BLASTX nr result

ID: Coptis21_contig00012543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012543
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinife...   147   2e-33
ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|2...   145   6e-33
ref|XP_002523565.1| conserved hypothetical protein [Ricinus comm...   123   3e-26
ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259...   120   3e-25
gb|AFK37699.1| unknown [Lotus japonicus]                              114   2e-23

>emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinifera]
           gi|296082431|emb|CBI21436.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score =  147 bits (372), Expect = 2e-33
 Identities = 81/165 (49%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
 Frame = -3

Query: 636 MACIDMFKTDHQGLCTPMSPRISFSNDFIDTQQTIKHEHNSSIEVPVASEHFEFSVNRYT 457
           MAC+DM+ ++H+GLC PMSPRISFSNDF+++QQ IKHE  SS E PV+S+ FEFSV  Y+
Sbjct: 1   MACLDMYNSEHKGLCAPMSPRISFSNDFVESQQMIKHE-RSSREAPVSSD-FEFSVTNYS 58

Query: 456 MMPADELFFKGALLPFK-------KTTXXXXXXXXXXXXXXXVRPPKVPTKWKEFLGLKK 298
           MM ADELFFKG LLPFK       + T                RPPK  T+WK  LGLK+
Sbjct: 59  MMSADELFFKGRLLPFKDNCTNHSQKTTLREELLVVDEEEVSRRPPKGSTRWKGLLGLKR 118

Query: 297 SHILHKKPEKSEEPTERVVGVNGSKS--IHQENHISKISQEPLAN 169
           +HI  KK +K++ P      V G +S  +H+E H+ K S + + N
Sbjct: 119 THIGSKKTDKTDGPM-----VEGKRSVLVHEEAHVGKTSTQEMLN 158


>ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|222853053|gb|EEE90600.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  145 bits (367), Expect = 6e-33
 Identities = 86/175 (49%), Positives = 109/175 (62%), Gaps = 9/175 (5%)
 Frame = -3

Query: 636 MACIDMFKTDHQGLCTPMSPRISFSNDFIDTQQTIKHEHNSSIEVPVASEHFEFSVNRYT 457
           MAC+DM+ ++H+G C PMSPRISFSNDF+D+QQ +K E  SS E PV+++ FEFSV  Y+
Sbjct: 1   MACLDMYNSEHKGHCPPMSPRISFSNDFVDSQQIMKQE-RSSRETPVSTD-FEFSVTNYS 58

Query: 456 MMPADELFFKGALLPFK--------KTTXXXXXXXXXXXXXXXVRPPKVPTKWKEFLGLK 301
           MM ADELFFKG LLPFK        +T                 RPPK  T+WK  LGLK
Sbjct: 59  MMSADELFFKGRLLPFKDNGSNQMQRTIRDELLVDDDEGDEVSPRPPKGSTRWKGLLGLK 118

Query: 300 KSHILHKKPEKSEEPTERVVGVN-GSKSIHQENHISKISQEPLANKESMFGEVEM 139
           +SHI  KK +KSE   ER VG +  S  +H+E   SK SQE ++   S   +VE+
Sbjct: 119 RSHIGSKKVDKSEGSMERSVGESRRSGFVHEEVQHSKSSQEIVSEGGSSCRDVEI 173


>ref|XP_002523565.1| conserved hypothetical protein [Ricinus communis]
           gi|223537127|gb|EEF38760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score =  123 bits (309), Expect = 3e-26
 Identities = 81/186 (43%), Positives = 105/186 (56%), Gaps = 20/186 (10%)
 Frame = -3

Query: 636 MACIDMFKTDHQG-LCTPMSPRISFSNDFIDTQQTIKHEHNSSI--EVPVASEHFEFSVN 466
           MAC+DM+ ++HQG  C P+SPRISFSNDF D+QQ IK E +SS   E PV+++ FEFSV 
Sbjct: 1   MACLDMYNSEHQGQYCPPISPRISFSNDFADSQQIIKQERSSSSRSEAPVSTD-FEFSVT 59

Query: 465 RYTMMPADELFFKGALLPFKKT-------------TXXXXXXXXXXXXXXXVRPPK-VPT 328
            Y+MM ADELFFKG LLPFK                                RPPK   T
Sbjct: 60  NYSMMSADELFFKGRLLPFKDNGNNNKSNQMQRTIRDELLVDDDDGYHGVSHRPPKGSST 119

Query: 327 KWKEFLGLKKSHILHKKPEKSEEPTERVVGVNGSKSI---HQENHISKISQEPLANKESM 157
           +WK  LGLK+SHI  KK +KS    +   G + ++ +   H+E  + K SQE L+   S 
Sbjct: 120 RWKGLLGLKRSHIGSKKVDKSS--CDGSFGFDQNRRLGFAHEEMDVGKSSQELLSEGGSS 177

Query: 156 FGEVEM 139
             +VE+
Sbjct: 178 HRDVEI 183


>ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259450 [Vitis vinifera]
          Length = 154

 Score =  120 bits (300), Expect = 3e-25
 Identities = 71/148 (47%), Positives = 90/148 (60%), Gaps = 9/148 (6%)
 Frame = -3

Query: 585 MSPRISFSNDFIDTQQTIKHEHNSSIEVPVASEHFEFSVNRYTMMPADELFFKGALLPFK 406
           MSPRISFSNDF+++QQ IKHE  SS E PV+S+ FEFSV  Y+MM ADELFFKG LLPFK
Sbjct: 1   MSPRISFSNDFVESQQMIKHER-SSREAPVSSD-FEFSVTNYSMMSADELFFKGRLLPFK 58

Query: 405 -------KTTXXXXXXXXXXXXXXXVRPPKVPTKWKEFLGLKKSHILHKKPEKSEEPTER 247
                  + T                RPPK  T+WK  LGLK++HI  KK +K++ P   
Sbjct: 59  DNCTNHSQKTTLREELLVVDEEEVSRRPPKGSTRWKGLLGLKRTHIGSKKTDKTDGPM-- 116

Query: 246 VVGVNGSKS--IHQENHISKISQEPLAN 169
              V G +S  +H+E H+ K S + + N
Sbjct: 117 ---VEGKRSVLVHEEAHVGKTSTQEMLN 141


>gb|AFK37699.1| unknown [Lotus japonicus]
          Length = 176

 Score =  114 bits (284), Expect = 2e-23
 Identities = 75/181 (41%), Positives = 98/181 (54%), Gaps = 15/181 (8%)
 Frame = -3

Query: 636 MACIDMFKTDH-QGLCTPMSPRISFSNDFIDTQQTIKHEHNSSIE--VPVASEHFEFSVN 466
           MAC+DM+ ++  QG   PMSPRISFSNDF+D QQ +K E NS  +  +PV S  FEFS  
Sbjct: 1   MACLDMYNSERKQGHHHPMSPRISFSNDFVDVQQALKQERNSRSDTSLPVVSSDFEFSTT 60

Query: 465 RYTMMPADELFFKGALLPFK------------KTTXXXXXXXXXXXXXXXVRPPKVPTKW 322
            Y+MM ADELF KG LLP+K             TT                RPPK   +W
Sbjct: 61  NYSMMSADELFSKGRLLPYKDSCNNHNQMQRATTTLKEELLNNDDEYNFSRRPPK--GRW 118

Query: 321 KEFLGLKKSHILHKKPEKSEEPTERVVGVNGSKSIHQENHISKISQEPLANKESMFGEVE 142
           K  LGLKK HI  KK E+SE  ++R     G+++    +  +  SQE L    S+  ++E
Sbjct: 119 KGLLGLKKYHIGSKKVERSEGSSDR-----GAETRRLASPHNITSQEMLNEGSSICRDLE 173

Query: 141 M 139
           +
Sbjct: 174 L 174


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