BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012383
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33393.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi...   107   4e-21
ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|2...    97   4e-18
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ...    97   5e-18
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17

>emb|CBI33393.3| unnamed protein product [Vitis vinifera]
          Length = 752

 Score =  107 bits (268), Expect = 2e-21
 Identities = 54/86 (62%), Positives = 62/86 (72%)
 Frame = -1

Query: 767 FEPHKTSNYVLLSNIHAEAGEWHEVERVRILMKEKGGVKQSGLSWIELDNQVYSFLSDNL 588
           FEPHKTSNYVLLSN+ AEAG W EV RVR LMKEKG  KQ G SWIEL N+V++FLS++ 
Sbjct: 414 FEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDP 473

Query: 587 TQLRTTEVSEALKYLTGHMRNKIYMP 510
              R  E+   L+ LT HMRN   MP
Sbjct: 474 AHPRAVELCHILRSLTAHMRNTGDMP 499


>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  107 bits (266), Expect = 4e-21
 Identities = 53/86 (61%), Positives = 61/86 (70%)
 Frame = -1

Query: 767 FEPHKTSNYVLLSNIHAEAGEWHEVERVRILMKEKGGVKQSGLSWIELDNQVYSFLSDNL 588
           FEPHKTSNYVLLSN+ AEAG W EV RVR LMKEKG  KQ G SWIEL N+V++FLS++ 
Sbjct: 652 FEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDP 711

Query: 587 TQLRTTEVSEALKYLTGHMRNKIYMP 510
              R  E+   L+ LT HMRN    P
Sbjct: 712 AHPRAVELCHILRSLTAHMRNTAKCP 737


>ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|222867186|gb|EEF04317.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 46/88 (52%), Positives = 62/88 (70%)
 Frame = -1

Query: 767 FEPHKTSNYVLLSNIHAEAGEWHEVERVRILMKEKGGVKQSGLSWIELDNQVYSFLSDNL 588
           FEPHKTSNYVLLSNIHAEA  W+EV+ VR+LM     VK+ G SW+E+ NQV+ FLSD+ 
Sbjct: 614 FEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDDS 673

Query: 587 TQLRTTEVSEALKYLTGHMRNKIYMPDL 504
           T+ R  ++   L  L  H+RN  ++ ++
Sbjct: 674 TRSR-PDIGVTLASLNSHIRNAFHISEV 700


>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513593|gb|AES95216.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 907

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 43/88 (48%), Positives = 62/88 (70%)
 Frame = -1

Query: 764 EPHKTSNYVLLSNIHAEAGEWHEVERVRILMKEKGGVKQSGLSWIELDNQVYSFLSDNLT 585
           EPH  SNY+ LSN+HAEAG W +VER+R+LM+E+   K  G SWIE+ NQ+ +F+SD+  
Sbjct: 655 EPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPG 714

Query: 584 QLRTTEVSEALKYLTGHMRNKIYMPDLQ 501
           +LRT  +   L  L+ HMR+K  + D++
Sbjct: 715 KLRTESIKIILNTLSAHMRDKCNISDMK 742


>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 45/88 (51%), Positives = 57/88 (64%)
 Frame = -1

Query: 764 EPHKTSNYVLLSNIHAEAGEWHEVERVRILMKEKGGVKQSGLSWIELDNQVYSFLSDNLT 585
           EPH  SNY+ LSN+HAEAG W EVERVR+LM+ K   KQ G SWIE+ NQ+  FLS +  
Sbjct: 655 EPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPA 714

Query: 584 QLRTTEVSEALKYLTGHMRNKIYMPDLQ 501
           +LR   +   L  L  HMR+K    D++
Sbjct: 715 KLRPKNIQIILNTLAAHMRDKCNTSDMK 742