BLASTX nr result

ID: Coptis21_contig00012397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012397
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062125.1| Os08g0493900 [Oryza sativa Japonica Group] g...   155   3e-36
ref|XP_002282940.1| PREDICTED: probable elongator complex protei...   155   3e-36
ref|XP_004170294.1| PREDICTED: elongator complex protein 2-like ...   155   5e-36
ref|XP_004135387.1| PREDICTED: elongator complex protein 2-like ...   155   5e-36
ref|XP_003574691.1| PREDICTED: elongator complex protein 2-like ...   151   7e-35

>ref|NP_001062125.1| Os08g0493900 [Oryza sativa Japonica Group]
            gi|42408788|dbj|BAD10023.1| putative signal transducer
            and activator of transcription interacting protein [Oryza
            sativa Japonica Group] gi|113624094|dbj|BAF24039.1|
            Os08g0493900 [Oryza sativa Japonica Group]
            gi|218201371|gb|EEC83798.1| hypothetical protein
            OsI_29721 [Oryza sativa Indica Group]
            gi|222640783|gb|EEE68915.1| hypothetical protein
            OsJ_27778 [Oryza sativa Japonica Group]
          Length = 849

 Score =  155 bits (393), Expect = 3e-36
 Identities = 79/132 (59%), Positives = 102/132 (77%), Gaps = 7/132 (5%)
 Frame = -2

Query: 546  ATGSRDKTVKIWAVQNRSSVKLLNTLPQFTSSVTALCWYGRNSSSDKGFLAVGMESGLIE 367
            ATGSRDKTVKIW+VQ+ SSVKLL TLPQF  SVTAL W GR+ +S+ G LA+GM++G+IE
Sbjct: 715  ATGSRDKTVKIWSVQDSSSVKLLVTLPQFHDSVTALAWTGRDRASNAGILAIGMDNGMIE 774

Query: 366  VWSLS--RRNINDSAEYQAALS----VRFDPFICHVSTVHRLAWKHTDNEDCRTA-QLVS 208
            +W++S  R + + S    + LS    +RFDP +CHVSTVHRL W+ +D+ D ++A QL S
Sbjct: 775  LWNISGGRASTDSSGSGSSPLSFACMLRFDPLLCHVSTVHRLRWQKSDSSDEKSALQLAS 834

Query: 207  CGADHCVRVFDV 172
            CGADHCVRVF+V
Sbjct: 835  CGADHCVRVFEV 846


>ref|XP_002282940.1| PREDICTED: probable elongator complex protein 2-like [Vitis vinifera]
          Length = 839

 Score =  155 bits (393), Expect = 3e-36
 Identities = 81/132 (61%), Positives = 99/132 (75%), Gaps = 5/132 (3%)
 Frame = -2

Query: 546  ATGSRDKTVKIWAVQNRSSVKLLNTLPQFTSSVTALCWYGRNSSSDKGFLAVGMESGLIE 367
            ATGSRDKTVKIWAV   SSVK L TLPQFTSSVTAL W+  +   + GFLAVGMESGL+E
Sbjct: 707  ATGSRDKTVKIWAVDKGSSVKQLMTLPQFTSSVTALSWFALDHQRNDGFLAVGMESGLVE 766

Query: 366  VWSLS-RRNINDSAE---YQAALSVRFDPFICHVSTVHRLAWKHTD-NEDCRTAQLVSCG 202
            +WSLS  R ++ S       AAL  R DPF+CHVS+V RLAW+ ++ + DC++  L SCG
Sbjct: 767  LWSLSVTRTVDGSMTVPGVTAALVRRLDPFMCHVSSVQRLAWRKSEASGDCKSVLLASCG 826

Query: 201  ADHCVRVFDVDV 166
            ADHCVR+F+V+V
Sbjct: 827  ADHCVRIFEVNV 838


>ref|XP_004170294.1| PREDICTED: elongator complex protein 2-like [Cucumis sativus]
          Length = 837

 Score =  155 bits (391), Expect = 5e-36
 Identities = 79/130 (60%), Positives = 99/130 (76%), Gaps = 3/130 (2%)
 Frame = -2

Query: 546  ATGSRDKTVKIWAVQNRSSVKLLNTLPQFTSSVTALCWYGRNSSSDKGFLAVGMESGLIE 367
            ATGSRDKTVKIWAV   SSVK L TL QF SSVTAL W G +S S+ GFLA+GME+GL+E
Sbjct: 707  ATGSRDKTVKIWAVTPESSVKQLTTLSQFKSSVTALSWVGLDSKSN-GFLAIGMENGLLE 765

Query: 366  VWSLS-RRNINDSAEYQAALSVRFDPFICHVSTVHRLAWKHTD--NEDCRTAQLVSCGAD 196
            +W+LS +R  N  +   A++++R DPF+CHVS+V+RLAWK  +   E+CR  Q  SCG D
Sbjct: 766  LWNLSIKRTDNIYSNVVASVAIRLDPFVCHVSSVNRLAWKKPEKSGEECRKLQFASCGTD 825

Query: 195  HCVRVFDVDV 166
            HCVRVF+V+V
Sbjct: 826  HCVRVFEVNV 835


>ref|XP_004135387.1| PREDICTED: elongator complex protein 2-like [Cucumis sativus]
          Length = 837

 Score =  155 bits (391), Expect = 5e-36
 Identities = 79/130 (60%), Positives = 99/130 (76%), Gaps = 3/130 (2%)
 Frame = -2

Query: 546  ATGSRDKTVKIWAVQNRSSVKLLNTLPQFTSSVTALCWYGRNSSSDKGFLAVGMESGLIE 367
            ATGSRDKTVKIWAV   SSVK L TL QF SSVTAL W G +S S+ GFLA+GME+GL+E
Sbjct: 707  ATGSRDKTVKIWAVTPESSVKQLTTLSQFKSSVTALSWVGLDSKSN-GFLAIGMENGLLE 765

Query: 366  VWSLS-RRNINDSAEYQAALSVRFDPFICHVSTVHRLAWKHTD--NEDCRTAQLVSCGAD 196
            +W+LS +R  N  +   A++++R DPF+CHVS+V+RLAWK  +   E+CR  Q  SCG D
Sbjct: 766  LWNLSIKRTDNIYSNVVASVAIRLDPFVCHVSSVNRLAWKKPEKSGEECRKLQFASCGTD 825

Query: 195  HCVRVFDVDV 166
            HCVRVF+V+V
Sbjct: 826  HCVRVFEVNV 835


>ref|XP_003574691.1| PREDICTED: elongator complex protein 2-like [Brachypodium distachyon]
          Length = 844

 Score =  151 bits (381), Expect = 7e-35
 Identities = 80/131 (61%), Positives = 99/131 (75%), Gaps = 6/131 (4%)
 Frame = -2

Query: 546  ATGSRDKTVKIWAVQNRSSVKLLNTLPQFTSSVTALCWYGRNSSSDKGFLAVGMESGLIE 367
            ATGSRDKTVKIW VQ+ SSVKLL TLPQF  SVTAL W G + + + G +AVGM++GLIE
Sbjct: 711  ATGSRDKTVKIWRVQDASSVKLLITLPQFCDSVTALAWTGCDRARNAGIIAVGMDNGLIE 770

Query: 366  VWSLS-RRNINDSAEYQAALSV----RFDPFICHVSTVHRLAWKHTDNEDCRTA-QLVSC 205
            +WS+S  R+ +DS+   + LSV    RFDP +CHVSTVHRL W+  D+ D ++A +L SC
Sbjct: 771  LWSISGGRSASDSSSDPSPLSVACILRFDPLLCHVSTVHRLRWQKHDSSDEKSALELASC 830

Query: 204  GADHCVRVFDV 172
            GADHCVRVF V
Sbjct: 831  GADHCVRVFVV 841


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