BLASTX nr result

ID: Coptis21_contig00012607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012607
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237046.1| uncharacterized protein LOC100527252 [Glycin...   372   e-100
ref|XP_002273101.1| PREDICTED: vesicle-associated membrane prote...   370   e-100
ref|XP_003533403.1| PREDICTED: vesicle-associated membrane prote...   369   e-100
gb|ACJ84394.1| unknown [Medicago truncatula] gi|388518109|gb|AFK...   368   2e-99
gb|AFK38247.1| unknown [Lotus japonicus]                              368   2e-99

>ref|NP_001237046.1| uncharacterized protein LOC100527252 [Glycine max]
            gi|255631884|gb|ACU16309.1| unknown [Glycine max]
          Length = 221

 Score =  372 bits (954), Expect = e-100
 Identities = 182/221 (82%), Positives = 197/221 (89%)
 Frame = -1

Query: 1146 MSQESFIYSFVARGTMILAEYTEFTGNFPAIANQCLQKLPSSNNKFTYTCDHHTFNFLVQ 967
            MSQESFIYSFVARGTM+LAEYTEFTGNFPAIA QCLQKLPSSNNKFTY CDHHTFNFLV+
Sbjct: 1    MSQESFIYSFVARGTMVLAEYTEFTGNFPAIAAQCLQKLPSSNNKFTYNCDHHTFNFLVE 60

Query: 966  DGYAYCVVAKESAGKQVSIAFLERLREDFKKRYGGGKADTAIAKSLNKEFGPVMKEHMQY 787
            DGYAYCVVAKES  KQ+SIAFLER++ DFKKRYGGGKADTAIAKSLNKEFGPVMKEHM+Y
Sbjct: 61   DGYAYCVVAKESVSKQISIAFLERVKADFKKRYGGGKADTAIAKSLNKEFGPVMKEHMKY 120

Query: 786  IIDHAEEIGKLSKVKAQVSEVKSIMLENIDKALDRGERLDILAEKTEDLRSQAQEFKKQG 607
            IIDHAEEI KL KV+AQVSEVKSIMLENIDKA+DRGE L ILA+KTE LRSQAQ+F+KQG
Sbjct: 121  IIDHAEEIVKLIKVEAQVSEVKSIMLENIDKAIDRGENLTILADKTETLRSQAQDFRKQG 180

Query: 606  TQVRRKMWFKNMKIKXXXXXXXXXXXXXIWVSVCNGFDCTN 484
            TQVRRKMW++NMKIK             IW+S+C GFDCTN
Sbjct: 181  TQVRRKMWYQNMKIKLVVLGILLFLVLVIWLSICGGFDCTN 221


>ref|XP_002273101.1| PREDICTED: vesicle-associated membrane protein 724 isoform 1 [Vitis
            vinifera] gi|297736869|emb|CBI26070.3| unnamed protein
            product [Vitis vinifera]
          Length = 221

 Score =  370 bits (950), Expect = e-100
 Identities = 180/220 (81%), Positives = 197/220 (89%)
 Frame = -1

Query: 1146 MSQESFIYSFVARGTMILAEYTEFTGNFPAIANQCLQKLPSSNNKFTYTCDHHTFNFLVQ 967
            MSQESFIYSFVARGTM+LAEYTEFTGNFPAIA QCLQ+LPS+NNKFTY CDHHTFNFLV+
Sbjct: 1    MSQESFIYSFVARGTMVLAEYTEFTGNFPAIATQCLQRLPSANNKFTYNCDHHTFNFLVE 60

Query: 966  DGYAYCVVAKESAGKQVSIAFLERLREDFKKRYGGGKADTAIAKSLNKEFGPVMKEHMQY 787
            DGYAYCVVAKES GKQVSIAFLER++ DFKKRYGGGKADTA AKSLNK+FGP+MKEHMQY
Sbjct: 61   DGYAYCVVAKESVGKQVSIAFLERMKADFKKRYGGGKADTATAKSLNKDFGPIMKEHMQY 120

Query: 786  IIDHAEEIGKLSKVKAQVSEVKSIMLENIDKALDRGERLDILAEKTEDLRSQAQEFKKQG 607
            IIDHAEEI KL KVKAQVSEVKSIMLENIDK L+RGE L ILA+KTEDLRSQAQ+FKKQG
Sbjct: 121  IIDHAEEIEKLLKVKAQVSEVKSIMLENIDKTLERGENLTILADKTEDLRSQAQQFKKQG 180

Query: 606  TQVRRKMWFKNMKIKXXXXXXXXXXXXXIWVSVCNGFDCT 487
            +QVRRKMWF+NMKIK             IWVS+C+GF+C+
Sbjct: 181  SQVRRKMWFQNMKIKLVVLGILLILALVIWVSICHGFNCS 220


>ref|XP_003533403.1| PREDICTED: vesicle-associated membrane protein 724-like [Glycine max]
          Length = 223

 Score =  369 bits (948), Expect = e-100
 Identities = 182/221 (82%), Positives = 196/221 (88%)
 Frame = -1

Query: 1146 MSQESFIYSFVARGTMILAEYTEFTGNFPAIANQCLQKLPSSNNKFTYTCDHHTFNFLVQ 967
            MSQESFIYSFVARGTM+LAEYTEFTGNFPAIA QCLQKLPSSNNKFTY CDHHTFNFLV+
Sbjct: 1    MSQESFIYSFVARGTMLLAEYTEFTGNFPAIAAQCLQKLPSSNNKFTYNCDHHTFNFLVE 60

Query: 966  DGYAYCVVAKESAGKQVSIAFLERLREDFKKRYGGGKADTAIAKSLNKEFGPVMKEHMQY 787
            DGYAYCVVAKES  KQ+SIAFLER++ DFKKRYGGGKADTAIAKSLNKEFGPVMKEHM+Y
Sbjct: 61   DGYAYCVVAKESVSKQISIAFLERVKADFKKRYGGGKADTAIAKSLNKEFGPVMKEHMKY 120

Query: 786  IIDHAEEIGKLSKVKAQVSEVKSIMLENIDKALDRGERLDILAEKTEDLRSQAQEFKKQG 607
            II+HAEEI KL KVKAQVSEVKSIMLENIDKALDRGE L ILA+KTE LRS AQ+F+KQG
Sbjct: 121  IINHAEEIVKLIKVKAQVSEVKSIMLENIDKALDRGENLTILADKTEALRSHAQDFRKQG 180

Query: 606  TQVRRKMWFKNMKIKXXXXXXXXXXXXXIWVSVCNGFDCTN 484
            TQVRRKMW++NMKIK             IW+S+C GFDCTN
Sbjct: 181  TQVRRKMWYQNMKIKLVVLGILLVLVLVIWLSICGGFDCTN 221


>gb|ACJ84394.1| unknown [Medicago truncatula] gi|388518109|gb|AFK47116.1| unknown
            [Medicago truncatula]
          Length = 221

 Score =  368 bits (945), Expect = 2e-99
 Identities = 178/221 (80%), Positives = 198/221 (89%)
 Frame = -1

Query: 1146 MSQESFIYSFVARGTMILAEYTEFTGNFPAIANQCLQKLPSSNNKFTYTCDHHTFNFLVQ 967
            MSQESFIYSFVARGTM+LAEYTEFTGNFPAIA QCLQKLPSSNNKFTY+CDHHTFNFLV+
Sbjct: 1    MSQESFIYSFVARGTMVLAEYTEFTGNFPAIAAQCLQKLPSSNNKFTYSCDHHTFNFLVE 60

Query: 966  DGYAYCVVAKESAGKQVSIAFLERLREDFKKRYGGGKADTAIAKSLNKEFGPVMKEHMQY 787
            DGYAYCVVAKES  KQ+SIAFLER++ DFKKRYGGGKADTAIAKSLNKEFGPVMKEHM+Y
Sbjct: 61   DGYAYCVVAKESVSKQISIAFLERVKADFKKRYGGGKADTAIAKSLNKEFGPVMKEHMKY 120

Query: 786  IIDHAEEIGKLSKVKAQVSEVKSIMLENIDKALDRGERLDILAEKTEDLRSQAQEFKKQG 607
            IIDHAEEI KL KVKAQVSEVKSIMLENIDKA+DRGE L +L++KTE LR+QAQ+F+KQG
Sbjct: 121  IIDHAEEIEKLLKVKAQVSEVKSIMLENIDKAIDRGENLSVLSDKTETLRAQAQDFRKQG 180

Query: 606  TQVRRKMWFKNMKIKXXXXXXXXXXXXXIWVSVCNGFDCTN 484
            TQVRRKMW++NMKIK             IW+S+C GF+C+N
Sbjct: 181  TQVRRKMWYQNMKIKLVVLGILLFLVLVIWLSICGGFNCSN 221


>gb|AFK38247.1| unknown [Lotus japonicus]
          Length = 221

 Score =  368 bits (944), Expect = 2e-99
 Identities = 179/221 (80%), Positives = 196/221 (88%)
 Frame = -1

Query: 1146 MSQESFIYSFVARGTMILAEYTEFTGNFPAIANQCLQKLPSSNNKFTYTCDHHTFNFLVQ 967
            MSQESFIYSFVARGTM+LAEYTEFTGNFPAIA QCLQKL SSNNKFTY CDHHTFNFLV+
Sbjct: 1    MSQESFIYSFVARGTMVLAEYTEFTGNFPAIAAQCLQKLTSSNNKFTYNCDHHTFNFLVE 60

Query: 966  DGYAYCVVAKESAGKQVSIAFLERLREDFKKRYGGGKADTAIAKSLNKEFGPVMKEHMQY 787
            DGYAYCVVAKES  KQ+SIAFLER++ DFKKRYGGGKADTA+AKSLNKEFGPVMKEHM+Y
Sbjct: 61   DGYAYCVVAKESVSKQISIAFLERVKADFKKRYGGGKADTAVAKSLNKEFGPVMKEHMKY 120

Query: 786  IIDHAEEIGKLSKVKAQVSEVKSIMLENIDKALDRGERLDILAEKTEDLRSQAQEFKKQG 607
            IIDHAEEI KL KVKAQVSEVKSIMLENIDKA+DRGE + ILA+KTE LRSQAQ+F+KQG
Sbjct: 121  IIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENMTILADKTETLRSQAQDFRKQG 180

Query: 606  TQVRRKMWFKNMKIKXXXXXXXXXXXXXIWVSVCNGFDCTN 484
            TQVRRKMW++NMKIK             IW+S+C GFDC+N
Sbjct: 181  TQVRRKMWYQNMKIKLVVFGILLFLVLVIWLSICGGFDCSN 221


Top