BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012552
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...    59   4e-07
gb|AFW80629.1| hypothetical protein ZEAMMB73_384852 [Zea mays]         59   5e-07
gb|ACN31600.1| unknown [Zea mays]                                      59   5e-07

>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/67 (40%), Positives = 46/67 (68%)
 Frame = -1

Query: 304 FEEEKDADGADYLCKLLKNINCLPGDVYSSLYRTYVAAGLTESQIHDRIKANGIKMSA*I 125
           FE+EKD +GA+ LCK+LK+IN L  + Y  L +TY+AAG    ++  R++ +GI+++  +
Sbjct: 405 FEDEKDVNGAERLCKILKHINRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPEL 464

Query: 124 QKFIGRV 104
           +  + RV
Sbjct: 465 ENLLERV 471


>ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 545

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/67 (43%), Positives = 42/67 (62%)
 Frame = -1

Query: 304 FEEEKDADGADYLCKLLKNINCLPGDVYSSLYRTYVAAGLTESQIHDRIKANGIKMSA*I 125
           FEE+KD  GA+ LC  L+ + C+ G VY SL RTY+AAG T   +  +IK + I++   I
Sbjct: 474 FEEQKDVQGAEKLCSCLRTLGCIDGKVYESLLRTYLAAGETNHSLRQQIKDDKIEICYDI 533

Query: 124 QKFIGRV 104
            K + R+
Sbjct: 534 GKLLKRM 540


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = -1

Query: 304 FEEEKDADGADYLCKLLKNINCLPGDVYSSLYRTYVAAGLTESQIHDRIKANGIKMS 134
           F  EKD DGA+ L K+LK+INCL   VYS L +TY+AAG    ++  R++ + I++S
Sbjct: 435 FRTEKDVDGAEKLSKILKHINCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEIS 491


>gb|AFW80629.1| hypothetical protein ZEAMMB73_384852 [Zea mays]
          Length = 184

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/67 (40%), Positives = 40/67 (59%)
 Frame = -1

Query: 304 FEEEKDADGADYLCKLLKNINCLPGDVYSSLYRTYVAAGLTESQIHDRIKANGIKMSA*I 125
           FEE KDADGA+  C  L+ + C+ G  Y SL RTY+AAG     +  +IK + +++   I
Sbjct: 113 FEEHKDADGAERFCNCLRTLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKVEICYDI 172

Query: 124 QKFIGRV 104
            K + R+
Sbjct: 173 GKLLKRL 179


>gb|ACN31600.1| unknown [Zea mays]
          Length = 515

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/67 (40%), Positives = 40/67 (59%)
 Frame = -1

Query: 304 FEEEKDADGADYLCKLLKNINCLPGDVYSSLYRTYVAAGLTESQIHDRIKANGIKMSA*I 125
           FEE KDADGA+  C  L+ + C+ G  Y SL RTY+AAG     +  +IK + +++   I
Sbjct: 444 FEEHKDADGAERFCNCLRTLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKVEICYDI 503

Query: 124 QKFIGRV 104
            K + R+
Sbjct: 504 GKLLKRL 510