001078400.1| hyaluronan / mRNA binding domain-containing protein [Arabidopsis
            thaliana] gi|332658411|gb|AEE83811.1| hyaluronan / mRNA
            binding domain-containing protein [Arabidopsis thaliana]
          Length = 345

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
 Frame = +2

Query: 935  MTLNEYEKM---RKPVLSTKTTGERKVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKR 1099
            MTL+EYEK+   +K  L + TT ERKVD+K FESM+ L  KK N EIF+KLGS+KD  KR
Sbjct: 216  MTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD--KR 273

Query: 1100 KEDANSKADKVKKVSQ 1147
            K+D   KA K   +++
Sbjct: 274  KDDKEEKAKKAVSINE 289


>ref|NP_193416.1| hyaluronan / mRNA binding domain-containing protein [Arabidopsis
            thaliana] gi|6492264|gb|AAF14243.1|AF110227_1 nuclear RNA
            binding protein [Arabidopsis thaliana]
            gi|2245037|emb|CAB10456.1| nuclear antigen homolog
            [Arabidopsis thaliana] gi|7268434|emb|CAB80954.1| nuclear
            antigen homolog [Arabidopsis thaliana]
            gi|17380880|gb|AAL36252.1| putative nuclear antigen
            homolog [Arabidopsis thaliana] gi|20465929|gb|AAM20150.1|
            putative nuclear antigen-like protein [Arabidopsis
            thaliana] gi|22022571|gb|AAM83242.1| AT4g16830/dl4440w
            [Arabidopsis thaliana] gi|23308317|gb|AAN18128.1|
            At4g16830/dl4440w [Arabidopsis thaliana]
            gi|332658409|gb|AEE83809.1| hyaluronan / mRNA binding
            domain-containing protein [Arabidopsis thaliana]
          Length = 355

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
 Frame = +2

Query: 935  MTLNEYEKM---RKPVLSTKTTGERKVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKR 1099
            MTL+EYEK+   +K  L + TT ERKVD+K FESM+ L  KK N EIF+KLGS+KD  KR
Sbjct: 226  MTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD--KR 283

Query: 1100 KEDANSKADKVKKVSQ 1147
            K+D   KA K   +++
Sbjct: 284  KDDKEEKAKKAVSINE 299


>gb|AAM61393.1| nuclear antigen homolog [Arabidopsis thaliana]
          Length = 354

 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
 Frame = +2

Query: 935  MTLNEYEKM---RKPVLSTKTTGERKVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKR 1099
            MTL+EYEK+   +K  L + TT ERKVD+K FESM+ L  KK N EIF+KLGS+KD  KR
Sbjct: 225  MTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD--KR 282

Query: 1100 KEDANSKADKVKKVSQ 1147
            K+D   KA K   +++
Sbjct: 283  KDDKEEKAKKAVSINE 298


>ref|XP_002870130.1| hypothetical protein ARALYDRAFT_493188 [Arabidopsis lyrata subsp.
            lyrata] gi|297315966|gb|EFH46389.1| hypothetical protein
            ARALYDRAFT_493188 [Arabidopsis lyrata subsp. lyrata]
          Length = 358

 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
 Frame = +2

Query: 935  MTLNEYEKM---RKPVLSTKTTGERKVDSKGFESMKLL--KKGNHEIFVKLGSEKDGAKR 1099
            MTL+EYEK+   +K  L +  T ERKVD+K FESM+ L  KK N EIF+KLGS+KD  KR
Sbjct: 228  MTLDEYEKILEEKKKALQSLATSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKD--KR 285

Query: 1100 KEDANSKADKVKKVSQ 1147
            K++   KA K   +++
Sbjct: 286  KDEKEEKAKKAVSINE 301