BLASTX nr result

ID: Coptis21_contig00012559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012559
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28516.3| unnamed protein product [Vitis vinifera]              314   2e-83
ref|XP_002263114.1| PREDICTED: AP-1 complex subunit sigma-2-like...   314   2e-83
emb|CBI22701.3| unnamed protein product [Vitis vinifera]              312   6e-83
ref|XP_002269251.1| PREDICTED: AP-1 complex subunit sigma-1 [Vit...   312   6e-83
ref|XP_002514388.1| clathrin coat assembly protein ap19, putativ...   310   2e-82

>emb|CBI28516.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score =  314 bits (804), Expect = 2e-83
 Identities = 155/161 (96%), Positives = 159/161 (98%)
 Frame = +2

Query: 50  MIHFVLLISRQGKVRLTKWYSPYSQKERIKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 229
           MIHFVLLISRQGKVRLTKWYSPYSQKER KVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 18  MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 77

Query: 230 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 409
           RYASLYFCMCIDQ+DNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYY+LDE+LIA
Sbjct: 78  RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYVLDELLIA 137

Query: 410 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 532
           GELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 138 GELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 178


>ref|XP_002263114.1| PREDICTED: AP-1 complex subunit sigma-2-like [Vitis vinifera]
          Length = 161

 Score =  314 bits (804), Expect = 2e-83
 Identities = 155/161 (96%), Positives = 159/161 (98%)
 Frame = +2

Query: 50  MIHFVLLISRQGKVRLTKWYSPYSQKERIKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 229
           MIHFVLLISRQGKVRLTKWYSPYSQKER KVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60

Query: 230 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 409
           RYASLYFCMCIDQ+DNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYY+LDE+LIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYVLDELLIA 120

Query: 410 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 532
           GELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 161


>emb|CBI22701.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  312 bits (799), Expect = 6e-83
 Identities = 154/161 (95%), Positives = 159/161 (98%)
 Frame = +2

Query: 50  MIHFVLLISRQGKVRLTKWYSPYSQKERIKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 229
           MIHFVLLISRQGKVRLTKWYSPY+QKER KVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 30  MIHFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 89

Query: 230 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 409
           RYASLYFCMCIDQ+DNELEVLEIIHH+VEILDRYFGSVCELDLIFNFHKAYYILDE+LIA
Sbjct: 90  RYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 149

Query: 410 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 532
           GELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 150 GELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 190


>ref|XP_002269251.1| PREDICTED: AP-1 complex subunit sigma-1 [Vitis vinifera]
           gi|147853756|emb|CAN79566.1| hypothetical protein
           VITISV_017884 [Vitis vinifera]
          Length = 161

 Score =  312 bits (799), Expect = 6e-83
 Identities = 154/161 (95%), Positives = 159/161 (98%)
 Frame = +2

Query: 50  MIHFVLLISRQGKVRLTKWYSPYSQKERIKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 229
           MIHFVLLISRQGKVRLTKWYSPY+QKER KVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 1   MIHFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60

Query: 230 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 409
           RYASLYFCMCIDQ+DNELEVLEIIHH+VEILDRYFGSVCELDLIFNFHKAYYILDE+LIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 410 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 532
           GELQE+SKKTVARLIAAQDSLVETAKEEA SISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 161


>ref|XP_002514388.1| clathrin coat assembly protein ap19, putative [Ricinus communis]
           gi|223546485|gb|EEF47984.1| clathrin coat assembly
           protein ap19, putative [Ricinus communis]
          Length = 161

 Score =  310 bits (794), Expect = 2e-82
 Identities = 154/161 (95%), Positives = 158/161 (98%)
 Frame = +2

Query: 50  MIHFVLLISRQGKVRLTKWYSPYSQKERIKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 229
           MI FVLLISRQGKVRLTKWYSPYSQKER KVIRELSGVILTRGPKLCNFVEWRGYKVVYK
Sbjct: 1   MIQFVLLISRQGKVRLTKWYSPYSQKERTKVIRELSGVILTRGPKLCNFVEWRGYKVVYK 60

Query: 230 RYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA 409
           RYASLYFCMCIDQ+DNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDE+LIA
Sbjct: 61  RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120

Query: 410 GELQETSKKTVARLIAAQDSLVETAKEEAGSISNIIAQATK 532
           GELQE+SKKTVARLIAAQDSLVETAKE+A SISNIIAQATK
Sbjct: 121 GELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161


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