BLASTX nr result

ID: Coptis21_contig00012621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012621
         (1645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281478.1| PREDICTED: trafficking protein particle comp...   499   e-139
ref|XP_002281520.1| PREDICTED: trafficking protein particle comp...   499   e-138
emb|CAN78542.1| hypothetical protein VITISV_007618 [Vitis vinifera]   499   e-138
emb|CAN76030.1| hypothetical protein VITISV_029132 [Vitis vinifera]   499   e-138
ref|XP_004143481.1| PREDICTED: trafficking protein particle comp...   490   e-136

>ref|XP_002281478.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Vitis vinifera]
          Length = 373

 Score =  499 bits (1285), Expect = e-139
 Identities = 255/368 (69%), Positives = 296/368 (80%), Gaps = 4/368 (1%)
 Frame = -2

Query: 1542 SNHSTPKP---TITDPLTTQFTSLSSLCFDITTLQDLAFRGSWRSILEKITHARKLSLLT 1372
            S  STP       +DPL++ F SL+ LC+++++LQ+LA RGSWRSIL+K++ ARKLSLL 
Sbjct: 7    SEDSTPAADGFVASDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQ 66

Query: 1371 KPHEHLIYLTYNVLALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMIPFA 1192
            KPHEHL Y +YNVLAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSMIPFA
Sbjct: 67   KPHEHLCYFSYNVLALIKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFA 126

Query: 1191 LRWIHAEIPVKLGKRQETLDRLYILLDFVKLKLNEKEKDGLDVCGGQWKKREEFVISSIL 1012
            LRWIHAEIP+KLGKRQETLDRLY LLDF + +++EK   GL V    WK+RE FV++SI+
Sbjct: 127  LRWIHAEIPLKLGKRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSII 186

Query: 1011 SHHLNNKEFGVCXXXXXXXXXXNA-DDPVLLSKLGYIQMQLGDLEGSKVSFNRVESLMKE 835
             HHL++KEFGVC             DDP L+SKLG IQ+Q+GDLEG+K SF  VE + KE
Sbjct: 187  GHHLSHKEFGVCVSLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKE 246

Query: 834  GTGNVVLSEIGFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMY 655
                  LSEI FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMY
Sbjct: 247  ERLG-SLSEIEFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMY 305

Query: 654  LRDLPDSIKVLENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDD 475
            LRDL DSIKVLENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDD
Sbjct: 306  LRDLSDSIKVLENALERVPTIALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDD 365

Query: 474  FDSSCTRV 451
            FDSSCTR+
Sbjct: 366  FDSSCTRI 373


>ref|XP_002281520.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Vitis vinifera]
          Length = 373

 Score =  499 bits (1284), Expect = e-138
 Identities = 255/368 (69%), Positives = 296/368 (80%), Gaps = 4/368 (1%)
 Frame = -2

Query: 1542 SNHSTPKPT---ITDPLTTQFTSLSSLCFDITTLQDLAFRGSWRSILEKITHARKLSLLT 1372
            S  STP       +DPL++ F SL+ LC+++++LQ+LA RGSWRSIL+K++ ARKLSLL 
Sbjct: 7    SEDSTPAADGFIASDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQ 66

Query: 1371 KPHEHLIYLTYNVLALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMIPFA 1192
            KPHEHL Y +YNVLAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSMIPFA
Sbjct: 67   KPHEHLCYFSYNVLALIKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFA 126

Query: 1191 LRWIHAEIPVKLGKRQETLDRLYILLDFVKLKLNEKEKDGLDVCGGQWKKREEFVISSIL 1012
            LRWIHAEIP+KLGKRQETLDRLY LLDF + +++EK   GL V    WK+RE FV++SI+
Sbjct: 127  LRWIHAEIPLKLGKRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSII 186

Query: 1011 SHHLNNKEFGVCXXXXXXXXXXNA-DDPVLLSKLGYIQMQLGDLEGSKVSFNRVESLMKE 835
             HHL++KEFGVC             DDP L+SKLG IQ+Q+GDLEG+K SF  VE + KE
Sbjct: 187  GHHLSHKEFGVCVSLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKE 246

Query: 834  GTGNVVLSEIGFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMY 655
                  LSEI FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMY
Sbjct: 247  ERLG-SLSEIEFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMY 305

Query: 654  LRDLPDSIKVLENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDD 475
            LRDL DSIKVLENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDD
Sbjct: 306  LRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDD 365

Query: 474  FDSSCTRV 451
            FDSSCTR+
Sbjct: 366  FDSSCTRI 373


>emb|CAN78542.1| hypothetical protein VITISV_007618 [Vitis vinifera]
          Length = 373

 Score =  499 bits (1284), Expect = e-138
 Identities = 255/368 (69%), Positives = 296/368 (80%), Gaps = 4/368 (1%)
 Frame = -2

Query: 1542 SNHSTPKPT---ITDPLTTQFTSLSSLCFDITTLQDLAFRGSWRSILEKITHARKLSLLT 1372
            S  STP       +DPL++ F SL+ LC+++++LQ+LA RGSWRSIL+K++ ARKLSLL 
Sbjct: 7    SEDSTPAADGFXASDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQ 66

Query: 1371 KPHEHLIYLTYNVLALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMIPFA 1192
            KPHEHL Y +YNVLAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSMIPFA
Sbjct: 67   KPHEHLCYFSYNVLALXKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFA 126

Query: 1191 LRWIHAEIPVKLGKRQETLDRLYILLDFVKLKLNEKEKDGLDVCGGQWKKREEFVISSIL 1012
            LRWIHAEIP+KLGKRQETLDRLY LLDF + +++EK   GL V    WK+RE FV++SI+
Sbjct: 127  LRWIHAEIPLKLGKRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSII 186

Query: 1011 SHHLNNKEFGVCXXXXXXXXXXNA-DDPVLLSKLGYIQMQLGDLEGSKVSFNRVESLMKE 835
             HHL++KEFGVC             DDP L+SKLG IQ+Q+GDLEG+K SF  VE + KE
Sbjct: 187  GHHLSHKEFGVCVSLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKE 246

Query: 834  GTGNVVLSEIGFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMY 655
                  LSEI FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMY
Sbjct: 247  ERLG-SLSEIEFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMY 305

Query: 654  LRDLPDSIKVLENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDD 475
            LRDL DSIKVLENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDD
Sbjct: 306  LRDLSDSIKVLENALERVPTIALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDD 365

Query: 474  FDSSCTRV 451
            FDSSCTR+
Sbjct: 366  FDSSCTRI 373


>emb|CAN76030.1| hypothetical protein VITISV_029132 [Vitis vinifera]
          Length = 373

 Score =  499 bits (1284), Expect = e-138
 Identities = 255/368 (69%), Positives = 296/368 (80%), Gaps = 4/368 (1%)
 Frame = -2

Query: 1542 SNHSTPKPT---ITDPLTTQFTSLSSLCFDITTLQDLAFRGSWRSILEKITHARKLSLLT 1372
            S  STP       +DPL++ F SL+ LC+++++LQ+LA RGSWRSIL+K++ ARKLSLL 
Sbjct: 7    SEDSTPAADGFIASDPLSSPFGSLNDLCYELSSLQELATRGSWRSILDKVSRARKLSLLQ 66

Query: 1371 KPHEHLIYLTYNVLALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPGLSGSMIPFA 1192
            KPHEHL Y +YNVLAL KLR+Y + SEEL +LEDLD   Y+YES  D YPG SGSMIPFA
Sbjct: 67   KPHEHLCYFSYNVLALIKLRRYGDVSEELASLEDLDHSIYQYESHPDVYPGRSGSMIPFA 126

Query: 1191 LRWIHAEIPVKLGKRQETLDRLYILLDFVKLKLNEKEKDGLDVCGGQWKKREEFVISSIL 1012
            LRWIHAEIP+KLGKRQETLDRLY LLDF + +++EK   GL V    WK+RE FV++SI+
Sbjct: 127  LRWIHAEIPLKLGKRQETLDRLYTLLDFARTRVDEKGSRGLGVSADVWKRREVFVVNSII 186

Query: 1011 SHHLNNKEFGVCXXXXXXXXXXNA-DDPVLLSKLGYIQMQLGDLEGSKVSFNRVESLMKE 835
             HHL++KEFGVC             DDP L+SKLG IQ+Q+GDLEG+K SF  VE + KE
Sbjct: 187  GHHLSHKEFGVCVSLIRQLLSGRCRDDPALVSKLGCIQLQIGDLEGAKASFELVEKMGKE 246

Query: 834  GTGNVVLSEIGFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVNNKALCLMY 655
                  LSEI FKNLVNRNKAL+YLVGKDYVSAVREYEECIERD  D+VA+NNKALCLMY
Sbjct: 247  ERLG-SLSEIEFKNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVAINNKALCLMY 305

Query: 654  LRDLPDSIKVLENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNWIARVAPDD 475
            LRDL DSIKVLENALERVPT ALNET+VVNLCSMYELAYVNHS+IK+TLSNWIARVAPDD
Sbjct: 306  LRDLSDSIKVLENALERVPTXALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDD 365

Query: 474  FDSSCTRV 451
            FDSSCTR+
Sbjct: 366  FDSSCTRI 373


>ref|XP_004143481.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Cucumis sativus]
          Length = 387

 Score =  490 bits (1262), Expect = e-136
 Identities = 248/376 (65%), Positives = 295/376 (78%), Gaps = 11/376 (2%)
 Frame = -2

Query: 1545 SSNHSTPKP-TIT----------DPLTTQFTSLSSLCFDITTLQDLAFRGSWRSILEKIT 1399
            S +HST  P T+T          DPLTTQF SL+ L  D+ +LQDLA RGSWRSIL+K+ 
Sbjct: 12   SHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATRGSWRSILDKVA 71

Query: 1398 HARKLSLLTKPHEHLIYLTYNVLALTKLRKYLEASEELDTLEDLDSIRYKYESFHDSYPG 1219
             AR L+LL KPH+HL YL+YNVLAL KLR++ EA  ELD+LEDL+S +Y+YES+   YP 
Sbjct: 72   RARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYRYESYPSVYPN 131

Query: 1218 LSGSMIPFALRWIHAEIPVKLGKRQETLDRLYILLDFVKLKLNEKEKDGLDVCGGQWKKR 1039
             +GSM+PF+LRW+ A IP+K+G+RQ  LDR Y LLDFV+ KL +KE+  LDV    WKKR
Sbjct: 132  RTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKKLDVSVNLWKKR 191

Query: 1038 EEFVISSILSHHLNNKEFGVCXXXXXXXXXXNADDPVLLSKLGYIQMQLGDLEGSKVSFN 859
              FVI+ I+ HHL+NKEFGVC          +  DP L+SKLGYIQM  GD+EG+K SFN
Sbjct: 192  VVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAGDIEGAKRSFN 251

Query: 858  RVESLMKEGTGNVVLSEIGFKNLVNRNKALIYLVGKDYVSAVREYEECIERDAKDIVAVN 679
            R+E L+KEG  +  LSE+  KNLVNRNKAL++LVGKDY+SAVREYEECIERD  D+VA+N
Sbjct: 252  RIEELVKEGKSSGSLSEVEMKNLVNRNKALVFLVGKDYLSAVREYEECIERDNSDMVAIN 311

Query: 678  NKALCLMYLRDLPDSIKVLENALERVPTYALNETVVVNLCSMYELAYVNHSEIKKTLSNW 499
            NKALCLMYLRDL DSIKVLENALERVPT ALNETV+VNLCSMYELAYVNHSEIK+TL+NW
Sbjct: 312  NKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSEIKRTLNNW 371

Query: 498  IARVAPDDFDSSCTRV 451
            IARVAPDDFDSS TR+
Sbjct: 372  IARVAPDDFDSSSTRI 387


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