BLASTX nr result

ID: Coptis21_contig00012423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012423
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169455.1| PREDICTED: LOW QUALITY PROTEIN: ATP-citrate ...    57   5e-07
ref|XP_004148805.1| PREDICTED: ATP-citrate synthase beta chain p...    57   5e-07
ref|XP_004144209.1| PREDICTED: ATP-citrate synthase beta chain p...    57   5e-07
gb|AFO64345.1| putative ATP citrate lyase [Saccharum hybrid cult...    57   5e-07
ref|XP_003567578.1| PREDICTED: ATP-citrate synthase beta chain p...    57   5e-07

>ref|XP_004169455.1| PREDICTED: LOW QUALITY PROTEIN: ATP-citrate synthase beta chain
           protein 1-like [Cucumis sativus]
          Length = 609

 Score = 57.4 bits (137), Expect(2) = 5e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +1

Query: 523 YLGIAIGGDVFPGSTLSDHILRFNNIPR 606
           Y GIAIGGDVFPGSTLSDHILRFNNIP+
Sbjct: 195 YEGIAIGGDVFPGSTLSDHILRFNNIPQ 222



 Score = 21.9 bits (45), Expect(2) = 5e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 602 LDQVRMMVVLGE 637
           + QV+MMVVLGE
Sbjct: 220 IPQVKMMVVLGE 231


>ref|XP_004148805.1| PREDICTED: ATP-citrate synthase beta chain protein 1-like [Cucumis
           sativus]
          Length = 608

 Score = 57.4 bits (137), Expect(2) = 5e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +1

Query: 523 YLGIAIGGDVFPGSTLSDHILRFNNIPR 606
           Y GIAIGGDVFPGSTLSDHILRFNNIP+
Sbjct: 195 YEGIAIGGDVFPGSTLSDHILRFNNIPQ 222



 Score = 21.9 bits (45), Expect(2) = 5e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 602 LDQVRMMVVLGE 637
           + QV+MMVVLGE
Sbjct: 220 IPQVKMMVVLGE 231


>ref|XP_004144209.1| PREDICTED: ATP-citrate synthase beta chain protein 1-like [Cucumis
           sativus] gi|449530217|ref|XP_004172092.1| PREDICTED:
           ATP-citrate synthase beta chain protein 1-like [Cucumis
           sativus]
          Length = 608

 Score = 57.4 bits (137), Expect(2) = 5e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +1

Query: 523 YLGIAIGGDVFPGSTLSDHILRFNNIPR 606
           Y GIAIGGDVFPGSTLSDHILRFNNIP+
Sbjct: 195 YEGIAIGGDVFPGSTLSDHILRFNNIPQ 222



 Score = 21.9 bits (45), Expect(2) = 5e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 602 LDQVRMMVVLGE 637
           + QV+MMVVLGE
Sbjct: 220 IPQVKMMVVLGE 231


>gb|AFO64345.1| putative ATP citrate lyase [Saccharum hybrid cultivar GT28]
          Length = 608

 Score = 57.4 bits (137), Expect(2) = 5e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +1

Query: 523 YLGIAIGGDVFPGSTLSDHILRFNNIPR 606
           Y GIAIGGDVFPGSTLSDHILRFNNIP+
Sbjct: 195 YEGIAIGGDVFPGSTLSDHILRFNNIPQ 222



 Score = 21.9 bits (45), Expect(2) = 5e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 602 LDQVRMMVVLGE 637
           + QV+MMVVLGE
Sbjct: 220 IPQVKMMVVLGE 231


>ref|XP_003567578.1| PREDICTED: ATP-citrate synthase beta chain protein 1-like
           [Brachypodium distachyon]
          Length = 608

 Score = 57.4 bits (137), Expect(2) = 5e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +1

Query: 523 YLGIAIGGDVFPGSTLSDHILRFNNIPR 606
           Y GIAIGGDVFPGSTLSDHILRFNNIP+
Sbjct: 195 YEGIAIGGDVFPGSTLSDHILRFNNIPQ 222



 Score = 21.9 bits (45), Expect(2) = 5e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 602 LDQVRMMVVLGE 637
           + QV+MMVVLGE
Sbjct: 220 IPQVKMMVVLGE 231


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