BLASTX nr result
ID: Coptis21_contig00012603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012603
(1279 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528801.1| ubiquitin-protein ligase, putative [Ricinus ... 106 2e-28
ref|XP_002279666.1| PREDICTED: uncharacterized protein LOC100265... 100 4e-26
emb|CBI33972.3| unnamed protein product [Vitis vinifera] 100 4e-26
ref|XP_002329543.1| predicted protein [Populus trichocarpa] gi|2... 99 8e-26
ref|XP_002326695.1| predicted protein [Populus trichocarpa] gi|2... 94 8e-25
>ref|XP_002528801.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223531804|gb|EEF33623.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 219
Score = 106 bits (264), Expect(2) = 2e-28
Identities = 55/76 (72%), Positives = 60/76 (78%)
Frame = +3
Query: 435 QGEHLRRTLAERRQTHYRALLSVAEETAIKRLREKEDEVEKAIRRNNELEQRVAQMRIEA 614
QGE LRRTLAE+RQ HYRALLS AEE+ RLREKE EVEKA RRN+ELE R AQ+ +EA
Sbjct: 41 QGEQLRRTLAEKRQRHYRALLSAAEESISMRLREKEAEVEKATRRNSELEARAAQLSVEA 100
Query: 615 QAWANKARNQETVAAS 662
Q W KAR QET AAS
Sbjct: 101 QVWQAKARAQETAAAS 116
Score = 47.4 bits (111), Expect(2) = 2e-28
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +1
Query: 301 EDVHTQIKQQRDEIDHFLQLQGEHLRR 381
ED TQIK+QRDEIDHFLQ QGE LRR
Sbjct: 21 EDFATQIKRQRDEIDHFLQAQGEQLRR 47
Score = 69.3 bits (168), Expect = 2e-09
Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 4/51 (7%)
Frame = +2
Query: 812 EEGVGCSGNGG---EADDAESAHVDPERV-LSSGPSCKACRKRVASVVLLP 952
++G+GCSG GG +A+DAESA+VDPERV +S GP+CK CRKR A+VV+LP
Sbjct: 140 DDGLGCSGGGGIEGQAEDAESAYVDPERVTVSGGPTCKGCRKRAATVVVLP 190
>ref|XP_002279666.1| PREDICTED: uncharacterized protein LOC100265998 [Vitis vinifera]
Length = 337
Score = 99.8 bits (247), Expect(2) = 4e-26
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = +3
Query: 435 QGEHLRRTLAERRQTHYRALLSVAEETAIKRLREKEDEVEKAIRRNNELEQRVAQMRIEA 614
QGE LRRTLAE+RQ HYRALL AEE+ +RLREKE EVEKA R N ELE R AQ+ +EA
Sbjct: 155 QGEQLRRTLAEKRQRHYRALLGAAEESVARRLREKEAEVEKAARCNAELEARAAQLSMEA 214
Query: 615 QAWANKARNQETVAAS 662
Q W KAR QE AAS
Sbjct: 215 QVWQAKARAQEATAAS 230
Score = 45.8 bits (107), Expect(2) = 4e-26
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +1
Query: 289 SILSEDVHTQIKQQRDEIDHFLQLQGEHLRR 381
S+LSED QIK QRDEID FL+ QGE LRR
Sbjct: 131 SLLSEDFTAQIKHQRDEIDQFLRAQGEQLRR 161
Score = 75.1 bits (183), Expect = 4e-11
Identities = 37/53 (69%), Positives = 43/53 (81%), Gaps = 6/53 (11%)
Frame = +2
Query: 812 EEGVGCS------GNGGEADDAESAHVDPERVLSSGPSCKACRKRVASVVLLP 952
EEG+GC+ G G+A+DAESA++DPERV SSGP CKACRKRVASVVLLP
Sbjct: 252 EEGLGCAVGAEGGGCSGQAEDAESAYIDPERVKSSGPMCKACRKRVASVVLLP 304
>emb|CBI33972.3| unnamed protein product [Vitis vinifera]
Length = 314
Score = 99.8 bits (247), Expect(2) = 4e-26
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = +3
Query: 435 QGEHLRRTLAERRQTHYRALLSVAEETAIKRLREKEDEVEKAIRRNNELEQRVAQMRIEA 614
QGE LRRTLAE+RQ HYRALL AEE+ +RLREKE EVEKA R N ELE R AQ+ +EA
Sbjct: 155 QGEQLRRTLAEKRQRHYRALLGAAEESVARRLREKEAEVEKAARCNAELEARAAQLSMEA 214
Query: 615 QAWANKARNQETVAAS 662
Q W KAR QE AAS
Sbjct: 215 QVWQAKARAQEATAAS 230
Score = 45.8 bits (107), Expect(2) = 4e-26
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +1
Query: 289 SILSEDVHTQIKQQRDEIDHFLQLQGEHLRR 381
S+LSED QIK QRDEID FL+ QGE LRR
Sbjct: 131 SLLSEDFTAQIKHQRDEIDQFLRAQGEQLRR 161
Score = 73.9 bits (180), Expect = 8e-11
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 830 SGNGGEADDAESAHVDPERVLSSGPSCKACRKRVASVVLLP 952
SG GG+A+DAESA++DPERV SSGP CKACRKRVASVVLLP
Sbjct: 241 SGGGGQAEDAESAYIDPERVKSSGPMCKACRKRVASVVLLP 281
>ref|XP_002329543.1| predicted protein [Populus trichocarpa] gi|222870252|gb|EEF07383.1|
predicted protein [Populus trichocarpa]
Length = 345
Score = 99.4 bits (246), Expect(2) = 8e-26
Identities = 50/76 (65%), Positives = 56/76 (73%)
Frame = +3
Query: 435 QGEHLRRTLAERRQTHYRALLSVAEETAIKRLREKEDEVEKAIRRNNELEQRVAQMRIEA 614
QGE LRRTLAE+RQ HYRALL AEE+ +RLREKE E+EKA RRN ELE R Q+ I+A
Sbjct: 164 QGEQLRRTLAEKRQRHYRALLGAAEESIARRLREKEMEIEKATRRNAELEARATQLSIDA 223
Query: 615 QAWANKARNQETVAAS 662
Q W K R QE AAS
Sbjct: 224 QVWQAKVRTQEVTAAS 239
Score = 45.4 bits (106), Expect(2) = 8e-26
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +1
Query: 289 SILSEDVHTQIKQQRDEIDHFLQLQGEHLRR 381
S+ SED QIK+QRDEID FLQ QGE LRR
Sbjct: 140 SLSSEDFSIQIKRQRDEIDQFLQAQGEQLRR 170
Score = 63.9 bits (154), Expect = 8e-08
Identities = 32/52 (61%), Positives = 41/52 (78%), Gaps = 5/52 (9%)
Frame = +2
Query: 812 EEGVGCSGN---GGEADDAESAHVDPERV--LSSGPSCKACRKRVASVVLLP 952
++G+GC G +A+DAESA+VDP+RV + GPSCKACRKR+ASVVLLP
Sbjct: 261 DDGIGCPGGVEGQTQAEDAESAYVDPDRVTVVPGGPSCKACRKRMASVVLLP 312
>ref|XP_002326695.1| predicted protein [Populus trichocarpa] gi|222834017|gb|EEE72494.1|
predicted protein [Populus trichocarpa]
Length = 313
Score = 94.4 bits (233), Expect(2) = 8e-25
Identities = 47/76 (61%), Positives = 55/76 (72%)
Frame = +3
Query: 435 QGEHLRRTLAERRQTHYRALLSVAEETAIKRLREKEDEVEKAIRRNNELEQRVAQMRIEA 614
QGE LRR LAE+RQ HYRALL AEE+ +RLRE E EV++A R+N ELE R +Q+ IEA
Sbjct: 132 QGEQLRRALAEKRQQHYRALLGAAEESIARRLRESEAEVQRATRKNAELEARASQLSIEA 191
Query: 615 QAWANKARNQETVAAS 662
Q W KAR QE A S
Sbjct: 192 QVWQAKARTQEVTATS 207
Score = 47.0 bits (110), Expect(2) = 8e-25
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +1
Query: 295 LSEDVHTQIKQQRDEIDHFLQLQGEHLRR 381
+SED TQIK+QRDEID FLQ QGE LRR
Sbjct: 110 ISEDFSTQIKRQRDEIDQFLQAQGEQLRR 138
Score = 62.0 bits (149), Expect = 3e-07
Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 5/50 (10%)
Frame = +2
Query: 818 GVGCSGN---GGEADDAESAHVDPERV--LSSGPSCKACRKRVASVVLLP 952
G GCSG G+A+DAESA+VDP+RV + PSCK+CRKR+ASVVLLP
Sbjct: 231 GTGCSGGVEGQGQAEDAESAYVDPDRVTVVPGRPSCKSCRKRMASVVLLP 280