BLASTX nr result

ID: Coptis21_contig00012404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012404
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB40375.1| starch synthase, isoform V [Vigna unguiculata]        422   e-115
ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana] gi|122...   420   e-115
ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788...   420   e-115
ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum] gi...   420   e-115
ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...   419   e-115

>emb|CAB40375.1| starch synthase, isoform V [Vigna unguiculata]
          Length = 874

 Score =  422 bits (1084), Expect = e-115
 Identities = 203/262 (77%), Positives = 232/262 (88%)
 Frame = +2

Query: 2    LHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEALRKNLKLSSA 181
            LH+TL+++SKKF+G+LNGIDTD W+P+TD FL+VQYNA+D QGK ENKEALR+NL LSSA
Sbjct: 613  LHSTLSTHSKKFIGILNGIDTDIWNPATDPFLQVQYNANDLQGKSENKEALRRNLGLSSA 672

Query: 182  DSTQPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVEHIQREFEGIAKQFQS 361
            D  +PLVGCITRLVPQKGVHLIRHAIY TLELGGQFVLLGSSPV HIQREFEGIA  FQ+
Sbjct: 673  DVRRPLVGCITRLVPQKGVHLIRHAIYLTLELGGQFVLLGSSPVPHIQREFEGIANHFQN 732

Query: 362  HPHIRLILKYDEALSHLIYAASDMFVIPSIFEPCGLTQMISMRYGAVPIARKTGGLNDSV 541
            H HIRLILKYDE+LSH IYAASDMF+IPSIFEPCGLTQMISMRYGA+PIARKTGGLNDSV
Sbjct: 733  HDHIRLILKYDESLSHAIYAASDMFIIPSIFEPCGLTQMISMRYGAIPIARKTGGLNDSV 792

Query: 542  FDVDDDTIPLHFRNGFTFVTADEQGANSALERAFNHYRKSSESWQQLIQRNMKIDFSWDS 721
            FDVDDDTIP  FRNGFTF+ ADE+G N AL RA N +    +SW+QL+Q++M IDFSWDS
Sbjct: 793  FDVDDDTIPSQFRNGFTFLNADEKGINDALVRAINLFTNDPKSWKQLVQKDMNIDFSWDS 852

Query: 722  SASQYTDLYEKSVARAKSSKRA 787
            SA+QY +LY KSV R +++KRA
Sbjct: 853  SAAQYEELYSKSVTRGRATKRA 874


>ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana]
            gi|122230204|sp|Q0WVX5.1|SSY4_ARATH RecName:
            Full=Probable starch synthase 4,
            chloroplastic/amyloplastic; Short=AtSS4; AltName:
            Full=Soluble starch synthase IV; Flags: Precursor
            gi|110741548|dbj|BAE98723.1| starch synthase-like protein
            [Arabidopsis thaliana] gi|332658615|gb|AEE84015.1| starch
            synthase 4 [Arabidopsis thaliana]
          Length = 1040

 Score =  420 bits (1080), Expect = e-115
 Identities = 199/258 (77%), Positives = 230/258 (89%)
 Frame = +2

Query: 2    LHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEALRKNLKLSSA 181
            LH+TLN +SKKF+G+LNGIDTDSW+P+TD FLK Q+NA D QGK ENK ALRK L LSSA
Sbjct: 778  LHSTLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSA 837

Query: 182  DSTQPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVEHIQREFEGIAKQFQS 361
            +S +PLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPV HIQREFEGI +QF+S
Sbjct: 838  ESRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKS 897

Query: 362  HPHIRLILKYDEALSHLIYAASDMFVIPSIFEPCGLTQMISMRYGAVPIARKTGGLNDSV 541
            H H+RL+LKYDEALSH IYAASD+F+IPSIFEPCGLTQMI+MRYG++PIARKTGGLNDSV
Sbjct: 898  HDHVRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSV 957

Query: 542  FDVDDDTIPLHFRNGFTFVTADEQGANSALERAFNHYRKSSESWQQLIQRNMKIDFSWDS 721
            FD+DDDTIP  F+NGFTF TADEQG N ALERAFNHY+K  E W +L+++ M IDFSW S
Sbjct: 958  FDIDDDTIPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFSWGS 1017

Query: 722  SASQYTDLYEKSVARAKS 775
            SA+QY +LY +SV+RA++
Sbjct: 1018 SATQYEELYTRSVSRARA 1035


>ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788308 [Glycine max]
          Length = 989

 Score =  420 bits (1079), Expect = e-115
 Identities = 202/262 (77%), Positives = 232/262 (88%)
 Frame = +2

Query: 2    LHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEALRKNLKLSSA 181
            LH+TL+++SKKF+G+LNGIDTD+W+P+TD FL VQYNA D QGK ENK+ALR+NL LSS 
Sbjct: 728  LHSTLSAHSKKFIGILNGIDTDAWNPATDAFLPVQYNATDLQGKAENKQALRRNLGLSST 787

Query: 182  DSTQPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVEHIQREFEGIAKQFQS 361
            D  +PLVGCITRLVPQKGVHLIRHAIY TLELGGQFVLLGSSPV HIQ EFEGIA  FQ+
Sbjct: 788  DVRRPLVGCITRLVPQKGVHLIRHAIYLTLELGGQFVLLGSSPVPHIQNEFEGIANHFQN 847

Query: 362  HPHIRLILKYDEALSHLIYAASDMFVIPSIFEPCGLTQMISMRYGAVPIARKTGGLNDSV 541
            H HIRLILKYDE+LSH+IYAASDMF+IPSIFEPCGLTQMISMRYGA+PI RKTGGLNDSV
Sbjct: 848  HDHIRLILKYDESLSHVIYAASDMFIIPSIFEPCGLTQMISMRYGAIPIVRKTGGLNDSV 907

Query: 542  FDVDDDTIPLHFRNGFTFVTADEQGANSALERAFNHYRKSSESWQQLIQRNMKIDFSWDS 721
            FDVDDDTIP  FRNGFTFV ADEQG N AL RAFN +  + ESW+QL+Q++M IDFSW++
Sbjct: 908  FDVDDDTIPSQFRNGFTFVNADEQGLNGALVRAFNLFNNNPESWKQLVQKDMNIDFSWET 967

Query: 722  SASQYTDLYEKSVARAKSSKRA 787
            S++QY +LY KSVARAK++K A
Sbjct: 968  SSAQYEELYLKSVARAKAAKLA 989


>ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum] gi|247643234|gb|ACT09058.1|
            starch synthase IV precursor [Solanum lycopersicum]
          Length = 1001

 Score =  420 bits (1079), Expect = e-115
 Identities = 199/261 (76%), Positives = 232/261 (88%)
 Frame = +2

Query: 2    LHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEALRKNLKLSSA 181
            LH T+NS+SKKF G+LNGIDT +W+P++D+FLKVQY+A D  GK+ENKEALR+ L LSS+
Sbjct: 740  LHATINSHSKKFAGILNGIDTAAWNPASDNFLKVQYSASDIDGKIENKEALRRLLGLSSS 799

Query: 182  DSTQPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVEHIQREFEGIAKQFQS 361
            D  QPLVGCITRLVPQKGVHLIRHA+YRTLELGGQFVLLGSSPV HIQREFE IA  FQ+
Sbjct: 800  DFRQPLVGCITRLVPQKGVHLIRHAVYRTLELGGQFVLLGSSPVPHIQREFEDIANHFQN 859

Query: 362  HPHIRLILKYDEALSHLIYAASDMFVIPSIFEPCGLTQMISMRYGAVPIARKTGGLNDSV 541
            H H RL+LKYDEALSHLIYAASDM +IPSIFEPCGLTQMI+MRYG++PIARKTGGLNDSV
Sbjct: 860  HEHARLVLKYDEALSHLIYAASDMLIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSV 919

Query: 542  FDVDDDTIPLHFRNGFTFVTADEQGANSALERAFNHYRKSSESWQQLIQRNMKIDFSWDS 721
            FDVDDD+IPL FRNGFTF TADEQG N+ALERAFN+Y  + E W++ +Q++M IDFSWDS
Sbjct: 920  FDVDDDSIPLQFRNGFTFATADEQGFNNALERAFNYYMNNYEIWKEFVQKDMSIDFSWDS 979

Query: 722  SASQYTDLYEKSVARAKSSKR 784
            SASQY +LYEK+V RA+++ R
Sbjct: 980  SASQYEELYEKAVLRARAASR 1000


>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
            gi|297740652|emb|CBI30834.3| unnamed protein product
            [Vitis vinifera]
          Length = 1011

 Score =  419 bits (1076), Expect = e-115
 Identities = 198/259 (76%), Positives = 233/259 (89%)
 Frame = +2

Query: 2    LHTTLNSYSKKFVGVLNGIDTDSWDPSTDDFLKVQYNADDPQGKLENKEALRKNLKLSSA 181
            LH+TLNS+SKKF+G+LNGIDTD+WDP+TD +LK Q+NA+D QGK ENKEALRK+L LS A
Sbjct: 750  LHSTLNSHSKKFIGILNGIDTDAWDPATDVYLKSQFNANDLQGKAENKEALRKHLGLSYA 809

Query: 182  DSTQPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVEHIQREFEGIAKQFQS 361
            D+ +PLVGCI RLVPQKG+HLIRHAIYRTLELGGQFVLLGSSPV HIQ EFEGIA  F+ 
Sbjct: 810  DTRRPLVGCIARLVPQKGIHLIRHAIYRTLELGGQFVLLGSSPVPHIQVEFEGIANHFKG 869

Query: 362  HPHIRLILKYDEALSHLIYAASDMFVIPSIFEPCGLTQMISMRYGAVPIARKTGGLNDSV 541
              HIRLILKYDE+LSH IYAASDMF+IPS+FEPCGLTQMI+MRYG++PIARKTGGLNDSV
Sbjct: 870  DDHIRLILKYDESLSHSIYAASDMFLIPSMFEPCGLTQMIAMRYGSIPIARKTGGLNDSV 929

Query: 542  FDVDDDTIPLHFRNGFTFVTADEQGANSALERAFNHYRKSSESWQQLIQRNMKIDFSWDS 721
            FDVDDDTIPL FRNG+TF+  DEQG N ALERAFNHY+ + ESWQ+L++++M IDFSW+S
Sbjct: 930  FDVDDDTIPLQFRNGYTFLNPDEQGLNGALERAFNHYKTNKESWQKLVKKDMNIDFSWES 989

Query: 722  SASQYTDLYEKSVARAKSS 778
            SA QY ++YEKSVARA+++
Sbjct: 990  SALQYEEIYEKSVARARAT 1008


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