BLASTX nr result

ID: Coptis21_contig00012448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012448
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257...   614   e-173
ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164
ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218...   580   e-163
ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like...   560   e-157
ref|XP_002518251.1| conserved hypothetical protein [Ricinus comm...   560   e-157

>ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera]
            gi|297737934|emb|CBI27135.3| unnamed protein product
            [Vitis vinifera]
          Length = 552

 Score =  614 bits (1583), Expect = e-173
 Identities = 316/476 (66%), Positives = 363/476 (76%), Gaps = 2/476 (0%)
 Frame = -3

Query: 1477 VLVEKLSFEIKGIEKLDTQWFSTSKTPAPGSKHRRGERAFLECSTPSFISNQIVSSGGTK 1298
            +LVE LSFEIKGIEKLD+QW++T K P PGSK RRGE  FL+C+TPS +SNQIVS+G  K
Sbjct: 80   LLVEMLSFEIKGIEKLDSQWYATQK-PLPGSKQRRGEHTFLDCATPSIVSNQIVSAGAVK 138

Query: 1297 TYLVRAELPKIIPPTYRGTTIRYFYYVRSTLVGRWLVRENGQFRRESLKDLIQLEDRTPL 1118
            TY+ R ELP I+PP+YRG TIRYFYYVR TL GRWLV ENG   RES KDLI+LE R PL
Sbjct: 139  TYVARTELPSIVPPSYRGATIRYFYYVRCTLSGRWLVLENGHSPRESRKDLIELEARIPL 198

Query: 1117 QVWVSHNTSGLLVEEGLSDGILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXX 938
            Q+WV+  TSGLL+EEG +DGI+P + + MD+YWKE D DS+W RANET + +EEGYE   
Sbjct: 199  QIWVTQKTSGLLIEEGHNDGIVPNTAIQMDVYWKEMDGDSDWVRANETYDGVEEGYESSR 258

Query: 937  XXXXXXXSYNPTRGNIDHAQGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVD 758
                   SYNP + NI  + GSSLS  S + +      PYL G+R+S SSYVALP+LSV 
Sbjct: 259  DEVSSVSSYNPMKENIHKSFGSSLSLHSFSAR---SSTPYLEGERTSISSYVALPRLSVA 315

Query: 757  EFLYDSSGDLQSPKKKYPDLLSPSRHGNHTNSLSNDDDTGVPSGPRTIERVASEGFVRGR 578
            E + DSS D  S +K   + LSPS     T  +S DD+ GV + P T +  ASEGF+RGR
Sbjct: 316  EVINDSSLDALSSQKSSAN-LSPSEQRKDTKPISADDEAGVSTIPGTDDPAASEGFIRGR 374

Query: 577  SYNIRLDDQVLLQFSPKNSDSTYYFGDTIGGTLAFSH-EGARRCLEVAITLEITETIAQR 401
            SYNIRLDDQVLL+FSPKNSDSTYYF D IGGTL F H EGARRCLEV+ITLE +ET+ +R
Sbjct: 375  SYNIRLDDQVLLRFSPKNSDSTYYFSDMIGGTLTFFHEEGARRCLEVSITLESSETVNRR 434

Query: 400  IVHPSRRNSPTITKVQSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHISVQWALRFEFFT 221
              HPSRRNS TITKVQSDHHEVVADL QTSFLF IPMDGPMSFSTPH+SVQWALRFEFFT
Sbjct: 435  FAHPSRRNSLTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTPHVSVQWALRFEFFT 494

Query: 220  TRKNVDWTRYDHPLLIEGRDKGEWVLPITVHVPPPRT-QTAQTRNKKSSSLVPIWV 56
            T KNVD TRY+HPLLIEGRDK EWVLPITVH  P  T   A TRN KS +L P+WV
Sbjct: 495  TPKNVDLTRYEHPLLIEGRDKCEWVLPITVHATPSGTAAAAHTRNDKSFTLEPLWV 550


>ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1|
            predicted protein [Populus trichocarpa]
          Length = 533

 Score =  584 bits (1506), Expect = e-164
 Identities = 297/479 (62%), Positives = 355/479 (74%), Gaps = 5/479 (1%)
 Frame = -3

Query: 1477 VLVEKLSFEIKGIEKLDTQWFSTSKTPAPGSKHRRGERAFLECSTPSFISNQIVSSGGTK 1298
            +L+EKL F I+GI+KLD QWF+T K P PGSK RRGE  F++CST S +SNQIVSSG TK
Sbjct: 64   LLIEKLGFAIRGIQKLDNQWFATQK-PLPGSKQRRGEHVFMDCSTSSIVSNQIVSSGATK 122

Query: 1297 TYLVRAELPKIIPPTYRGTTIRYFYYVRSTLVGRWLVRENGQFRRESLKDLIQLEDRTPL 1118
            TY+VR  LP IIPP+YRG TIRY YYV STL G+ L+ +N    RES KDL+QLEDR PL
Sbjct: 123  TYVVRTLLPSIIPPSYRGATIRYIYYVESTLSGQQLMLDNTNSHRESSKDLLQLEDRIPL 182

Query: 1117 QVWVSHNTSGLLVEEGLSDGILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXX 938
            Q+WV+   +GL+VEEG SDGI+P +T+ +DIYWKE D D+EWARAN+  + +EEG+E   
Sbjct: 183  QIWVAQKGNGLIVEEGQSDGIVPPTTIQLDIYWKEMDGDNEWARANDLDDGVEEGHESLR 242

Query: 937  XXXXXXXSYNPTRGNIDHAQGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVD 758
                   SYNP R +I    GSSLS L S  +  ++DA +  G R S S+ +ALP+LS  
Sbjct: 243  DEISSVSSYNPNRESIHKTFGSSLS-LQSVARSSNKDASFTEGGRRSLST-LALPRLSAA 300

Query: 757  EFLYDSSGDLQSPKKKYPDLLSPSRHGNHTNSLSNDDDTGVPSGPRTI----ERVASEGF 590
            E LYDS  D+  P K    ++ PS+          DD  GV   P T+    E  ASEGF
Sbjct: 301  EVLYDSGADMAEPDKSSA-MVFPSQQ-------LRDDMAGVSYTPGTVSVNNEPAASEGF 352

Query: 589  VRGRSYNIRLDDQVLLQFSPKNSDSTYYFGDTIGGTLAFSHE-GARRCLEVAITLEITET 413
            +RGRSYNIR+DD VLL+FSP+NSDSTYYF D IGGTL F HE GA++CLEV+ITLE +ET
Sbjct: 353  IRGRSYNIRMDDHVLLRFSPRNSDSTYYFSDMIGGTLTFFHEEGAKKCLEVSITLETSET 412

Query: 412  IAQRIVHPSRRNSPTITKVQSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHISVQWALRF 233
            +++R +HPSR+NSPTITKVQSDHHEVVADL QTSFLF IPMDGPMSFST H+SVQW LRF
Sbjct: 413  VSRRYIHPSRKNSPTITKVQSDHHEVVADLVQTSFLFSIPMDGPMSFSTSHVSVQWVLRF 472

Query: 232  EFFTTRKNVDWTRYDHPLLIEGRDKGEWVLPITVHVPPPRTQTAQTRNKKSSSLVPIWV 56
            EFFTT KNVDWTRY+HPLLIEGRDK EWVLPITVH PPPR   A +RN+K  SL P+WV
Sbjct: 473  EFFTTPKNVDWTRYEHPLLIEGRDKSEWVLPITVHAPPPRASAAHSRNEKGFSLEPLWV 531


>ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218523 [Cucumis sativus]
          Length = 538

 Score =  580 bits (1494), Expect = e-163
 Identities = 289/477 (60%), Positives = 360/477 (75%), Gaps = 3/477 (0%)
 Frame = -3

Query: 1477 VLVEKLSFEIKGIEKLDTQWFSTSKTPAPGSKHRRGERAFLECSTPSFISNQIVSSGGTK 1298
            +L+E+L FEI G+ KLD QWFST K P PGSK RRGE  F++CS  S +S+QI+SSG  K
Sbjct: 63   LLIERLRFEIIGLHKLDAQWFSTQK-PIPGSKQRRGEHIFMDCSVQSIVSSQIISSGAMK 121

Query: 1297 TYLVRAELPKIIPPTYRGTTIRYFYYVRSTLVGRWLVRENGQFRRESLKDLIQLEDRTPL 1118
            +Y+VR+ LP  IPP+Y+G TIRY YYV+STL+GRWL +ENG+  +ES KD I++E R PL
Sbjct: 122  SYVVRSTLPTCIPPSYKGATIRYMYYVKSTLLGRWLSQENGRSHKESPKDQIEMEARLPL 181

Query: 1117 QVWVSHNTSGLLVEEGLSDGILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXX 938
            QVWV+  T+G+L+EEG +DG L + +  MD++WKE +SD++W RAN+  +  +EGY+   
Sbjct: 182  QVWVTQKTNGMLMEEGQNDGDLSSLSFQMDVFWKEMESDTDWIRANDIYDGTDEGYDSSR 241

Query: 937  XXXXXXXSYNPTRGNIDHAQGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVD 758
                   SYNP R       GSSLS  SSA +   + AP++ G+R S SS VA P++SV 
Sbjct: 242  DEISSVSSYNPMREPFHRTFGSSLSLQSSAGRSSIKIAPFIEGERLSLSSNVARPRVSVA 301

Query: 757  EFLYDSSGDLQSPKKKYPDLLSPSRHGNHTNSLSNDDDTGVPSGPR--TIERVASEGFVR 584
            E LY+S+ D+ SP+K +   +SPS+  N   + S DDD G  + PR  TIE VASEGF+R
Sbjct: 302  EVLYESA-DVASPQKSFA-AVSPSQVLNFEKNQSTDDDAGAATSPRPKTIEPVASEGFIR 359

Query: 583  GRSYNIRLDDQVLLQFSPKNSDSTYYFGDTIGGTLAFSH-EGARRCLEVAITLEITETIA 407
            GRSYNIR+DDQVLL+F PKNSDSTYYF D IGGTL F H EG RRCLE++ITLE +ET++
Sbjct: 360  GRSYNIRVDDQVLLRFCPKNSDSTYYFSDMIGGTLTFFHEEGTRRCLELSITLETSETVS 419

Query: 406  QRIVHPSRRNSPTITKVQSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHISVQWALRFEF 227
            +R +HPSRRNSPTI KVQSDH+EVVADL QTSFLF IPMDGPMSFSTPH+S+QWALRFEF
Sbjct: 420  RRFIHPSRRNSPTIVKVQSDHYEVVADLIQTSFLFSIPMDGPMSFSTPHVSLQWALRFEF 479

Query: 226  FTTRKNVDWTRYDHPLLIEGRDKGEWVLPITVHVPPPRTQTAQTRNKKSSSLVPIWV 56
            FTT KNVDWTRY+HPLLIEGR+K EWVLPITVH PP    TAQ RN +  SL P+W+
Sbjct: 480  FTTPKNVDWTRYEHPLLIEGREKSEWVLPITVHAPPSSAATAQNRNDRPFSLEPLWM 536


>ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago
            truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi
            transport protein RGP1-like protein [Medicago truncatula]
          Length = 529

 Score =  560 bits (1444), Expect = e-157
 Identities = 278/476 (58%), Positives = 352/476 (73%), Gaps = 3/476 (0%)
 Frame = -3

Query: 1474 LVEKLSFEIKGIEKLDTQWFSTSKTPAPGSKHRRGERAFLECSTPSFISNQIVSSGGTKT 1295
            L+E+LSFEI+GIEKLDTQWF+T K P PGS+ RRGE  F++ STP  ++NQI+++G +K+
Sbjct: 62   LMERLSFEIRGIEKLDTQWFATQK-PLPGSRQRRGEHVFVDSSTPILVANQIINAGTSKS 120

Query: 1294 YLVRAELPKIIPPTYRGTTIRYFYYVRSTLVGRWLVRENGQFRRESLKDLIQLEDRTPLQ 1115
            Y+VR  LP IIPP+Y+G+ IRY YYV+S + G WL+ ENGQ R E   D+  LE R PLQ
Sbjct: 121  YVVRTMLPSIIPPSYKGSNIRYLYYVKSAITGGWLILENGQSRTEPTNDVTDLEVRIPLQ 180

Query: 1114 VWVSHNTSGLLVEEGLSDGILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXXX 935
            +WV+  +SG      L D I+P +T+ +DI+WKE D D++W RAN+  + +E+GY+    
Sbjct: 181  IWVNQKSSGF----PLDDDIVPLTTVQLDIFWKEMDGDADWVRANDIYDGVEDGYDSSRD 236

Query: 934  XXXXXXSYNPTRGNIDHAQGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVDE 755
                  SYNP + N+    GSSLS  SS+ + L+R    L G R+S SS +ALP+LSV E
Sbjct: 237  DISSVSSYNPMKENMVRGFGSSLSLRSSSARSLNR----LEGHRTSLSSNIALPRLSVAE 292

Query: 754  FLYDSSGDLQSPKKKYPDLLSPSRHGNHTNSLSNDDDTGVPSGPRT--IERVASEGFVRG 581
             L D+  D  S +K +  ++SP+         S +DD GV S P    +E ++SEGF+RG
Sbjct: 293  VLSDTGADALSTQKSFT-MVSPTEQQKFGKQFSAEDDAGVSSSPEAGPVESLSSEGFIRG 351

Query: 580  RSYNIRLDDQVLLQFSPKNSDSTYYFGDTIGGTLAFSHE-GARRCLEVAITLEITETIAQ 404
            RSYNIRLDDQVLL+FSPKNSDSTYYF D IGGTL F HE G RRCLE+++TLE +ETI +
Sbjct: 352  RSYNIRLDDQVLLKFSPKNSDSTYYFSDMIGGTLTFFHEQGGRRCLEISVTLETSETINR 411

Query: 403  RIVHPSRRNSPTITKVQSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHISVQWALRFEFF 224
            R VHPSRRNSPTITKVQSDHHEVVADL QTSFLF +P+DGPM+FSTPH+SVQW LRFEF+
Sbjct: 412  RFVHPSRRNSPTITKVQSDHHEVVADLAQTSFLFSVPVDGPMTFSTPHVSVQWVLRFEFY 471

Query: 223  TTRKNVDWTRYDHPLLIEGRDKGEWVLPITVHVPPPRTQTAQTRNKKSSSLVPIWV 56
            TT K VDWT+Y+HPLLIEGR+K EWVLPITVH PPPRT T+ +RN+K  SL P+WV
Sbjct: 472  TTPKFVDWTKYEHPLLIEGREKTEWVLPITVHAPPPRTPTSGSRNEKLFSLDPMWV 527


>ref|XP_002518251.1| conserved hypothetical protein [Ricinus communis]
            gi|223542598|gb|EEF44137.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 528

 Score =  560 bits (1443), Expect = e-157
 Identities = 286/477 (59%), Positives = 344/477 (72%), Gaps = 3/477 (0%)
 Frame = -3

Query: 1477 VLVEKLSFEIKGIEKLDTQWFSTSKTPAPGSKHRRGERAFLECSTPSFISNQIVSSGGTK 1298
            +L+E+L FEIKGIEKLD QWFST K P PGS H RGE  F+  S PS +SNQI+SS  +K
Sbjct: 77   LLIERLGFEIKGIEKLDPQWFSTHK-PLPGSAHSRGEHVFMVSSIPSLVSNQILSSAASK 135

Query: 1297 TYLVRAELPKIIPPTYRGTTIRYFYYVRSTLVGRWLVRENGQFRRESLKDLIQLEDRTPL 1118
            +Y+VR ELP I+PPT+RG+TIRYFYYV+ TL GRWL  ENG   RES KDLI+L+ R PL
Sbjct: 136  SYVVRVELPSILPPTFRGSTIRYFYYVKGTLCGRWLTLENGHSHRESSKDLIELDARVPL 195

Query: 1117 QVWVSHNTSGLLVEEGLSDGILPASTLSMDIYWKEKDSDSEWARANETPEAIEEGYEXXX 938
             +WV+  ++GLL+EE  SDGI+PA+TL +D+YWK  D DSEWAR N+  + +EEGY+   
Sbjct: 196  NIWVTQKSNGLLMEEDQSDGIVPATTLQLDVYWKAMDGDSEWARVNDNDDGVEEGYDSSR 255

Query: 937  XXXXXXXSYNPTRGNIDHAQGSSLSRLSSAPKFLSRDAPYLHGDRSSFSSYVALPQLSVD 758
                   SYNP++ ++    GSSLS  S A              R+S SS V  P+LSV 
Sbjct: 256  DEISSVSSYNPSKESMHRTFGSSLSLQSFAA-------------RTSLSSNVGFPRLSVA 302

Query: 757  EFLYDSSGDLQSPKKKYPDLLSPSRHGNHTNSLSNDDDTGVPS--GPRTIERVASEGFVR 584
            E L+D S D+ S ++   +++ P            +D  G  S  G  T E  ASEGF+R
Sbjct: 303  EVLHDPSADVSSQQQ---NIVKPQ----------TEDVVGESSAHGIGTNEASASEGFIR 349

Query: 583  GRSYNIRLDDQVLLQFSPKNSDSTYYFGDTIGGTLAFSHE-GARRCLEVAITLEITETIA 407
            GRSYNIR+DDQVLL+FSPKNSDS YYF D IGGTL F HE G RRCLEV+ITLEI+ETI+
Sbjct: 350  GRSYNIRMDDQVLLRFSPKNSDSNYYFSDMIGGTLTFFHEEGCRRCLEVSITLEISETIS 409

Query: 406  QRIVHPSRRNSPTITKVQSDHHEVVADLGQTSFLFCIPMDGPMSFSTPHISVQWALRFEF 227
            +R VH SRRN+P ITKVQSDHHEVVADL QTSFLF +P+DGPMSFSTPH+SVQWALRFEF
Sbjct: 410  RRFVHSSRRNAPIITKVQSDHHEVVADLVQTSFLFSVPLDGPMSFSTPHVSVQWALRFEF 469

Query: 226  FTTRKNVDWTRYDHPLLIEGRDKGEWVLPITVHVPPPRTQTAQTRNKKSSSLVPIWV 56
            +TT KNVDWTRY+HPLL+EGRDK EWVLPITVH PPP    A TR+ K  SL P+WV
Sbjct: 470  YTTPKNVDWTRYEHPLLVEGRDKSEWVLPITVHAPPPGALAAHTRDAKHFSLEPLWV 526


Top