BLASTX nr result

ID: Coptis21_contig00012421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012421
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163071.1| PREDICTED: 50S ribosomal protein L10, chloro...   273   5e-71
ref|XP_004143603.1| PREDICTED: 50S ribosomal protein L10, chloro...   273   5e-71
gb|ABK23199.1| unknown [Picea sitchensis] gi|224285611|gb|ACN405...   270   3e-70
ref|XP_003610379.1| 50S ribosomal protein L10 [Medicago truncatu...   269   8e-70
sp|O80362.1|RK10_TOBAC RecName: Full=50S ribosomal protein L10, ...   266   6e-69

>ref|XP_004163071.1| PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Cucumis
           sativus]
          Length = 235

 Score =  273 bits (697), Expect = 5e-71
 Identities = 129/164 (78%), Positives = 148/164 (90%)
 Frame = -1

Query: 692 LENCYLVAGIKYKGLTVKQFQQLRSALPETVKLVVAKNTLVGKAIEGTQWEALKPCMKGM 513
           LE+CYL+AGIKYKG TVKQFQ+LR +LPET KL+VAKNTLV KAIEGT WEALKPCMKGM
Sbjct: 71  LEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGM 130

Query: 512 NAWMFVHTEEIPAALKPYRDFQKERKLEDNDFTGGVFEGKYYEPSEFKQLESMPTKAEIY 333
           N W+FVH+EEIPAA+KPYRDFQKE+KLEDNDFTG VFEGKYY P EFK LE+MP++AE+Y
Sbjct: 131 NVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSRAEVY 190

Query: 332 ANLLGSLQSPASALVATLQAPARDLVMVLKAYVQKLEEQENNGG 201
           A +LG LQ+PAS+LV T+QAPAR+L+MVLKAYVQKLEEQ   GG
Sbjct: 191 AKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGG 234


>ref|XP_004143603.1| PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Cucumis
           sativus]
          Length = 235

 Score =  273 bits (697), Expect = 5e-71
 Identities = 129/164 (78%), Positives = 148/164 (90%)
 Frame = -1

Query: 692 LENCYLVAGIKYKGLTVKQFQQLRSALPETVKLVVAKNTLVGKAIEGTQWEALKPCMKGM 513
           LE+CYL+AGIKYKG TVKQFQ+LR +LPET KL+VAKNTLV KAIEGT WEALKPCMKGM
Sbjct: 71  LEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGM 130

Query: 512 NAWMFVHTEEIPAALKPYRDFQKERKLEDNDFTGGVFEGKYYEPSEFKQLESMPTKAEIY 333
           N W+FVH+EEIPAA+KPYRDFQKE+KLEDNDFTG VFEGKYY P EFK LE+MP++AE+Y
Sbjct: 131 NVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSRAEVY 190

Query: 332 ANLLGSLQSPASALVATLQAPARDLVMVLKAYVQKLEEQENNGG 201
           A +LG LQ+PAS+LV T+QAPAR+L+MVLKAYVQKLEEQ   GG
Sbjct: 191 AKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGG 234


>gb|ABK23199.1| unknown [Picea sitchensis] gi|224285611|gb|ACN40524.1| unknown
           [Picea sitchensis] gi|224285667|gb|ACN40549.1| unknown
           [Picea sitchensis]
          Length = 256

 Score =  270 bits (691), Expect = 3e-70
 Identities = 129/165 (78%), Positives = 145/165 (87%)
 Frame = -1

Query: 692 LENCYLVAGIKYKGLTVKQFQQLRSALPETVKLVVAKNTLVGKAIEGTQWEALKPCMKGM 513
           LENCYLVAGIKY GLTVKQ Q+LR +LPE+ KLVVAKN LVGKAIEGT WE LKPCMKGM
Sbjct: 91  LENCYLVAGIKYTGLTVKQLQELRKSLPESTKLVVAKNKLVGKAIEGTAWEVLKPCMKGM 150

Query: 512 NAWMFVHTEEIPAALKPYRDFQKERKLEDNDFTGGVFEGKYYEPSEFKQLESMPTKAEIY 333
           NAWMFVH+EEIPAALKPYR+FQK++KLE+NDFTG VFEGK+Y P EFK LE+MPT+AEIY
Sbjct: 151 NAWMFVHSEEIPAALKPYRNFQKQQKLEENDFTGAVFEGKFYSPQEFKALETMPTRAEIY 210

Query: 332 ANLLGSLQSPASALVATLQAPARDLVMVLKAYVQKLEEQENNGGS 198
           A +LGSLQSPA  L++TLQAPARDLV  LKAYVQKLEE+  N  +
Sbjct: 211 AKILGSLQSPAIGLISTLQAPARDLVFTLKAYVQKLEEESGNASN 255


>ref|XP_003610379.1| 50S ribosomal protein L10 [Medicago truncatula]
           gi|217071998|gb|ACJ84359.1| unknown [Medicago
           truncatula] gi|355511434|gb|AES92576.1| 50S ribosomal
           protein L10 [Medicago truncatula]
           gi|388522083|gb|AFK49103.1| unknown [Medicago
           truncatula]
          Length = 234

 Score =  269 bits (687), Expect = 8e-70
 Identities = 125/160 (78%), Positives = 146/160 (91%)
 Frame = -1

Query: 692 LENCYLVAGIKYKGLTVKQFQQLRSALPETVKLVVAKNTLVGKAIEGTQWEALKPCMKGM 513
           LENCYL+AGI YKG TVKQFQ+LR  LPET KLVVAKNTLV KA+EGTQWE LKPCM GM
Sbjct: 69  LENCYLLAGINYKGFTVKQFQELRKTLPETTKLVVAKNTLVYKALEGTQWETLKPCMTGM 128

Query: 512 NAWMFVHTEEIPAALKPYRDFQKERKLEDNDFTGGVFEGKYYEPSEFKQLESMPTKAEIY 333
           N W+FVHTEEIP+A+KPYRDFQKE+KLE+NDFTG VFEGK+Y P EFK+LE++PT+ EIY
Sbjct: 129 NVWLFVHTEEIPSAIKPYRDFQKEKKLEENDFTGAVFEGKFYGPDEFKKLETLPTRGEIY 188

Query: 332 ANLLGSLQSPASALVATLQAPARDLVMVLKAYVQKLEEQE 213
           ANLLGSL+SP+SALV T+QAPAR+L+MVLKA+++KLEEQE
Sbjct: 189 ANLLGSLKSPSSALVTTIQAPARELIMVLKAHIKKLEEQE 228


>sp|O80362.1|RK10_TOBAC RecName: Full=50S ribosomal protein L10, chloroplastic; AltName:
           Full=CL10; Flags: Precursor gi|3298441|dbj|BAA31511.1|
           chloroplast ribosomal protein L10 [Nicotiana tabacum]
          Length = 227

 Score =  266 bits (679), Expect = 6e-69
 Identities = 130/166 (78%), Positives = 151/166 (90%)
 Frame = -1

Query: 692 LENCYLVAGIKYKGLTVKQFQQLRSALPETVKLVVAKNTLVGKAIEGTQWEALKPCMKGM 513
           LE+CYL+AGI YKGLTVKQFQ+LRS LP+T KL+VAKNTLV KAIEGT+WEALKPCMKGM
Sbjct: 65  LEDCYLLAGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTKWEALKPCMKGM 124

Query: 512 NAWMFVHTEEIPAALKPYRDFQKERKLEDNDFTGGVFEGKYYEPSEFKQLESMPTKAEIY 333
           NAW+FVH+EEIPAALKPYR FQKE+KLE+NDFTG VFEGK+Y P EFK LE++PT+AEIY
Sbjct: 125 NAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKALETLPTRAEIY 184

Query: 332 ANLLGSLQSPASALVATLQAPARDLVMVLKAYVQKLEEQENNGGSK 195
           A LLGSL+ PASA+V T+QAPAR+LVMVLKAYV+KLEE+   GGS+
Sbjct: 185 AQLLGSLKGPASAVVGTIQAPARNLVMVLKAYVKKLEEE---GGSQ 227


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