BLASTX nr result

ID: Coptis21_contig00012523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012523
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545185.1| PREDICTED: serine/threonine-protein kinase T...   106   3e-21
ref|XP_003518457.1| PREDICTED: serine/threonine-protein kinase T...   103   3e-20
ref|XP_002276975.1| PREDICTED: serine/threonine-protein kinase T...   103   3e-20
emb|CAN83166.1| hypothetical protein VITISV_044158 [Vitis vinifera]   100   2e-19
ref|XP_004169578.1| PREDICTED: serine/threonine-protein kinase T...    99   8e-19

>ref|XP_003545185.1| PREDICTED: serine/threonine-protein kinase TOUSLED-like [Glycine
           max]
          Length = 679

 Score =  106 bits (265), Expect = 3e-21
 Identities = 71/141 (50%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
 Frame = +3

Query: 228 MSEDFIIQFSTKSNSSNQSDPSLPNKLAMLEARMVGKSASNSNTPVQSTWPSISSVKAG- 404
           MS+D +I FS  SNSSNQSD SLP K+A LEARMVGK   +S T  QS W S+S   AG 
Sbjct: 1   MSDDMLIHFS--SNSSNQSDQSLPTKIAKLEARMVGK--GSSTTAQQSGWSSVSVPSAGK 56

Query: 405 ------DVMEPXXXXXXXXXVGGEFLIQANTQKRQKLDEDDHSTASNSKLSETVSEARLN 566
                 ++ EP          GGEFLIQANTQKRQK  ED   +AS  +  E V++AR  
Sbjct: 57  LGGAAENLAEPSTSSDSDDDNGGEFLIQANTQKRQKFQED--GSASVFERVEVVTDARQM 114

Query: 567 IVENVDVKSGVEDSNRKKQGR 629
            +E ++ K  V D+NRKK GR
Sbjct: 115 SLETMETKINV-DANRKKHGR 134


>ref|XP_003518457.1| PREDICTED: serine/threonine-protein kinase TOUSLED-like [Glycine
           max]
          Length = 680

 Score =  103 bits (256), Expect = 3e-20
 Identities = 69/141 (48%), Positives = 85/141 (60%), Gaps = 7/141 (4%)
 Frame = +3

Query: 228 MSEDFIIQFSTKSNSSNQSDPSLPNKLAMLEARMVGKSASNSNTPVQSTWPSISSVKAG- 404
           MS+D +I FS  SNSSNQSD SLP K+A LEARMVGK +S +    QS W S S   AG 
Sbjct: 1   MSDDMLIHFS--SNSSNQSDQSLPTKIAKLEARMVGKGSSTA--AQQSGWSSASVPSAGK 56

Query: 405 ------DVMEPXXXXXXXXXVGGEFLIQANTQKRQKLDEDDHSTASNSKLSETVSEARLN 566
                 ++ EP          GG+FLIQANTQKRQKL ED   +AS  +  E V++ R  
Sbjct: 57  FGGAAENLAEPSTSSDSDDDNGGKFLIQANTQKRQKLQED--GSASVFECVEVVTDGRQT 114

Query: 567 IVENVDVKSGVEDSNRKKQGR 629
            +E V+ K+ + D NRKK GR
Sbjct: 115 SLEAVETKNNI-DVNRKKHGR 134


>ref|XP_002276975.1| PREDICTED: serine/threonine-protein kinase TOUSLED [Vitis vinifera]
           gi|296084006|emb|CBI24394.3| unnamed protein product
           [Vitis vinifera]
          Length = 679

 Score =  103 bits (256), Expect = 3e-20
 Identities = 69/140 (49%), Positives = 85/140 (60%), Gaps = 6/140 (4%)
 Frame = +3

Query: 228 MSEDFIIQFSTKSNSSNQSDPSLPNKLAMLEARMVGK--SASNSNTPVQSTWPSIS---- 389
           MS+D II FS  SNSSN SD SLP K+A LEARMVG+  SA  + +   +TW S S    
Sbjct: 1   MSDDMIIHFS--SNSSNHSDQSLPTKIAKLEARMVGRDPSAVPATSTAPATWSSASVSSK 58

Query: 390 SVKAGDVMEPXXXXXXXXXVGGEFLIQANTQKRQKLDEDDHSTASNSKLSETVSEARLNI 569
            V A ++ E           GG+FLIQANTQKRQKL EDD +   +    E V++ R  I
Sbjct: 59  FVPAENLAELGTSSDSDDDNGGDFLIQANTQKRQKLQEDDSTVFEH---VEAVADGRQKI 115

Query: 570 VENVDVKSGVEDSNRKKQGR 629
           VE ++ K+G  D NRKKQGR
Sbjct: 116 VETMETKAGF-DVNRKKQGR 134


>emb|CAN83166.1| hypothetical protein VITISV_044158 [Vitis vinifera]
          Length = 984

 Score =  100 bits (250), Expect = 2e-19
 Identities = 68/140 (48%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
 Frame = +3

Query: 228 MSEDFIIQFSTKSNSSNQSDPSLPNKLAMLEARMVGK--SASNSNTPVQSTWPSIS---- 389
           MS+D II FS  SNSSN SD SLP K+A LEARMVG+  SA  + +   +TW S S    
Sbjct: 59  MSDDMIIHFS--SNSSNHSDQSLPTKIAKLEARMVGRDPSAXPATSTAPATWSSASVSSK 116

Query: 390 SVKAGDVMEPXXXXXXXXXVGGEFLIQANTQKRQKLDEDDHSTASNSKLSETVSEARLNI 569
            V A ++ E           GG+FLIQANTQKRQKL EDD +   +    E V++ R  I
Sbjct: 117 FVPAENLAELGTSSDSDDDNGGDFLIQANTQKRQKLQEDDSTVFEH---VEAVADGRQKI 173

Query: 570 VENVDVKSGVEDSNRKKQGR 629
           VE ++ K+   D NRKKQGR
Sbjct: 174 VETMETKAXF-DVNRKKQGR 192


>ref|XP_004169578.1| PREDICTED: serine/threonine-protein kinase TOUSLED-like [Cucumis
           sativus]
          Length = 683

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 65/140 (46%), Positives = 83/140 (59%), Gaps = 6/140 (4%)
 Frame = +3

Query: 228 MSEDFIIQFSTKSNSSNQSDPSLPNKLAMLEARMVGKSAS-NSNTPVQSTWPSISS---- 392
           MS+D ++ FS  SNSSNQSD SLP K+A LEARMVGK++S       QST  S+SS    
Sbjct: 1   MSDDMLLHFS--SNSSNQSDQSLPTKMAKLEARMVGKTSSIPPPAQSQSTRTSVSSAGKF 58

Query: 393 VKAGDVMEPXXXXXXXXXVGGEFLIQANTQKRQKL-DEDDHSTASNSKLSETVSEARLNI 569
                ++EP          G  FLIQANTQKRQKL D +D +    ++  + V E + N+
Sbjct: 59  AATESLIEPSTSSDSDDGTGDGFLIQANTQKRQKLQDANDSTLPERAEAFQAVEEGKQNV 118

Query: 570 VENVDVKSGVEDSNRKKQGR 629
           VE ++ K  V D NRKKQ R
Sbjct: 119 VETIESKKNV-DVNRKKQAR 137


Top