BLASTX nr result

ID: Coptis21_contig00012510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012510
         (1840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277472.1| PREDICTED: F-box/kelch-repeat protein At1g30...   564   e-158
ref|XP_003593908.1| F-box/kelch-repeat protein [Medicago truncat...   557   e-156
ref|XP_003546081.1| PREDICTED: F-box/kelch-repeat protein At1g30...   555   e-155
ref|XP_002519667.1| Protein AFR, putative [Ricinus communis] gi|...   553   e-155
ref|XP_004149669.1| PREDICTED: F-box/kelch-repeat protein At1g30...   552   e-154

>ref|XP_002277472.1| PREDICTED: F-box/kelch-repeat protein At1g30090 [Vitis vinifera]
            gi|147822560|emb|CAN75078.1| hypothetical protein
            VITISV_005005 [Vitis vinifera]
          Length = 405

 Score =  564 bits (1453), Expect = e-158
 Identities = 267/406 (65%), Positives = 313/406 (77%)
 Frame = -2

Query: 1431 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPD 1252
            MQ VR S  QAPV KLGDS+MTLSPKFR+A                             D
Sbjct: 1    MQRVRISSQQAPVHKLGDSQMTLSPKFRLAVIQSNLLNPSLELELSLRGEPLIPGLP--D 58

Query: 1251 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 1072
            D+AL+CLLRLPV+SH +CR VCKRWHLLLG KERFF+RRKELG+QDPWLF+  + KCT K
Sbjct: 59   DIALNCLLRLPVQSHAACRAVCKRWHLLLGNKERFFTRRKELGFQDPWLFVFAFHKCTGK 118

Query: 1071 IQWQVLDLTNLSWHTIPLMPCKERICAHGFRCISTPREGTLFVFGGMASDLDTPLNLALK 892
            IQWQVLDL + SWHTIP MPCK+++C HGFRC+S P EG LFV GGM SD+D PL+L LK
Sbjct: 119  IQWQVLDLNHFSWHTIPAMPCKDKVCPHGFRCVSIPHEGALFVCGGMVSDVDCPLDLVLK 178

Query: 891  YEIHKNRWSVMNKMTTARSFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIA 712
            YE+ KNRW+VM++M TARSFFA G+IDGM+Y AGGNSSDLFEL+ A+VLDP+KG W PIA
Sbjct: 179  YEMQKNRWTVMSQMITARSFFATGVIDGMIYAAGGNSSDLFELDLAEVLDPVKGIWSPIA 238

Query: 711  SMGVNMASYDAAVHNGKLLVTEGWLWPFLFSPRGQVYNPRLNCWETMSANLREGWTGLSA 532
            SMG NMASYDAAV NGKLLVTEGWLWPF  SPRGQVY+PR N WE M+A LREGWTG S 
Sbjct: 239  SMGTNMASYDAAVLNGKLLVTEGWLWPFFVSPRGQVYDPRTNNWENMAAGLREGWTGSSV 298

Query: 531  VVDGHLFVVSEHERMKLKVYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLH 352
            VV GHLFVVSEHERMKLKVYD+++D+WE V G  +PEQI KPFSVN+ D +I+VVG NLH
Sbjct: 299  VVYGHLFVVSEHERMKLKVYDMESDNWETVEGPALPEQICKPFSVNACDCKIYVVGRNLH 358

Query: 351  VAIGHMRKLHLKCTSGKEWCFFVEWKIVNAPKTLSGWSPASSQVLF 214
            VA+GH+ +L+ K    K W F V W +V+AP+  +  +P+SSQVLF
Sbjct: 359  VAVGHIWRLNQKGNCEKNWSFGVRWHVVDAPEAFADLTPSSSQVLF 404


>ref|XP_003593908.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355482956|gb|AES64159.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 405

 Score =  557 bits (1436), Expect = e-156
 Identities = 264/406 (65%), Positives = 317/406 (78%)
 Frame = -2

Query: 1431 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPD 1252
            MQ VRFS  QAPV KLGD +MTLSPKFR+A                             D
Sbjct: 1    MQRVRFSSQQAPVHKLGDPQMTLSPKFRLAVVQSNLTSQMPELDHSLREELLIPGLP--D 58

Query: 1251 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 1072
            DVAL+CLLRLPV+SH SCR VCKRWH+LLG KERFF+ RK++G++DPWLF+  Y KCT K
Sbjct: 59   DVALNCLLRLPVQSHSSCRAVCKRWHMLLGNKERFFTNRKQMGFKDPWLFVFAYHKCTGK 118

Query: 1071 IQWQVLDLTNLSWHTIPLMPCKERICAHGFRCISTPREGTLFVFGGMASDLDTPLNLALK 892
            IQWQVLDLT+ SWHTIP MPCK+++C HGFRC+S P +GTL+V GGM SD+D PL+L LK
Sbjct: 119  IQWQVLDLTHFSWHTIPAMPCKDKVCPHGFRCVSMPHDGTLYVCGGMVSDVDCPLDLVLK 178

Query: 891  YEIHKNRWSVMNKMTTARSFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIA 712
            YEI KNRW+VMN+M +ARSFFA G+IDGMVY AGGNS+DL+EL+SA+VLDPI G+W+ IA
Sbjct: 179  YEITKNRWTVMNRMISARSFFASGVIDGMVYAAGGNSTDLYELDSAEVLDPISGNWRAIA 238

Query: 711  SMGVNMASYDAAVHNGKLLVTEGWLWPFLFSPRGQVYNPRLNCWETMSANLREGWTGLSA 532
            +MG NMASYDAAV NGKLLVTEGWLWPF  SPRGQVY+PR N WETM+  LREGWTG S 
Sbjct: 239  NMGTNMASYDAAVLNGKLLVTEGWLWPFYVSPRGQVYDPRTNSWETMAVGLREGWTGSSV 298

Query: 531  VVDGHLFVVSEHERMKLKVYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLH 352
            VV GHLFVVSE ERMKLKVY+ + DSWE + GSP+PEQI KPF+VN+ D +I+VVG NL 
Sbjct: 299  VVYGHLFVVSELERMKLKVYNQEADSWEAIDGSPLPEQICKPFAVNACDCQIYVVGRNLL 358

Query: 351  VAIGHMRKLHLKCTSGKEWCFFVEWKIVNAPKTLSGWSPASSQVLF 214
            VA+GH+ KL+ K +  ++W F V+W ++ APK+LS  +P+SSQVLF
Sbjct: 359  VAVGHISKLNPKESCKEKWNFGVQWHVIEAPKSLSNLTPSSSQVLF 404


>ref|XP_003546081.1| PREDICTED: F-box/kelch-repeat protein At1g30090-like [Glycine max]
          Length = 405

 Score =  555 bits (1431), Expect = e-155
 Identities = 262/406 (64%), Positives = 315/406 (77%)
 Frame = -2

Query: 1431 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPD 1252
            MQ VRFS  QAPV KLGD +MTLSPKFR+A                             D
Sbjct: 1    MQRVRFSSQQAPVHKLGDPQMTLSPKFRLAVIQSSLANPSPELELSLREEPLIPGLP--D 58

Query: 1251 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 1072
            DVAL+CLLRLPV+SH SCR VCKRWH+LLG KERFF+ RK+ G +DPWLF+  Y KCT K
Sbjct: 59   DVALNCLLRLPVQSHSSCRAVCKRWHMLLGNKERFFTNRKQFGLKDPWLFVFAYHKCTGK 118

Query: 1071 IQWQVLDLTNLSWHTIPLMPCKERICAHGFRCISTPREGTLFVFGGMASDLDTPLNLALK 892
            I+WQVLDLT+ SWHTIP MPCK+++C HGFRC+S P +GTLFV GGM SD+D PL+L LK
Sbjct: 119  IKWQVLDLTHFSWHTIPAMPCKDKVCPHGFRCVSIPCDGTLFVCGGMVSDVDCPLDLVLK 178

Query: 891  YEIHKNRWSVMNKMTTARSFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIA 712
            YE+ KNRW+VMN+M TARSFFA G+IDGM+YVAGGNS+DL+EL+SA+VLDP+ GSW+PIA
Sbjct: 179  YEMQKNRWTVMNRMITARSFFASGVIDGMIYVAGGNSTDLYELDSAEVLDPLNGSWRPIA 238

Query: 711  SMGVNMASYDAAVHNGKLLVTEGWLWPFLFSPRGQVYNPRLNCWETMSANLREGWTGLSA 532
            +MG NMASYDAAV NGKLLVTEGWLWPF  SPRGQVY+PR N WE M+  LREGWTG S 
Sbjct: 239  NMGTNMASYDAAVLNGKLLVTEGWLWPFYVSPRGQVYDPRTNNWENMAVGLREGWTGSSV 298

Query: 531  VVDGHLFVVSEHERMKLKVYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLH 352
            VV GHLFVVSE ERMKLKVYD +TDSWE + G P+PEQIRKPF+VN+ D  I+VVG NL 
Sbjct: 299  VVYGHLFVVSELERMKLKVYDPETDSWEAIEGLPLPEQIRKPFAVNACDCHIYVVGQNLV 358

Query: 351  VAIGHMRKLHLKCTSGKEWCFFVEWKIVNAPKTLSGWSPASSQVLF 214
            V +GH+ +L+ K +  ++W F V W +++AP+++S  +P+SSQVLF
Sbjct: 359  VGVGHITRLNPKESCKEKWNFSVRWHVIDAPESVSDLTPSSSQVLF 404


>ref|XP_002519667.1| Protein AFR, putative [Ricinus communis] gi|223541084|gb|EEF42640.1|
            Protein AFR, putative [Ricinus communis]
          Length = 465

 Score =  553 bits (1424), Expect = e-155
 Identities = 267/424 (62%), Positives = 317/424 (74%)
 Frame = -2

Query: 1485 LLSYQKRISI*ISLHKGKMQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXX 1306
            ++ ++K +   I+ HK KMQ VR S  QAPV KLGDS+MTLSPKFR+A            
Sbjct: 44   IIVFKKALYAFITEHK-KMQRVRLSSQQAPVHKLGDSQMTLSPKFRLAVVQSSLLSSSSE 102

Query: 1305 XXXXXXXXXXXXXXXXPDDVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKEL 1126
                             DDVAL+CLLRLPV+SH SCR VCKRWHLLLG KERFF+RRKEL
Sbjct: 103  SELALQGEPFIPGLP--DDVALNCLLRLPVQSHASCRAVCKRWHLLLGNKERFFTRRKEL 160

Query: 1125 GYQDPWLFICTYQKCTSKIQWQVLDLTNLSWHTIPLMPCKERICAHGFRCISTPREGTLF 946
            G+ DPWL++  ++KCT KIQWQVLDLT+  WHTIP MPCK+++C HGFRC S P +GTLF
Sbjct: 161  GFNDPWLYVFAFRKCTGKIQWQVLDLTHFLWHTIPAMPCKDKVCPHGFRCASIPLDGTLF 220

Query: 945  VFGGMASDLDTPLNLALKYEIHKNRWSVMNKMTTARSFFACGIIDGMVYVAGGNSSDLFE 766
            V GGM SD+D PL+L LKYE+ KNRW+VMN+M  ARSFFA   I+GM+YVAGGNS+DLFE
Sbjct: 221  VCGGMVSDVDCPLDLVLKYEMQKNRWTVMNQMIAARSFFASAAINGMIYVAGGNSTDLFE 280

Query: 765  LESADVLDPIKGSWQPIASMGVNMASYDAAVHNGKLLVTEGWLWPFLFSPRGQVYNPRLN 586
            L+SA+V DP+KG+WQ IASMG NMASYDAAV +GKLLVTEGWLWPF  SPRGQVY+PR +
Sbjct: 281  LDSAEVFDPVKGNWQSIASMGTNMASYDAAVLDGKLLVTEGWLWPFYVSPRGQVYDPRTD 340

Query: 585  CWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLKVYDVKTDSWEVVAGSPVPEQIRKP 406
             WE M+  LREGWTG S VV G LFVVSE ERMKLKVYD+  DSWE + G P+PEQI KP
Sbjct: 341  RWENMAVGLREGWTGSSVVVYGRLFVVSELERMKLKVYDMDNDSWETIEGPPLPEQICKP 400

Query: 405  FSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKEWCFFVEWKIVNAPKTLSGWSPASS 226
            F+VN+ D +I+VVG NLHVA+GH+ KL    T GK W F V W +V+ P   S  +P+SS
Sbjct: 401  FAVNACDCKIYVVGRNLHVAVGHITKLKQNTTCGKRWSFSVTWHVVDPPDIFSDLTPSSS 460

Query: 225  QVLF 214
            QVLF
Sbjct: 461  QVLF 464


>ref|XP_004149669.1| PREDICTED: F-box/kelch-repeat protein At1g30090-like [Cucumis
            sativus]
          Length = 405

 Score =  552 bits (1422), Expect = e-154
 Identities = 264/406 (65%), Positives = 312/406 (76%)
 Frame = -2

Query: 1431 MQHVRFSCHQAPVQKLGDSKMTLSPKFRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPD 1252
            MQ VR S  Q PV KLGDS+MTLSPKFR+A                             D
Sbjct: 1    MQRVRLSSQQTPVLKLGDSQMTLSPKFRLAIIKSHLLNPSSDLESSICGEPLIPGLP--D 58

Query: 1251 DVALDCLLRLPVESHPSCRVVCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSK 1072
            DVAL+CLLRLPV SH +CRVVCKRWH LLG+KERFF+RRKELG+++PWLF+  + KCT K
Sbjct: 59   DVALNCLLRLPVHSHAACRVVCKRWHQLLGSKERFFTRRKELGFKEPWLFVFAFHKCTGK 118

Query: 1071 IQWQVLDLTNLSWHTIPLMPCKERICAHGFRCISTPREGTLFVFGGMASDLDTPLNLALK 892
            IQWQVLDLT+ SWH+IPLMPCK+++C HGFRC+S P EGTLFV GGM SD+D PL+L LK
Sbjct: 119  IQWQVLDLTHFSWHSIPLMPCKDKVCPHGFRCVSIPHEGTLFVCGGMVSDVDCPLDLVLK 178

Query: 891  YEIHKNRWSVMNKMTTARSFFACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIA 712
            YE+ KNRW+VMN+M TARSFFA G+IDG +YVAGGNS+DLFEL+SA+VLDPI+G+W  +A
Sbjct: 179  YEMQKNRWTVMNQMITARSFFASGVIDGKIYVAGGNSTDLFELDSAEVLDPIQGNWNSVA 238

Query: 711  SMGVNMASYDAAVHNGKLLVTEGWLWPFLFSPRGQVYNPRLNCWETMSANLREGWTGLSA 532
            SMG NMASYDAAV NGKLLVTEGWLWPF  +PRGQVY+P  N WETM+  LREGWTG S 
Sbjct: 239  SMGTNMASYDAAVLNGKLLVTEGWLWPFYVAPRGQVYDPTTNNWETMAIGLREGWTGSSV 298

Query: 531  VVDGHLFVVSEHERMKLKVYDVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLH 352
            VV GHLFVVSE ERMKLKVYD  +DSWE + G P+PEQI KPF+VN+ DS I+VVG NLH
Sbjct: 299  VVYGHLFVVSELERMKLKVYDAASDSWEAIEGPPLPEQICKPFAVNACDSTIYVVGRNLH 358

Query: 351  VAIGHMRKLHLKCTSGKEWCFFVEWKIVNAPKTLSGWSPASSQVLF 214
            VA+G + +L  K T   +W F V W +V+AP+  S  +P+SSQVLF
Sbjct: 359  VAVGRISQLIKKGTCENKWSFNVSWHVVDAPECFSDLTPSSSQVLF 404


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