BLASTX nr result

ID: Coptis21_contig00012491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012491
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitoc...   113   2e-23
gb|AFK40357.1| unknown [Lotus japonicus]                              113   3e-23
ref|XP_002520006.1| conserved hypothetical protein [Ricinus comm...   111   8e-23
ref|XP_002885787.1| predicted protein [Arabidopsis lyrata subsp....   110   2e-22
ref|NP_565319.1| scramblase-related protein [Arabidopsis thalian...   109   3e-22

>ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitochondria protein 25-like
           [Vitis vinifera] gi|297737362|emb|CBI26563.3| unnamed
           protein product [Vitis vinifera]
          Length = 412

 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/71 (77%), Positives = 60/71 (84%)
 Frame = +2

Query: 2   LLTDAGQYVIRFGDVDHKSKSGPATKIQDLEVGRPMTLSERAVALALAVSLDNDYFSRHG 181
           + TDAGQYVIRFG  D  SKSGPA  IQ+LEV RP+TLSERAVA+ALAVSLDNDYFSRHG
Sbjct: 342 IFTDAGQYVIRFGSSDPNSKSGPAKAIQELEVVRPLTLSERAVAVALAVSLDNDYFSRHG 401

Query: 182 GWGLPFFLVTE 214
           GWG+PF  V E
Sbjct: 402 GWGIPFVAVDE 412


>gb|AFK40357.1| unknown [Lotus japonicus]
          Length = 280

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/71 (77%), Positives = 60/71 (84%)
 Frame = +2

Query: 2   LLTDAGQYVIRFGDVDHKSKSGPATKIQDLEVGRPMTLSERAVALALAVSLDNDYFSRHG 181
           +LTDAGQYVIRFG  D  SK G A  IQDLEV RP+TL+ERAVA+ALA+SLDNDYFSRHG
Sbjct: 210 ILTDAGQYVIRFGSSDPSSKIGLAFAIQDLEVSRPLTLAERAVAVALAISLDNDYFSRHG 269

Query: 182 GWGLPFFLVTE 214
           GWGLPF  VTE
Sbjct: 270 GWGLPFMAVTE 280


>ref|XP_002520006.1| conserved hypothetical protein [Ricinus communis]
           gi|223540770|gb|EEF42330.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score =  111 bits (278), Expect = 8e-23
 Identities = 53/71 (74%), Positives = 59/71 (83%)
 Frame = +2

Query: 2   LLTDAGQYVIRFGDVDHKSKSGPATKIQDLEVGRPMTLSERAVALALAVSLDNDYFSRHG 181
           + TDAGQYVIRFG  D  SK+GPA  IQ+LEV RP+TLSERAVA+ALA+SLDNDYFSRH 
Sbjct: 330 IFTDAGQYVIRFGSSDPSSKTGPAAAIQELEVARPLTLSERAVAVALAISLDNDYFSRHS 389

Query: 182 GWGLPFFLVTE 214
           GWGLPF  V E
Sbjct: 390 GWGLPFVAVGE 400


>ref|XP_002885787.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331627|gb|EFH62046.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 390

 Score =  110 bits (275), Expect = 2e-22
 Identities = 51/71 (71%), Positives = 59/71 (83%)
 Frame = +2

Query: 2   LLTDAGQYVIRFGDVDHKSKSGPATKIQDLEVGRPMTLSERAVALALAVSLDNDYFSRHG 181
           + TDAGQYVIRFG  D  +K+GPAT I++LEV RP+TLSERAV L LA+SLDNDYFSRHG
Sbjct: 320 IFTDAGQYVIRFGKADAAAKTGPATMIEELEVKRPLTLSERAVVLTLAISLDNDYFSRHG 379

Query: 182 GWGLPFFLVTE 214
           GWG+PF  V E
Sbjct: 380 GWGIPFMAVGE 390


>ref|NP_565319.1| scramblase-related protein [Arabidopsis thaliana]
           gi|4585925|gb|AAD25585.1| expressed protein [Arabidopsis
           thaliana] gi|20260644|gb|AAM13220.1| unknown protein
           [Arabidopsis thaliana] gi|24899825|gb|AAN65127.1|
           unknown protein [Arabidopsis thaliana]
           gi|330250796|gb|AEC05890.1| scramblase-related protein
           [Arabidopsis thaliana]
          Length = 392

 Score =  109 bits (273), Expect = 3e-22
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +2

Query: 2   LLTDAGQYVIRFGDVDHKSKSGPATKIQDLEVGRPMTLSERAVALALAVSLDNDYFSRHG 181
           + TDAGQYVIRFG  D  +K+GPAT +++LEV RP+TLSERAV L LA+SLDNDYFSRHG
Sbjct: 322 IFTDAGQYVIRFGKADAAAKTGPATLVEELEVKRPLTLSERAVVLTLAISLDNDYFSRHG 381

Query: 182 GWGLPFFLVTE 214
           GWG+PF  V E
Sbjct: 382 GWGIPFMAVGE 392


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