BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012572
         (1821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplas...   738   0.0  
emb|CBI21621.3| unnamed protein product [Vitis vinifera]              736   0.0  
ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|2...   718   0.0  
ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus commun...   712   0.0  
ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplas...   696   0.0  

>ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 543

 Score =  738 bits (1906), Expect = 0.0
 Identities = 387/544 (71%), Positives = 447/544 (82%), Gaps = 11/544 (2%)
 Frame = +1

Query: 55   SLAAWATVTPFRR--------GKQFPIFLRKNATSNLPMLGKFSRRRTFYSVVSSSTAKS 210
            +L+A  T+T F R        G  FP   RK A  N+ +L  F + + F  V S +T  +
Sbjct: 5    ALSASPTLTLFNRVSGRSKQWGMLFPGSSRKLAI-NMSILMNF-QSKGFSFVASGATQWN 62

Query: 211  GD--DVVDGETPTPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLV 384
            G   ++V+GE  +    Y W DK++PRVCILGGGFGGLYTALRLESLVW +DKKPQVLLV
Sbjct: 63   GGVAELVEGEAASRP--YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLV 120

Query: 385  DQSDRFVFKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKNGST 564
            DQS+RFVFKP+LYELL+GEVDAWEIAPRF DLLANT VQF QDRVK+L PSDHLG NG T
Sbjct: 121  DQSERFVFKPMLYELLTGEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPT 180

Query: 565  RLSCGGRVQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDAFKVNTKLRTL 744
              SCGG V LESGL IEYDWLVLALGAE KLD+VPGAAEFALPFSTLEDA +V+ +LRTL
Sbjct: 181  VSSCGGTVHLESGLVIEYDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTL 240

Query: 745  EREKFGKDLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREA 924
            ER++FG+D  PIRVAVVGCGYSGVELAATVSERLQ +G VQAINV TTI P APPGNREA
Sbjct: 241  ERKRFGRDF-PIRVAVVGCGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREA 299

Query: 925  AAKVLSSRNVQLFLGYFVSCIRKSGKYEDSKLSVFERNN-DIVSEQAHAELVLELQPAER 1101
            A KVLSSRNV+L LG+FV CIRK+   E S+         D  +E    +L+LELQPAER
Sbjct: 300  ALKVLSSRNVELLLGFFVRCIRKASISEVSEKQTESGTLLDAAAEHEPEKLILELQPAER 359

Query: 1102 GLKSQILESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIG 1281
            GL+SQILE+DL+LWTVGSKP +P++E  + PH LP+N RGQAETDETLRVKGHPR+FA+G
Sbjct: 360  GLQSQILEADLILWTVGSKPQLPQLEPCEWPHELPLNARGQAETDETLRVKGHPRIFAVG 419

Query: 1282 DSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA 1461
            DS++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA
Sbjct: 420  DSSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA 479

Query: 1462 ITPSFIEGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLSKSAVDSIASFQSNVTKV 1641
            I+PSFIEGLTL+GPIGH ARK+AYLIRLPTDEH++KVG+SWL+KSA+DS+A+ QS+V KV
Sbjct: 480  ISPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQSSVIKV 539

Query: 1642 LSGS 1653
            LSGS
Sbjct: 540  LSGS 543


>emb|CBI21621.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  736 bits (1900), Expect = 0.0
 Identities = 385/543 (70%), Positives = 444/543 (81%), Gaps = 10/543 (1%)
 Frame = +1

Query: 55   SLAAWATVTPFRR--------GKQFPIFLRKNATSNLPMLGKFSRRRTFYSVVSSSTAKS 210
            +L+A  T+T F R        G  FP   RK A  N+ +L  F + + F  V S +T  +
Sbjct: 5    ALSASPTLTLFNRVSGRSKQWGMLFPGSSRKLAI-NMSILMNF-QSKGFSFVASGATQWN 62

Query: 211  GD--DVVDGETPTPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLV 384
            G   ++V+GE  +    Y W DK++PRVCILGGGFGGLYTALRLESLVW +DKKPQVLLV
Sbjct: 63   GGVAELVEGEAASRP--YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLV 120

Query: 385  DQSDRFVFKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKNGST 564
            DQS+RFVFKP+LYELL+GEVDAWEIAPRF DLLANT VQF QDRVK+L PSDHLG NG T
Sbjct: 121  DQSERFVFKPMLYELLTGEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPT 180

Query: 565  RLSCGGRVQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDAFKVNTKLRTL 744
              SCGG V LESGL IEYDWLVLALGAE KLD+VPGAAEFALPFSTLEDA +V+ +LRTL
Sbjct: 181  VSSCGGTVHLESGLVIEYDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTL 240

Query: 745  EREKFGKDLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREA 924
            ER++FG+D  PIRVAVVGCGYSGVELAATVSERLQ +G VQAINV TTI P APPGNREA
Sbjct: 241  ERKRFGRDF-PIRVAVVGCGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREA 299

Query: 925  AAKVLSSRNVQLFLGYFVSCIRKSGKYEDSKLSVFERNNDIVSEQAHAELVLELQPAERG 1104
            A KVLSSRNV+L LG+FV CIRK+                 +SE    +L+LELQPAERG
Sbjct: 300  ALKVLSSRNVELLLGFFVRCIRKAS----------------ISEHEPEKLILELQPAERG 343

Query: 1105 LKSQILESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGD 1284
            L+SQILE+DL+LWTVGSKP +P++E  + PH LP+N RGQAETDETLRVKGHPR+FA+GD
Sbjct: 344  LQSQILEADLILWTVGSKPQLPQLEPCEWPHELPLNARGQAETDETLRVKGHPRIFAVGD 403

Query: 1285 SAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAI 1464
            S++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAI
Sbjct: 404  SSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAI 463

Query: 1465 TPSFIEGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLSKSAVDSIASFQSNVTKVL 1644
            +PSFIEGLTL+GPIGH ARK+AYLIRLPTDEH++KVG+SWL+KSA+DS+A+ QS+V KVL
Sbjct: 464  SPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQSSVIKVL 523

Query: 1645 SGS 1653
            SGS
Sbjct: 524  SGS 526


>ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|222852852|gb|EEE90399.1|
            predicted protein [Populus trichocarpa]
          Length = 553

 Score =  718 bits (1854), Expect = 0.0
 Identities = 365/488 (74%), Positives = 410/488 (84%)
 Frame = +1

Query: 190  SSSTAKSGDDVVDGETPTPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKP 369
            ++S +   +D+   ETP  +  Y W D ++P+VCILGGGFGGLYTALRLESL+W DDKKP
Sbjct: 84   AASPSPVNEDISQKETPQRI--YTWPDNKKPKVCILGGGFGGLYTALRLESLIWADDKKP 141

Query: 370  QVLLVDQSDRFVFKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLG 549
            QVLLVDQS+RFVFKPLLYELLSGEVDAWEIAPRF +LLANT +QF++DRVK+L P+DHLG
Sbjct: 142  QVLLVDQSERFVFKPLLYELLSGEVDAWEIAPRFSELLANTGIQFLRDRVKMLHPADHLG 201

Query: 550  KNGSTRLSCGGRVQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDAFKVNT 729
             NGST    GG V LESGL IEYDWLVL+LGA  KLD VPGAAEFA PFSTLEDA KV+ 
Sbjct: 202  MNGSTGSCSGGTVVLESGLLIEYDWLVLSLGAGAKLDTVPGAAEFAFPFSTLEDACKVDN 261

Query: 730  KLRTLEREKFGKDLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPP 909
            KL+ LER KFGKD S IRVAVVGCGYSGVELAATVSERLQ RG VQAINV+TTILP APP
Sbjct: 262  KLKELERRKFGKD-SLIRVAVVGCGYSGVELAATVSERLQDRGLVQAINVNTTILPTAPP 320

Query: 910  GNREAAAKVLSSRNVQLFLGYFVSCIRKSGKYEDSKLSVFERNNDIVSEQAHAELVLELQ 1089
            GNREAA KVLSSR VQL LGYFV CIRK    E               E    + +LELQ
Sbjct: 321  GNREAALKVLSSRKVQLLLGYFVRCIRKESDLE---------------EHGSEKYILELQ 365

Query: 1090 PAERGLKSQILESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVKGHPRV 1269
            PAERGL+SQILE+DLVLWTVGS+P +P++E  D+ H LP+NGRGQAETDETLRVKGHPR+
Sbjct: 366  PAERGLQSQILEADLVLWTVGSQPPLPQLEPYDKTHELPLNGRGQAETDETLRVKGHPRI 425

Query: 1270 FAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGR 1449
            FA+GDS+ALRD  GRILPATAQVAFQQADF GWNLWAAINDRPLLPFRFQNLGEMMTLGR
Sbjct: 426  FALGDSSALRDMNGRILPATAQVAFQQADFTGWNLWAAINDRPLLPFRFQNLGEMMTLGR 485

Query: 1450 NDAAITPSFIEGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLSKSAVDSIASFQSN 1629
            NDAA++PSFIEGLTL+GP+GH ARKIAYLIRLPTDEH++KVG+SWL+KSAVDS+AS QS 
Sbjct: 486  NDAALSPSFIEGLTLEGPVGHAARKIAYLIRLPTDEHRLKVGISWLTKSAVDSVASIQST 545

Query: 1630 VTKVLSGS 1653
            ++KVLSGS
Sbjct: 546  LSKVLSGS 553


>ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus communis]
            gi|223532582|gb|EEF34369.1| NADH dehydrogenase, putative
            [Ricinus communis]
          Length = 536

 Score =  712 bits (1838), Expect = 0.0
 Identities = 371/539 (68%), Positives = 429/539 (79%), Gaps = 7/539 (1%)
 Frame = +1

Query: 55   SLAAWATVTPFRR-----GKQFPIFLRKNATSNLPMLGKFSRRRTFYSVVSSSTAKSGDD 219
            +L+  AT+ P  R      K FP   + +    L     FS R   + +V  S       
Sbjct: 5    ALSCTATLVPVNRIANRVHKLFPTAPKSSIRCQL-----FSNRG--FRLVGCSAIGGNQG 57

Query: 220  VVD-GETPTPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSD 396
            V +  ++ T   +Y W D ++PRVCILGGGFGGLYTALRLESLVW DDKKPQVLLVDQS 
Sbjct: 58   VAEISQSETRPRIYTWPDNKKPRVCILGGGFGGLYTALRLESLVWADDKKPQVLLVDQSA 117

Query: 397  RFVFKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKNGSTRLSC 576
             FVFKP+LYELLSGEVDAWEIAPRF DLLANT V F+QD+VK+LQPSDHLGKNGS+  SC
Sbjct: 118  HFVFKPMLYELLSGEVDAWEIAPRFSDLLANTGVLFLQDKVKLLQPSDHLGKNGSSGSSC 177

Query: 577  GGRVQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDAFKVNTKLRTLEREK 756
            GG V L SGL IEYDWLVLALGAE +LD+VPGAA+ A PFSTLEDA +VN KL  LER  
Sbjct: 178  GGTVLLASGLLIEYDWLVLALGAEARLDVVPGAAKCAFPFSTLEDACRVNHKLNALERRN 237

Query: 757  FGKDLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKV 936
            FGKD S IRVAVVGCGYSGVELAAT+SERL+ RG +QAIN+ T I P APPGNREAA +V
Sbjct: 238  FGKD-SLIRVAVVGCGYSGVELAATISERLKERGVIQAINIDTNICPAAPPGNREAALRV 296

Query: 937  LSSRNVQLFLGYFVSCIRKSGKYEDSKLSV-FERNNDIVSEQAHAELVLELQPAERGLKS 1113
            LSSR VQL LGYFV CI+ +   E S +S   + + +I SE +  +  LELQPAERGL+S
Sbjct: 297  LSSRKVQLLLGYFVRCIQIANDLETSAMSAEVDASENIASEHSSEKYFLELQPAERGLQS 356

Query: 1114 QILESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAA 1293
            QILE+DLVLWTVGSKPL+ ++ES  +   LP+N RGQAETDETLRVKGHPR+FA+GDS+A
Sbjct: 357  QILEADLVLWTVGSKPLLSQLESDYQSRELPLNARGQAETDETLRVKGHPRIFALGDSSA 416

Query: 1294 LRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPS 1473
            LRDS+GR+LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA++PS
Sbjct: 417  LRDSSGRLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAALSPS 476

Query: 1474 FIEGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLSKSAVDSIASFQSNVTKVLSG 1650
            FIEGLTL+GPIGH ARK+AYLIRLPTDEH++KVG+SWL+KSA+DS+AS QS + KVLSG
Sbjct: 477  FIEGLTLEGPIGHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVASMQSTLAKVLSG 535


>ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 544

 Score =  696 bits (1796), Expect = 0.0
 Identities = 361/538 (67%), Positives = 420/538 (78%), Gaps = 11/538 (2%)
 Frame = +1

Query: 73   TVTPFRRGKQ-----FPIFLRKNATSNLPMLGKFSRRRTFYSVVSSSTAKSG---DDVVD 228
            TV  F RG +      P F R     +        +R       S     +G   +++ +
Sbjct: 13   TVVAFHRGAKQWSALIPNFRRSRGIGSSVFSSSLRKRLQLRFFASGENGGNGGVLEEISE 72

Query: 229  GET-PTPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFV 405
             E  PT    +AW D ++PRVCILGGGFGGLYTALRLESL W DDKKPQ++LVDQS+RFV
Sbjct: 73   AEKEPTN---FAWPDNKKPRVCILGGGFGGLYTALRLESLEWPDDKKPQIVLVDQSERFV 129

Query: 406  FKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKNGSTRLSCGGR 585
            FKP+LYELLSGEVD WEIAPRF DLLANT+VQF +DRVK+L PSDH G NGS   SCGG 
Sbjct: 130  FKPMLYELLSGEVDEWEIAPRFSDLLANTSVQFFKDRVKVLNPSDHWGMNGSKASSCGGT 189

Query: 586  VQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDAFKVNTKLRTLEREKFGK 765
            V LESGL IEYDWLVLALGAE KLD+VPGA EFA+PFSTLEDA KVN KL  LER+ FG 
Sbjct: 190  VHLESGLLIEYDWLVLALGAEAKLDVVPGAIEFAIPFSTLEDARKVNDKLTKLERKTFGT 249

Query: 766  DLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSS 945
            D   I VAVVGCGYSGVELAAT++ERLQ+RG V+AINV T I P APPGNRE A KVLSS
Sbjct: 250  DFQ-ISVAVVGCGYSGVELAATLAERLQNRGIVRAINVETMICPNAPPGNREVALKVLSS 308

Query: 946  RNVQLFLGYFVSCIRKSGKYEDSK--LSVFERNNDIVSEQAHAELVLELQPAERGLKSQI 1119
            R V+L LGYFV CIR+    E S     V E + ++V +    + +LELQPAERG++S+I
Sbjct: 309  RKVELLLGYFVRCIRRLSDLESSDPLTGVDENSTEVVPD--FEKYILELQPAERGMQSKI 366

Query: 1120 LESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALR 1299
            +E+DLVLWTVG+KP +P++E  D P ++P+N RGQAETDETLRVKGHPR+FA+GDS+ALR
Sbjct: 367  IEADLVLWTVGTKPPLPQLEPSDEPFVIPLNARGQAETDETLRVKGHPRIFALGDSSALR 426

Query: 1300 DSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFI 1479
            DS GRILPATAQVAFQQADF GWNLWAAIN RPLLPFRFQNLGEMMTLGRNDAAI+PSFI
Sbjct: 427  DSNGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFI 486

Query: 1480 EGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLSKSAVDSIASFQSNVTKVLSGS 1653
            +GLTL+G IGHTARKIAYLIRLPTDEH++KVG+SWL+KSA+DS++S QS + KVLSGS
Sbjct: 487  DGLTLEGSIGHTARKIAYLIRLPTDEHRLKVGISWLTKSAIDSVSSLQSTLYKVLSGS 544