BLASTX nr result
ID: Coptis21_contig00012620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012620
(1020 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2... 154 3e-35
emb|CBI26021.3| unnamed protein product [Vitis vinifera] 93 1e-16
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera] 92 2e-16
ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group] g... 82 2e-13
gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indi... 82 2e-13
>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
predicted protein [Populus trichocarpa]
Length = 426
Score = 154 bits (389), Expect = 3e-35
Identities = 83/181 (45%), Positives = 104/181 (57%)
Frame = -3
Query: 1018 SPRWRYLCTAPSNLHFDLLSIFGITYDPRYRDEISNTLWEGKLKFVRAVDQFLQLCTSPK 839
S RWRYL S+L FD+ ++FG T E KFV AVDQ L C PK
Sbjct: 32 SHRWRYLSPPLSHLQFDVFTLFG-------------THGESSSKFVTAVDQVLLACRGPK 78
Query: 838 IYSFEVWYCLGSESACHIDRWVSFAIRKQTKELCLNFSLVPQSCELYNFPCHLLPQGKAC 659
I + +V + LG + A H+DRWVSF+ Q +++ +FS P+SC YNFPCH+LP KA
Sbjct: 79 IGTVKVRFGLGDDHAFHVDRWVSFSSAMQVEKIAFDFSCSPKSCGSYNFPCHILPADKAS 138
Query: 658 QLKHLSLKSCVLKPSPDFANCLNSLTKLRLNNVPLDQSDFSNILSGCVNLEFLKLKKCSL 479
LKHL L SC L+ SP F + LN L L L+ VPLDQS I S C L L++ C L
Sbjct: 139 HLKHLCLVSCTLRLSPKFTSQLNPLRTLDLDGVPLDQSGLDIITSACPKLTLLRMIGCGL 198
Query: 478 P 476
P
Sbjct: 199 P 199
Score = 61.6 bits (148), Expect = 3e-07
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Frame = -2
Query: 305 IDISCINLTTLDFFGKLHKLRFIDVPLLKDVFVYPSF----KDSIFNGPADDLPQIRNLK 138
+++ INL +FFG KL F+DVP LK V F I N A DLPQ++ L
Sbjct: 223 VELKSINLEIFEFFGHPRKLTFVDVPHLKKALVRSLFIYRRTSPICNALAKDLPQLQFL- 281
Query: 137 QVLFVARVRPIPANMTRFRHLIKLDLIVFLIKFFNLLSVAFILNA 3
++ V P+PA +F L +LDL+++ +LL+V ++LNA
Sbjct: 282 SLIVKDEVLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNA 326
>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 92.8 bits (229), Expect = 1e-16
Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Frame = -3
Query: 1018 SPRWRYLCTAPSNLHFDLLSIFGI----TYDPRYRDEISNTLWEGKLKFVRAVDQFLQLC 851
S RWR + T S L FD S+ GI T + E+++ + K FV VDQF+
Sbjct: 45 SKRWRSIWTCHSELWFDAASVLGIGDCSTSMSGNQPELNSQMQSSK--FVERVDQFMYYR 102
Query: 850 TSP-KIYSFEVWYCLGSESACHIDRWVSFAIRKQTKELCLNFS-----------LVPQSC 707
+ KI SF + + LG E HID+W++ A+ K + + L+ S +
Sbjct: 103 SQGRKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAF 162
Query: 706 ELYNFPCHLLP-QGKACQLKHLSLKSCVLKPSPDFANCLNSLTKLRLNNVPLDQSDFSNI 530
++Y FPC L G C LKHL L SC L P +N L SL + L V + ++
Sbjct: 163 QIYEFPCRLFSVPGGRCTLKHLRLASCHLSALPS-SNTLTSLITVDLQRVNISDQQLQDL 221
Query: 529 LSGCVNLEFLKLKKCS 482
LS C +LE+L L C+
Sbjct: 222 LSTCSHLEWLSLCVCN 237
>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
Length = 1789
Score = 92.4 bits (228), Expect = 2e-16
Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Frame = -3
Query: 1018 SPRWRYLCTAPSNLHFDLLSIFGIT--------YDPRYRDEISNTLWEGKLKFVRAVDQF 863
S RWR + T S L FD S+ GI P ++ + KFV VDQF
Sbjct: 1347 SKRWRSIWTCHSELWFDAASVLGIGDCSXSMSGNQPELNSQMQSX------KFVERVDQF 1400
Query: 862 LQLCTS-PKIYSFEVWYCLGSESACHIDRWVSFAIRKQTKELCLNFS-----------LV 719
+ + PKI SF + + LG E HID+W++ A+ K + + L+ S
Sbjct: 1401 MYYRSQGPKINSFSIHFPLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTS 1460
Query: 718 PQSCELYNFPCHLLP-QGKACQLKHLSLKSCVLKPSPDFANCLNSLTKLRLNNVPLDQSD 542
+ ++Y FPC L G C LKHL L SC L P +N L SL + L V +
Sbjct: 1461 STAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALPS-SNTLTSLITVDLQRVNISDQQ 1519
Query: 541 FSNILSGCVNLEFLKLKKCS 482
++LS C +LE L L C+
Sbjct: 1520 LQDLLSTCSHLERLSLCVCN 1539
>ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group] gi|77553566|gb|ABA96362.1|
F-box domain containing protein, expressed [Oryza sativa
Japonica Group] gi|125578377|gb|EAZ19523.1| hypothetical
protein OsJ_35088 [Oryza sativa Japonica Group]
gi|255670007|dbj|BAH95498.1| Os12g0127400 [Oryza sativa
Japonica Group]
Length = 358
Score = 82.4 bits (202), Expect = 2e-13
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Frame = -3
Query: 1018 SPRWRYLCTAPSNLHFDLLSIFGITYDPRYRDEISNTLWEGKLKFVRAVDQFLQLCTSPK 839
S WR T NL+F + ++ G + N KF++ VD L+
Sbjct: 88 STNWRQAWTFHPNLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGTM 147
Query: 838 IYSFEVWYCLGSESACHIDRWVSFAIRKQTKELCLNFSLVPQSCE-LYNFPCHLLPQGKA 662
+ F V + L +E A H++ WV+FAI + + + L+FS +S E Y+FPCH+ +
Sbjct: 148 VNKFAVKFGLSNEHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHNG 207
Query: 661 CQLKHLSLKSCVLKPSPDFANCLNSLTKLRLNNVPLDQSDFSNILSGCVNLEFLKLKKCS 482
L+ L L S L P DF N L L L+NV L ++S C LE+L ++ C+
Sbjct: 208 SYLEALRLDSVTLNPPLDFCGFAN-LKLLALDNVRLQH--LEQLISKCHVLEWLSIQSCN 264
>gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indica Group]
Length = 446
Score = 82.4 bits (202), Expect = 2e-13
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Frame = -3
Query: 1018 SPRWRYLCTAPSNLHFDLLSIFGITYDPRYRDEISNTLWEGKLKFVRAVDQFLQLCTSPK 839
S WR T NL+F + ++ G + N KF++ VD L+
Sbjct: 88 STNWRQAWTFHPNLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGTM 147
Query: 838 IYSFEVWYCLGSESACHIDRWVSFAIRKQTKELCLNFSLVPQSCE-LYNFPCHLLPQGKA 662
+ F V + L +E A H++ WV+FAI + + + L+FS +S E Y+FPCH+ +
Sbjct: 148 VNKFAVKFGLSNEHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHNG 207
Query: 661 CQLKHLSLKSCVLKPSPDFANCLNSLTKLRLNNVPLDQSDFSNILSGCVNLEFLKLKKCS 482
L+ L L S L P DF N L L L+NV L ++S C LE+L ++ C+
Sbjct: 208 SYLEALRLDSVTLNPPLDFCGFAN-LKLLALDNVRLQH--LEQLISKCHVLEWLSIQSCN 264