BLASTX nr result

ID: Coptis21_contig00012598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012598
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326609.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
ref|XP_002276342.1| PREDICTED: autophagy-related protein 3 [Viti...   583   e-164
ref|XP_002510982.1| conserved hypothetical protein [Ricinus comm...   577   e-162
ref|XP_002303487.1| predicted protein [Populus trichocarpa] gi|2...   568   e-160
gb|ACJ84826.1| unknown [Medicago truncatula] gi|388518803|gb|AFK...   568   e-160

>ref|XP_002326609.1| predicted protein [Populus trichocarpa] gi|222833931|gb|EEE72408.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  587 bits (1513), Expect = e-165
 Identities = 283/314 (90%), Positives = 303/314 (96%), Gaps = 1/314 (0%)
 Frame = -3

Query: 1234 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 1055
            MVL+QKIHEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLVSKCPTWSWESGEPS
Sbjct: 1    MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS 60

Query: 1054 KRKSYLPVEKQYLITRNVPCLRRVASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 875
            KRKSYLP EKQ+LITRNVPCLRR AS+EEEYEAAGGEVL+DNE+NDGWLATHGKPKETK 
Sbjct: 61   KRKSYLPAEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKG 120

Query: 874  DEEENLPSMETLEISKSKT-IQSMSSYFGGEEEEDIPDMLEYEEPDNLIETDEATVQSTY 698
            DE+EN+PSME LEIS  K+ IQ+  SYFGGEEEEDIPDM ++E+PDNLIE+D AT+Q+TY
Sbjct: 121  DEDENVPSMEALEISAKKSLIQTNHSYFGGEEEEDIPDMADFEDPDNLIESDPATLQTTY 180

Query: 697  LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK 518
            LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK
Sbjct: 181  LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK 240

Query: 517  TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTI 338
            TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKF+ASVIPTI
Sbjct: 241  TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTI 300

Query: 337  EYDYTMDFDLGSSS 296
            EYDYTMDFDLGSSS
Sbjct: 301  EYDYTMDFDLGSSS 314


>ref|XP_002276342.1| PREDICTED: autophagy-related protein 3 [Vitis vinifera]
            gi|297734579|emb|CBI16630.3| unnamed protein product
            [Vitis vinifera]
          Length = 314

 Score =  583 bits (1503), Expect = e-164
 Identities = 279/313 (89%), Positives = 297/313 (94%)
 Frame = -3

Query: 1234 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 1055
            MVL+QK+HEAFKGTVERITGPRTVSAFKEKGVLS+ EF+IAGDNLVSKCPTWSWESGEP 
Sbjct: 1    MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVTEFVIAGDNLVSKCPTWSWESGEPG 60

Query: 1054 KRKSYLPVEKQYLITRNVPCLRRVASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 875
            KRKSYLP EKQYLITRNVPCLRR AS+EEEYEAAGGEVL+DNE+NDGWLATHGKPKETK 
Sbjct: 61   KRKSYLPPEKQYLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKG 120

Query: 874  DEEENLPSMETLEISKSKTIQSMSSYFGGEEEEDIPDMLEYEEPDNLIETDEATVQSTYL 695
            D EENLPSMETL+ISK KTI+S+ +YFGGEEEEDIPDM +YEE DN++E D AT+Q  YL
Sbjct: 121  DAEENLPSMETLDISKDKTIKSIPTYFGGEEEEDIPDMADYEETDNVVEADAATLQMPYL 180

Query: 694  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 515
            VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE+RM LQPELVLEDVSQDHA KT
Sbjct: 181  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEARMPLQPELVLEDVSQDHAHKT 240

Query: 514  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTIE 335
            VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKF+ASVIPTIE
Sbjct: 241  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTIE 300

Query: 334  YDYTMDFDLGSSS 296
            YDYTMDFDLGSSS
Sbjct: 301  YDYTMDFDLGSSS 313


>ref|XP_002510982.1| conserved hypothetical protein [Ricinus communis]
            gi|223550097|gb|EEF51584.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 314

 Score =  577 bits (1487), Expect = e-162
 Identities = 275/314 (87%), Positives = 300/314 (95%)
 Frame = -3

Query: 1234 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 1055
            MVL+QK+HEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLV+KCPTWSWESGEPS
Sbjct: 1    MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWSWESGEPS 60

Query: 1054 KRKSYLPVEKQYLITRNVPCLRRVASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 875
            KR SYLP EKQ+LITRNVPCLRR AS+EEEYEAAGGEVL+DNE+NDGWLATHGKPKE+  
Sbjct: 61   KRMSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKESTG 120

Query: 874  DEEENLPSMETLEISKSKTIQSMSSYFGGEEEEDIPDMLEYEEPDNLIETDEATVQSTYL 695
            DE+EN+PS+E LEISK   I S+ SYFGG+EEEDIPDM +YE+P+NLIE+D AT+QSTYL
Sbjct: 121  DEDENVPSLEALEISKKSPIHSIPSYFGGKEEEDIPDMDDYEDPNNLIESDPATLQSTYL 180

Query: 694  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 515
            +AHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181  IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 514  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTIE 335
            VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEV KYLFLFLKF+ASVIPTIE
Sbjct: 241  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIE 300

Query: 334  YDYTMDFDLGSSSH 293
            YDYTMDFDLGSSS+
Sbjct: 301  YDYTMDFDLGSSSN 314


>ref|XP_002303487.1| predicted protein [Populus trichocarpa] gi|222840919|gb|EEE78466.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  568 bits (1465), Expect = e-160
 Identities = 278/315 (88%), Positives = 300/315 (95%), Gaps = 2/315 (0%)
 Frame = -3

Query: 1234 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 1055
            MVL+QKIHEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLVSKCPTWSWESGEPS
Sbjct: 1    MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS 60

Query: 1054 KRKSYLPVEKQYLITRNVPCLRRVASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 875
            KRK YLP EKQ+LITRNVPCLRR AS+EE+YEAAGGEVL+DNE+NDGWLATHGKPKETK 
Sbjct: 61   KRKPYLPAEKQFLITRNVPCLRRAASVEEDYEAAGGEVLLDNEDNDGWLATHGKPKETKG 120

Query: 874  DEEENLPSMETLEIS-KSKTIQSMSSYFGGEEEEDIPDMLEYEEPDNLIETDEATVQSTY 698
            DE+EN+PSME L+IS K   IQ+  SYFGG EEEDIPDM ++E+PDNLIE+D AT+Q+TY
Sbjct: 121  DEDENVPSMEALDISVKRIPIQTNPSYFGG-EEEDIPDMADFEDPDNLIESDPATLQTTY 179

Query: 697  LVAHEP-DDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 521
            LVAHEP DDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLL+PELVLEDVSQDHAR
Sbjct: 180  LVAHEPDDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLEPELVLEDVSQDHAR 239

Query: 520  KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPT 341
            KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKF+ASVIPT
Sbjct: 240  KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 299

Query: 340  IEYDYTMDFDLGSSS 296
            IEYDYTMDFDLGSSS
Sbjct: 300  IEYDYTMDFDLGSSS 314


>gb|ACJ84826.1| unknown [Medicago truncatula] gi|388518803|gb|AFK47463.1| unknown
            [Medicago truncatula]
          Length = 310

 Score =  568 bits (1465), Expect = e-160
 Identities = 275/314 (87%), Positives = 298/314 (94%)
 Frame = -3

Query: 1234 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 1055
            MVL+QK+HEAFKGTVERITG RTVSAFKEKGVLS++EFIIAGDNLV+KCPTWSWESGEPS
Sbjct: 1    MVLSQKLHEAFKGTVERITGHRTVSAFKEKGVLSVSEFIIAGDNLVAKCPTWSWESGEPS 60

Query: 1054 KRKSYLPVEKQYLITRNVPCLRRVASIEEEYEAAGGEVLIDNEENDGWLATHGKPKETKC 875
            KRKSYLP EKQ+LITRNVPCLRR ASIEEEYEAAGGEVL+D+EENDGWLATHGKPKETK 
Sbjct: 61   KRKSYLPSEKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDDEENDGWLATHGKPKETKS 120

Query: 874  DEEENLPSMETLEISKSKTIQSMSSYFGGEEEEDIPDMLEYEEPDNLIETDEATVQSTYL 695
            DEEENLPSME+LEIS+  +++  SS+ GGE++EDIPDM E++E DN+IETD     STYL
Sbjct: 121  DEEENLPSMESLEISEKSSVKQTSSHTGGEDDEDIPDMEEFKEYDNIIETD----PSTYL 176

Query: 694  VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 515
            VAHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 177  VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 236

Query: 514  VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMARGVEPEVDKYLFLFLKFMASVIPTIE 335
            VTIEDHPHLPGKHAS+HPCRHGAVMKKIIDVLM+RGVEPEVDKYLFLFLKFMASVIPTIE
Sbjct: 237  VTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIE 296

Query: 334  YDYTMDFDLGSSSH 293
            YDYTMDFDLGSSS+
Sbjct: 297  YDYTMDFDLGSSSN 310


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