BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012553
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   399   e-109
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   399   e-108
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   386   e-105
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              362   1e-97
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   354   3e-95

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/415 (47%), Positives = 282/415 (67%), Gaps = 2/415 (0%)
 Frame = -3

Query: 1465 KKHKHAFQVMDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFEYLPEHARNKLTYGA 1286
            KK+KHA Q+ +W  +  NDL+  D AI +DLL+K EG+  AE YF  L E A+   TYGA
Sbjct: 75   KKYKHAAQIYEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGA 134

Query: 1285 LLHCYCKENMLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKG 1106
            LL+CYCKENM++KA+ L +K++ELN+ S+ L YNN++S+ + +G+P  VP L+ EM+ K 
Sbjct: 135  LLNCYCKENMVDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKD 194

Query: 1105 ILPDIHTYTCLLDSYALLKDTKNAERVVSEMKEAGVKCDWTTYTSLASIYVKEGLIDKAN 926
            I  D++TY  L++SYA +KD +  E+V+ +MK+ GV+ DW TY +LA+IYV  G   KAN
Sbjct: 195  IPADLYTYNLLMNSYASVKDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAGHTKKAN 254

Query: 925  SALKEVENMDKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQAL 746
             AL+++E      D +A+ +L+ LY+  SN  GV R WESLKL  P+  N +Y  ML AL
Sbjct: 255  YALQKLEQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLAL 314

Query: 745  SRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNV 566
            S+LGD  GLEK F+EWES  + YD+RL+N++++SYL R+MIEEA  L E   K+G E  +
Sbjct: 315  SKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKL 374

Query: 565  GTLMKFMRFYLRKHQMKLACKYFEEATLKV--KVNHWNASRETVSSFLNYFEEEKDADGA 392
             TL  FM+FYL+KHQ+ LA KY +    K   + N W  + ET++ FL YFEE KD D A
Sbjct: 375  KTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSA 434

Query: 391  EYFCKLLKNINSLPADVYSSLSRTYVAAGMMESQIHDRLKANGIEIGA*IKKFLE 227
            E FC+ ++ I+ L + +Y SL RTY+AAG  E  + +R+K +GIEI +  +K L+
Sbjct: 435  EKFCETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLLQ 489


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial [Vitis vinifera]
            gi|296089781|emb|CBI39600.3| unnamed protein product
            [Vitis vinifera]
          Length = 498

 Score =  399 bits (1025), Expect = e-108
 Identities = 199/415 (47%), Positives = 282/415 (67%), Gaps = 2/415 (0%)
 Frame = -3

Query: 1465 KKHKHAFQVMDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFEYLPEHARNKLTYGA 1286
            KK+KHA Q+ +W  +  NDL+  D AI +DLL+K EG+  AE YF  L E A+   TYGA
Sbjct: 79   KKYKHAAQIYEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGA 138

Query: 1285 LLHCYCKENMLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKG 1106
            LL+CYCKENML+KA+ L +K++ELN+ S+ L YNN++S+ + +G+P  VP L+ EM+ K 
Sbjct: 139  LLNCYCKENMLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKD 198

Query: 1105 ILPDIHTYTCLLDSYALLKDTKNAERVVSEMKEAGVKCDWTTYTSLASIYVKEGLIDKAN 926
            I  D++TY  L++SYA +KD +  E+V+ +MK+ GV+ DW TY +LA+IYV  G   KAN
Sbjct: 199  IPADLYTYNLLMNSYASVKDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAGHTKKAN 258

Query: 925  SALKEVENMDKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQAL 746
             AL+++E      D +A+ +L+ LY+  SN  GV R WESLKL  P+  N +Y  ML AL
Sbjct: 259  YALQKLEQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLAL 318

Query: 745  SRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNV 566
            S+LGD  GLEK F+EWES  + YD+RL+N++++SYL R++IEEA  L E   K+G E  +
Sbjct: 319  SKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELKL 378

Query: 565  GTLMKFMRFYLRKHQMKLACKYFEEATLKV--KVNHWNASRETVSSFLNYFEEEKDADGA 392
             TL  FM+FYL+KHQ+ LA KY +    K   + N W  + ET++ FL YFEE KD D A
Sbjct: 379  KTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSA 438

Query: 391  EYFCKLLKNINSLPADVYSSLSRTYVAAGMMESQIHDRLKANGIEIGA*IKKFLE 227
            E FC+ ++ I+ L + +Y SL RTY+AAG  E  + +R+K +GIEI +  +K L+
Sbjct: 439  EKFCETMRKISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLLQ 493


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  386 bits (992), Expect = e-105
 Identities = 199/405 (49%), Positives = 269/405 (66%), Gaps = 1/405 (0%)
 Frame = -3

Query: 1465 KKHKHAFQVMDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFEYLPEHARNKLTYGA 1286
            ++ +HA ++MDW   R    S  D+A+ LDLLSK +G+ TAE+YF  L   A+N LTYG 
Sbjct: 90   RQFQHALEIMDWMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGT 149

Query: 1285 LLHCYCKENMLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKG 1106
            LL+CYCKE M EKA+ L EKM ELN+AST L +NNLMS+ + +GKP  VPPL+ EMK + 
Sbjct: 150  LLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRS 209

Query: 1105 ILPDIHTYTCLLDSYALLKDTKNAERVVSEMK-EAGVKCDWTTYTSLASIYVKEGLIDKA 929
            I PD  TY  L+ SYA L D + AERV+ E+K E   K  WTTY++LA++YV   L +KA
Sbjct: 210  ISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKA 269

Query: 928  NSALKEVENMDKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQA 749
              ALK++E    F DR AYH L++LY+ I+N   V RVW SLK  FP+T N++Y  MLQA
Sbjct: 270  ELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQA 329

Query: 748  LSRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPN 569
            L+ L D DGL+  FEEW+SS   +D+RL N+ + ++L  DMI++AE +   AVK+ + P 
Sbjct: 330  LANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPF 389

Query: 568  VGTLMKFMRFYLRKHQMKLACKYFEEATLKVKVNHWNASRETVSSFLNYFEEEKDADGAE 389
               L  FM  +L+  ++  A KY E A  +VK N W  + E V +FL YFEEEKD +GAE
Sbjct: 390  YTALDMFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAE 449

Query: 388  YFCKLLKNINSLPADVYSSLSRTYVAAGMMESQIHDRLKANGIEI 254
             FCK+LKNI+ L ++ Y  L +T VAAG  E ++  R+K + IE+
Sbjct: 450  KFCKILKNISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEV 494


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  362 bits (930), Expect = 1e-97
 Identities = 186/370 (50%), Positives = 248/370 (67%), Gaps = 1/370 (0%)
 Frame = -3

Query: 1465 KKHKHAFQVMDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFEYLPEHARNKLTYGA 1286
            ++ +HA ++MDW   R    S  D+A+ LDLLSK +G+ TAE+YF  L   A+N LTYG 
Sbjct: 129  RQFQHALEIMDWMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGT 188

Query: 1285 LLHCYCKENMLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKG 1106
            LL+CYCKE M EKA+ L EKM ELN+AST L +NNLMS+ + +GKP  VPPL+ EMK + 
Sbjct: 189  LLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRS 248

Query: 1105 ILPDIHTYTCLLDSYALLKDTKNAERVVSEMK-EAGVKCDWTTYTSLASIYVKEGLIDKA 929
            I PD  TY  L+ SYA L D + AERV+ E+K E   K  WTTY++LA++YV   L +KA
Sbjct: 249  ISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKA 308

Query: 928  NSALKEVENMDKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQA 749
              ALK++E    F DR AYH L++LY+ I+N   V RVW SLK  FP+T N++Y  MLQA
Sbjct: 309  ELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQA 368

Query: 748  LSRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPN 569
            L+ L D DGL+  FEEW+SS   +D+RL N+ + ++L  DMI++AE +   AVK+ + P 
Sbjct: 369  LANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPF 428

Query: 568  VGTLMKFMRFYLRKHQMKLACKYFEEATLKVKVNHWNASRETVSSFLNYFEEEKDADGAE 389
               L  FM  +L+  ++  A KY E A  +VK N W  + E V +FL YFEEEKD +GAE
Sbjct: 429  YTALDMFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAE 488

Query: 388  YFCKLLKNIN 359
             FCK+LKNI+
Sbjct: 489  KFCKILKNIS 498


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Glycine max]
          Length = 490

 Score =  354 bits (909), Expect = 3e-95
 Identities = 190/419 (45%), Positives = 261/419 (62%), Gaps = 4/419 (0%)
 Frame = -3

Query: 1465 KKHKHAFQVMDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFEYLPEHARNKLTYGA 1286
            K ++ A ++ +   +R    +  DHAIHLDLL+K  G+  AE YF  LPE ++N L YGA
Sbjct: 69   KLYQPALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCYGA 128

Query: 1285 LLHCYCKENMLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKG 1106
            LL+CYCKE M EK+  L+EKM+EL+   + + YN+LM++   +G+P  +P LI EMK   
Sbjct: 129  LLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASN 188

Query: 1105 ILPDIHTYTCLLDSYALLKDTKNAERVVSEMKEAG-VKCDWTTYTSLASIYVKEGLIDKA 929
            ++ D +TY   + + A + D    ERV  EMK  G V  DWTTY++LASI+V  GL DKA
Sbjct: 189  VMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKA 248

Query: 928  NSALKEVENMDKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQA 749
              ALKE+E  + F+D  AY  L+TLY    N   VYRVW SL+L FP+TANI+Y  M+Q 
Sbjct: 249  EVALKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQV 308

Query: 748  LSRLGDTDGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPN 569
            L  L D  G EK F EWE     YDIR+ N+LI +Y++ DM+E+AE+L+E A ++GA+PN
Sbjct: 309  LVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPN 368

Query: 568  VGTLMKFMRFYLRKHQMKLACKYFEEATLKVKVN--HWNASRETVSSFLNYFEEEKDADG 395
              TL  FM +YL K   KLA  Y  EA    + N   W  S   +S  + +FE+EKD DG
Sbjct: 369  AKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDVDG 428

Query: 394  AEYFCKLL-KNINSLPADVYSSLSRTYVAAGMMESQIHDRLKANGIEIGA*IKKFLETL 221
            AE F ++L K++ S   +V+ SL RTY AAG + S +  RLK   +E+    +K LE +
Sbjct: 429  AEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGTQKLLEAI 487