BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012407
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containi...   207   3e-51
ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containi...   170   4e-40
ref|XP_003533047.1| PREDICTED: uncharacterized protein LOC100788...   165   1e-38
ref|NP_189412.1| uncharacterized protein [Arabidopsis thaliana] ...   164   2e-38
ref|XP_002875401.1| hypothetical protein ARALYDRAFT_905030 [Arab...   162   1e-37

>ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
           gi|297743240|emb|CBI36107.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  207 bits (526), Expect = 3e-51
 Identities = 106/176 (60%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
 Frame = -1

Query: 734 SYIPIRCGPRDNRGPLQKGRILSTEAMQAIQALKRA-KSDPTKLDSLISKTLTRLIKTDL 558
           SY PIRCGPRDNRGPL KGR+LS EA+QAIQ+LKRA + DPTK+D  +SKTL+RL+K DL
Sbjct: 27  SYTPIRCGPRDNRGPLMKGRVLSIEAIQAIQSLKRAHRGDPTKIDDFLSKTLSRLVKADL 86

Query: 557 ISSLNELLRQNHCGLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDRXXXXXX 378
           +++LNELLRQ+ C LAL+VFS VR+E WYKT+ SLYAD+V  L+R GM E+IDR      
Sbjct: 87  LATLNELLRQDQCDLALRVFSAVRSELWYKTELSLYADLVSALARKGMKEEIDRLICDLE 146

Query: 377 XXXXXXNDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGSMYEVDEYVVKVLSR 210
                  D K I RL++A++AAER++S VRIYG++K  G G     DEYV +VLSR
Sbjct: 147 GEGSVRCDDKGIVRLVKAVIAAERRDSTVRIYGLMKRSGCGG---GDEYVGRVLSR 199


>ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449491766|ref|XP_004158997.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 230

 Score =  170 bits (430), Expect = 4e-40
 Identities = 90/184 (48%), Positives = 127/184 (69%), Gaps = 4/184 (2%)
 Frame = -1

Query: 749 TKPKLSYIPIRCGPRDNRGPLQKGRILSTEAMQAIQALKRA-KSDPTKLDSLISKTLTRL 573
           T P      +RCGPRDNRGPL KGR LS EA+QAIQ+LKRA +SDPTKL  ++S TL+RL
Sbjct: 24  TSPVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRL 83

Query: 572 IKTDLISSLNELLRQNHCGLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDR- 396
           +K DL+++L ELLRQ  C LAL+VF+ +++E  Y+ +  LYA++   LSRNG  E+IDR 
Sbjct: 84  LKADLVATLKELLRQERCALALEVFAVIKSE--YRAELGLYAEVAAALSRNGAAEEIDRL 141

Query: 395 --XXXXXXXXXXXXNDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGSMYEVDEYVVK 222
                         +D K + +LI+A+++  R+ES VRIY +++  G GSM + D+Y++K
Sbjct: 142 VSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRKGWGSMIKADDYMIK 201

Query: 221 VLSR 210
           VLS+
Sbjct: 202 VLSK 205


>ref|XP_003533047.1| PREDICTED: uncharacterized protein LOC100788379 [Glycine max]
          Length = 238

 Score =  165 bits (417), Expect = 1e-38
 Identities = 94/182 (51%), Positives = 126/182 (69%), Gaps = 4/182 (2%)
 Frame = -1

Query: 749 TKPKLSYIPIRCG-PRDNRGPLQKGRILSTEAMQAIQALKRA-KSDPTKLDSLISKTLTR 576
           T P+  Y+ +RCG PR +R PL KGRILS EA+QAIQ LKR  +++P +L SL+S TLTR
Sbjct: 22  TTPRWGYVRVRCGGPRSHRTPLVKGRILSIEAIQAIQTLKRLHRTNPPELTSLVSNTLTR 81

Query: 575 LIKTDLISSLNELLRQNHCGLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDR 396
           LIK+DL+++L ELLRQ HC +AL+VFST+R+E  Y  D SLYA+M   L+ N M + +DR
Sbjct: 82  LIKSDLLATLRELLRQQHCTIALRVFSTLRSE--YGADLSLYAEMAQTLAANDMTDHLDR 139

Query: 395 --XXXXXXXXXXXXNDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGSMYEVDEYVVK 222
                         +D K ++ LI+A+VAA  +ES VRIYG++   G GS+ E DEYVV+
Sbjct: 140 LILDLASENEIKCGDDHKGLASLIKAVVAARSRESTVRIYGLMNKSGYGSVTEPDEYVVE 199

Query: 221 VL 216
           VL
Sbjct: 200 VL 201


>ref|NP_189412.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9294480|dbj|BAB02699.1| unnamed protein product
           [Arabidopsis thaliana] gi|49660179|gb|AAT68380.1|
           hypothetical protein At3g27750 [Arabidopsis thaliana]
           gi|60547779|gb|AAX23853.1| hypothetical protein
           At3g27750 [Arabidopsis thaliana]
           gi|332643839|gb|AEE77360.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  164 bits (416), Expect = 2e-38
 Identities = 96/179 (53%), Positives = 126/179 (70%), Gaps = 1/179 (0%)
 Frame = -1

Query: 743 PKLSYIPIRCGPRDNRGPLQKGRILSTEAMQAIQALKRAKSDPTKLDSLISKTLTRLIKT 564
           PK +++ IRCGPRDNRGPL KGRILSTEA+Q+IQ+LKRA      L SL  + L RLIK+
Sbjct: 24  PKRTFVSIRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSL-SLTLRPLRRLIKS 82

Query: 563 DLISSLNELLRQNHCGLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDRXXXX 384
           DLIS L ELLRQ++C LA+ V ST+RTEY    D  LYAD+V  L+RN   ++IDR    
Sbjct: 83  DLISVLRELLRQDYCTLAVHVLSTLRTEY-PPLDLVLYADIVNALTRNKEFDEIDRLIGE 141

Query: 383 XXXXXXXXNDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGS-MYEVDEYVVKVLSR 210
                   +D K +++LIRA+V AER+ES+VR+Y +++  G GS  +E DEYV +VLS+
Sbjct: 142 IDGIDQRSDD-KALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSK 199


>ref|XP_002875401.1| hypothetical protein ARALYDRAFT_905030 [Arabidopsis lyrata subsp.
           lyrata] gi|297321239|gb|EFH51660.1| hypothetical protein
           ARALYDRAFT_905030 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  162 bits (409), Expect = 1e-37
 Identities = 95/179 (53%), Positives = 125/179 (69%), Gaps = 1/179 (0%)
 Frame = -1

Query: 743 PKLSYIPIRCGPRDNRGPLQKGRILSTEAMQAIQALKRAKSDPTKLDSLISKTLTRLIKT 564
           PK   + IRCGPRDNRGPL KGRILSTEA+Q+IQ+LKRA    + + SL  + L RLIK+
Sbjct: 22  PKRRLVSIRCGPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGSSI-SLTLRPLRRLIKS 80

Query: 563 DLISSLNELLRQNHCGLALKVFSTVRTEYWYKTDCSLYADMVLGLSRNGMLEDIDRXXXX 384
           DL+S L ELLRQ++C LA+ V ST+R+EY    D  LYAD+V  LSRN   ++IDR    
Sbjct: 81  DLVSVLRELLRQDYCTLAVHVLSTLRSEY-PPLDLVLYADIVNALSRNKEFDEIDRLIGE 139

Query: 383 XXXXXXXXNDCKDISRLIRALVAAERKESLVRIYGVLKNGGAGS-MYEVDEYVVKVLSR 210
                   +D K +++LIRA+V AER+ES+VR+Y +L+  G GS  +E DEYV +VLS+
Sbjct: 140 IEIIDQRSDD-KALAKLIRAVVGAERRESVVRVYTLLRESGWGSESWEADEYVAEVLSK 197