BLASTX nr result

ID: Coptis21_contig00012408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012408
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177024.1| putative nitrite transporter [Arabidopsis thali...   251   4e-65
ref|XP_002887190.1| proton-dependent oligopeptide transport fami...   250   1e-64
dbj|BAJ33669.1| unnamed protein product [Thellungiella halophila]     249   1e-64
ref|XP_003516828.1| PREDICTED: probable nitrite transporter At1g...   243   9e-63
ref|XP_002282337.2| PREDICTED: probable nitrite transporter At1g...   242   3e-62

>ref|NP_177024.1| putative nitrite transporter [Arabidopsis thaliana]
           gi|75266596|sp|Q9SX20.1|PTR18_ARATH RecName:
           Full=Probable nitrite transporter At1g68570
           gi|5734721|gb|AAD49986.1|AC008075_19 Similar to
           gb|AF023472 peptide transporter from Hordeum vulgare and
           is a member of the PF|00854 Peptide transporter family.
           ESTs gb|T41927 and gb|AA395024 come from this gene
           [Arabidopsis thaliana] gi|20147231|gb|AAM10330.1|
           At1g68570/F24J5_7 [Arabidopsis thaliana]
           gi|25090385|gb|AAN72289.1| At1g68570/F24J5_7
           [Arabidopsis thaliana] gi|110742209|dbj|BAE99031.1|
           peptide transporter like [Arabidopsis thaliana]
           gi|332196691|gb|AEE34812.1| putative nitrite transporter
           [Arabidopsis thaliana]
          Length = 596

 Score =  251 bits (641), Expect = 4e-65
 Identities = 117/144 (81%), Positives = 129/144 (89%)
 Frame = +1

Query: 1   GLDRGITFLQRMGIGLAISILATLVAGFVEIKRKNVAIAHGLIDQPHATIPISVFWLVPQ 180
           GL+RGITFL RMGIG  ISI+ATLVAGFVE+KRK+VAI HGL+D+PH  +PIS  WL+PQ
Sbjct: 405 GLERGITFLHRMGIGFVISIIATLVAGFVEVKRKSVAIEHGLLDKPHTIVPISFLWLIPQ 464

Query: 181 YGLHGIAEAFMSIGHLEFLYDQAPESMRSTAAALFWTAISIGNYVSTFLVTLVHKYSAKP 360
           YGLHG+AEAFMSIGHLEF YDQAPESMRSTA ALFW AISIGNYVST LVTLVHK+SAKP
Sbjct: 465 YGLHGVAEAFMSIGHLEFFYDQAPESMRSTATALFWMAISIGNYVSTLLVTLVHKFSAKP 524

Query: 361 DGSNWLPDTNLNKGKLENLYWLIT 432
           DGSNWLPD NLN+G+LE  YWLIT
Sbjct: 525 DGSNWLPDNNLNRGRLEYFYWLIT 548


>ref|XP_002887190.1| proton-dependent oligopeptide transport family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297333031|gb|EFH63449.1|
           proton-dependent oligopeptide transport family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score =  250 bits (638), Expect = 1e-64
 Identities = 117/144 (81%), Positives = 128/144 (88%)
 Frame = +1

Query: 1   GLDRGITFLQRMGIGLAISILATLVAGFVEIKRKNVAIAHGLIDQPHATIPISVFWLVPQ 180
           GL+RGITFL RMGIG  ISI+ATLVAGFVEIKRK+VAI HGL+D+PH  +PIS  WL+PQ
Sbjct: 406 GLERGITFLHRMGIGFVISIIATLVAGFVEIKRKSVAIEHGLLDKPHTIVPISFLWLIPQ 465

Query: 181 YGLHGIAEAFMSIGHLEFLYDQAPESMRSTAAALFWTAISIGNYVSTFLVTLVHKYSAKP 360
           YGLHG+AEAFMSIGHLEF YDQ PESMRSTA ALFW AISIGNYVST LVTLVHK+SAKP
Sbjct: 466 YGLHGVAEAFMSIGHLEFFYDQVPESMRSTATALFWMAISIGNYVSTLLVTLVHKFSAKP 525

Query: 361 DGSNWLPDTNLNKGKLENLYWLIT 432
           DGSNWLPD NLN+G+LE  YWLIT
Sbjct: 526 DGSNWLPDNNLNRGRLEYFYWLIT 549


>dbj|BAJ33669.1| unnamed protein product [Thellungiella halophila]
          Length = 598

 Score =  249 bits (637), Expect = 1e-64
 Identities = 118/144 (81%), Positives = 127/144 (88%)
 Frame = +1

Query: 1   GLDRGITFLQRMGIGLAISILATLVAGFVEIKRKNVAIAHGLIDQPHATIPISVFWLVPQ 180
           GL+RGITFL RMGIG  ISI+ATLVAGFVEIKRK VAI HGL+D+PH  +PIS  WL+PQ
Sbjct: 407 GLERGITFLHRMGIGFVISIIATLVAGFVEIKRKRVAIEHGLLDKPHTVVPISFLWLIPQ 466

Query: 181 YGLHGIAEAFMSIGHLEFLYDQAPESMRSTAAALFWTAISIGNYVSTFLVTLVHKYSAKP 360
           Y LHGIAEAFMSIGHLEF YDQAPESMRSTA ALFW AISIGNYVST LVTLVHK+SAKP
Sbjct: 467 YSLHGIAEAFMSIGHLEFFYDQAPESMRSTATALFWMAISIGNYVSTLLVTLVHKFSAKP 526

Query: 361 DGSNWLPDTNLNKGKLENLYWLIT 432
           DGSNWLPD NLN+G+LE  YWLIT
Sbjct: 527 DGSNWLPDNNLNRGRLEYFYWLIT 550


>ref|XP_003516828.1| PREDICTED: probable nitrite transporter At1g68570-like [Glycine
           max]
          Length = 576

 Score =  243 bits (621), Expect = 9e-63
 Identities = 117/144 (81%), Positives = 125/144 (86%)
 Frame = +1

Query: 1   GLDRGITFLQRMGIGLAISILATLVAGFVEIKRKNVAIAHGLIDQPHATIPISVFWLVPQ 180
           GLDRGI+FL RMGIG  IS LATLVAGFVE+KRK  A+AHGL D PHA IPISVFWLVPQ
Sbjct: 390 GLDRGISFLHRMGIGFVISTLATLVAGFVEMKRKKAALAHGLFDHPHAIIPISVFWLVPQ 449

Query: 181 YGLHGIAEAFMSIGHLEFLYDQAPESMRSTAAALFWTAISIGNYVSTFLVTLVHKYSAKP 360
           Y LHG+AEAFMSIGHLEF YDQAPESMRSTA ALFWTAI+ GNYVST +VTLVHK+SA  
Sbjct: 450 YSLHGMAEAFMSIGHLEFFYDQAPESMRSTAMALFWTAIAAGNYVSTIMVTLVHKFSAGS 509

Query: 361 DGSNWLPDTNLNKGKLENLYWLIT 432
           +GSNWLPD NLNKGKLE  YWLIT
Sbjct: 510 NGSNWLPDNNLNKGKLEYFYWLIT 533


>ref|XP_002282337.2| PREDICTED: probable nitrite transporter At1g68570 [Vitis vinifera]
          Length = 672

 Score =  242 bits (617), Expect = 3e-62
 Identities = 115/144 (79%), Positives = 127/144 (88%)
 Frame = +1

Query: 1   GLDRGITFLQRMGIGLAISILATLVAGFVEIKRKNVAIAHGLIDQPHATIPISVFWLVPQ 180
           GLDRGITFLQRM IG  ISI+ATLVAGFVE+KRK  A A+GL++ P +TIPISV WLVPQ
Sbjct: 486 GLDRGITFLQRMWIGFVISIVATLVAGFVEVKRKQAASAYGLVNSPKSTIPISVLWLVPQ 545

Query: 181 YGLHGIAEAFMSIGHLEFLYDQAPESMRSTAAALFWTAISIGNYVSTFLVTLVHKYSAKP 360
           Y LHGIAEAFMSIGHLEF YDQAPESM+ST +ALFWTAI+ GN+VSTFLV+LVHKYSA P
Sbjct: 546 YSLHGIAEAFMSIGHLEFFYDQAPESMKSTGSALFWTAIAFGNFVSTFLVSLVHKYSAGP 605

Query: 361 DGSNWLPDTNLNKGKLENLYWLIT 432
           DGSNWLPD NLNKGKLE  YWL+T
Sbjct: 606 DGSNWLPDDNLNKGKLEKFYWLLT 629


Top