BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012403
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
emb|CBI20737.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    55   6e-06
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 1580

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
 Frame = +3

Query: 279 MNLSRKGFP--NVTLNTGIKATALNPNAAEFVPFSLRSTPGSTSPGEASA-WDTSGT 440
           M+LS+KG P  N+ L++  K T LNPNAAEFVPF+LRS+ GSTS G+ASA +  SGT
Sbjct: 1   MSLSKKGNPINNIKLDSTAKVTTLNPNAAEFVPFALRSSSGSTSTGDASARFTPSGT 57


>emb|CBI20737.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
 Frame = +3

Query: 279 MNLSRKGFP--NVTLNTGIKATALNPNAAEFVPFSLRSTPGSTSPGEASA-WDTSGT 440
           M+LS+KG P  N+ L++  K T LNPNAAEFVPF+LRS+ GSTS G+ASA +  SGT
Sbjct: 1   MSLSKKGNPINNIKLDSTAKVTTLNPNAAEFVPFALRSSSGSTSTGDASARFTPSGT 57


>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
 Frame = +3

Query: 279 MNLSRKGFPN--VTLNTGIKATALNPNAAEFVPFSLRSTP-GSTSPGEASAWDTSGT 440
           MN+S+KG     V LN G K TALNPNAAEF+PF+LR++P GS+S  + +   +SGT
Sbjct: 1   MNVSKKGTQTSEVKLNIGSKVTALNPNAAEFIPFALRASPVGSSSAPDLTERFSSGT 57


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
 Frame = +3

Query: 279 MNLSRKGFPN--VTLNTGIKATALNPNAAEFVPFSLRSTP-GSTSPGEASAWDTSGT 440
           MN+S+KG     V LN G K TALNPNAAEF+PF+LR++P GS+S  + +   +SGT
Sbjct: 1   MNVSKKGTQTSEVKLNIGSKVTALNPNAAEFIPFALRASPVGSSSAPDLTERFSSGT 57