BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012384
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272768.1| PREDICTED: transcription elongation factor A...    67   6e-09
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-08
ref|XP_002528699.1| transcription elongation factor s-II, putati...    59   1e-06
ref|XP_004160740.1| PREDICTED: transcription elongation factor A...    57   5e-06
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...    57   5e-06

>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = +1

Query: 544 EIVLEENSNIKNNGNSETTASAKVEISKGESVKVEKIQIGDSLKVEKVSRAETIKVEKSN 723
           ++V++E  N K NG  +   SAK E+SK E+VKVE       +KVEK S+ ET+K+EK +
Sbjct: 84  KVVIDETRN-KKNGGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEKASKVETVKIEKFD 142

Query: 724 RTEIIKSEKVSRSETV 771
           R    K   VSRSET+
Sbjct: 143 RGSSTKPGSVSRSETI 158


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 31/74 (41%), Positives = 53/74 (71%)
 Frame = +1

Query: 544 EIVLEENSNIKNNGNSETTASAKVEISKGESVKVEKIQIGDSLKVEKVSRAETIKVEKSN 723
           ++V++E    K NG+ ++ +S K E+SK E+VKVEK++    +KVE+ S +ET+KVEK +
Sbjct: 84  KMVIDETR--KKNGSIDSKSSVKAEVSKSETVKVEKLRKTSVVKVERASTSETVKVEKMD 141

Query: 724 RTEIIKSEKVSRSE 765
           + + +K EK+S+ E
Sbjct: 142 QDKTVKVEKMSKQE 155


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
           gi|223531871|gb|EEF33688.1| transcription elongation
           factor s-II, putative [Ricinus communis]
          Length = 342

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 544 EIVLEENSNIKNNGNSETTASAKVEISKGESVKVEKIQIGDSLKVEKVSRAETIKVEKSN 723
           +IV++E +  K NG  +  +S K E+SK E++KVEK+Q   ++KVEK+ R  T+KVEK +
Sbjct: 84  KIVIDETTR-KKNGTVDNKSSVKAEVSKVETIKVEKVQKASTVKVEKIDRERTVKVEKKS 142

Query: 724 --RTEIIKSEKVSRSETVNGPYPFLSICNVSL 813
             + + I  +K S++         +  CN +L
Sbjct: 143 EEKQQAIDVKKPSQASVTPPKLTAIVKCNDAL 174


>ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
           [Cucumis sativus]
          Length = 290

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +1

Query: 544 EIVLEENSNIKNNGNSETTASAKVEISKGESVKVEKIQIGDSLKVEKVSRAETIKVEKSN 723
           EIV++E +  K NGN+ +  S K+     ESVKVEK Q   S+KVE+VS     KVE+ +
Sbjct: 4   EIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVS-----KVEQFD 58

Query: 724 RTEIIKSEKVSRSETV 771
           R     S K S+SE+V
Sbjct: 59  RNGATSSVKYSKSESV 74


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
           [Cucumis sativus]
          Length = 369

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +1

Query: 544 EIVLEENSNIKNNGNSETTASAKVEISKGESVKVEKIQIGDSLKVEKVSRAETIKVEKSN 723
           EIV++E +  K NGN+ +  S K+     ESVKVEK Q   S+KVE+VS     KVE+ +
Sbjct: 83  EIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVS-----KVEQFD 137

Query: 724 RTEIIKSEKVSRSETV 771
           R     S K S+SE+V
Sbjct: 138 RNGATSSVKYSKSESV 153