BLASTX nr result

ID: Coptis21_contig00012623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012623
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF87016.1|AC005292_25 F26F24.14 [Arabidopsis thaliana]            100   9e-20
ref|NP_173744.1| MATE efflux family protein [Arabidopsis thalian...   100   9e-20
ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
gb|AFK46935.1| unknown [Medicago truncatula]                           99   3e-19

>gb|AAF87016.1|AC005292_25 F26F24.14 [Arabidopsis thaliana]
          Length = 536

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/67 (71%), Positives = 55/67 (82%)
 Frame = -3

Query: 202 TLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYGFAGQILRFLGQSPEIADLAGKF 23
           TLCGQAYGAG+L+MMGIY+QRSWIIL S  +LL L Y FA  +L  LGQSPEI+  AGKF
Sbjct: 108 TLCGQAYGAGQLEMMGIYLQRSWIILNSCALLLCLFYVFATPLLSLLGQSPEISKAAGKF 167

Query: 22  SIWMIPQ 2
           S+WMIPQ
Sbjct: 168 SLWMIPQ 174


>ref|NP_173744.1| MATE efflux family protein [Arabidopsis thaliana]
           gi|332192248|gb|AEE30369.1| MATE efflux family protein
           [Arabidopsis thaliana]
          Length = 515

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/67 (71%), Positives = 55/67 (82%)
 Frame = -3

Query: 202 TLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYGFAGQILRFLGQSPEIADLAGKF 23
           TLCGQAYGAG+L+MMGIY+QRSWIIL S  +LL L Y FA  +L  LGQSPEI+  AGKF
Sbjct: 108 TLCGQAYGAGQLEMMGIYLQRSWIILNSCALLLCLFYVFATPLLSLLGQSPEISKAAGKF 167

Query: 22  SIWMIPQ 2
           S+WMIPQ
Sbjct: 168 SLWMIPQ 174


>ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|222851587|gb|EEE89134.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/68 (64%), Positives = 57/68 (83%)
 Frame = -3

Query: 205 ETLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYGFAGQILRFLGQSPEIADLAGK 26
           ETLCGQAYGAG+LDM+G+YMQRSW+IL +  V+L+L+Y FAG  L+ +GQ+ EI+  AG 
Sbjct: 82  ETLCGQAYGAGQLDMLGLYMQRSWVILNATAVILTLLYIFAGPFLKLIGQTAEISQAAGM 141

Query: 25  FSIWMIPQ 2
           FS+WMIPQ
Sbjct: 142 FSVWMIPQ 149


>ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|222837995|gb|EEE76360.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/68 (64%), Positives = 57/68 (83%)
 Frame = -3

Query: 205 ETLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYGFAGQILRFLGQSPEIADLAGK 26
           ETLCGQAYGAG+LDM+G+YMQRSW+IL +  V+L+L+Y FAG  L+ +GQ+ EI+  AG 
Sbjct: 119 ETLCGQAYGAGQLDMLGLYMQRSWVILNATAVILTLLYIFAGPFLKLIGQTAEISQAAGM 178

Query: 25  FSIWMIPQ 2
           FS+WMIPQ
Sbjct: 179 FSVWMIPQ 186


>gb|AFK46935.1| unknown [Medicago truncatula]
          Length = 517

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/68 (67%), Positives = 57/68 (83%)
 Frame = -3

Query: 205 ETLCGQAYGAGKLDMMGIYMQRSWIILFSAGVLLSLVYGFAGQILRFLGQSPEIADLAGK 26
           ETLCGQA GAGKLDM+GIYMQRSW+ILFS    L L+Y FAG IL+F+GQ+ EI++ AG 
Sbjct: 120 ETLCGQAVGAGKLDMLGIYMQRSWVILFSMAFPLCLLYIFAGSILKFIGQTTEISEAAGT 179

Query: 25  FSIWMIPQ 2
           F+++MIPQ
Sbjct: 180 FALYMIPQ 187


Top