BLASTX nr result

ID: Coptis21_contig00012379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012379
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan pr...   198   1e-48
emb|CAN60933.1| hypothetical protein VITISV_022591 [Vitis vinifera]   196   9e-48
emb|CAI99883.1| putative cell surface adhesion protein [Zinnia v...   193   6e-47
ref|XP_002519547.1| conserved hypothetical protein [Ricinus comm...   190   5e-46
ref|XP_002323464.1| predicted protein [Populus trichocarpa] gi|1...   184   3e-44

>ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Vitis
           vinifera]
          Length = 244

 Score =  198 bits (504), Expect = 1e-48
 Identities = 97/139 (69%), Positives = 114/139 (82%)
 Frame = +2

Query: 179 KILEKAGQYDDLIRLLKSTQVGDQIDTQLNNSKQGMTLFAPTDNAFSSLKSGTLNSLTDQ 358
           +ILEKAGQY  LIRL+K TQV DQI+TQLNNS QG+T+FAPTDNAFS+LK+GTLNSLTDQ
Sbjct: 39  QILEKAGQYTILIRLMKGTQVADQINTQLNNSNQGLTVFAPTDNAFSTLKAGTLNSLTDQ 98

Query: 359 DKVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANNGQFPLNVTTTGNQXXXXXXXXXXX 538
            KV+L+QFHV+P F+S +QFQTVSNPLRTQAGN+NNG+FPLNVTT+GNQ           
Sbjct: 99  QKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQVNVSTGIVDAT 158

Query: 539 XXXXIYTDGNLAIYQVDKV 595
               +YTD  LA+YQVDKV
Sbjct: 159 VANTVYTDNQLAVYQVDKV 177


>emb|CAN60933.1| hypothetical protein VITISV_022591 [Vitis vinifera]
          Length = 214

 Score =  196 bits (497), Expect = 9e-48
 Identities = 96/139 (69%), Positives = 113/139 (81%)
 Frame = +2

Query: 179 KILEKAGQYDDLIRLLKSTQVGDQIDTQLNNSKQGMTLFAPTDNAFSSLKSGTLNSLTDQ 358
           +ILEKAGQY  LIRL+K TQV DQI+TQL NS QG+T+FAPTDNAFS+LK+GTLNSLTDQ
Sbjct: 23  QILEKAGQYTILIRLMKGTQVADQINTQLXNSNQGLTVFAPTDNAFSTLKAGTLNSLTDQ 82

Query: 359 DKVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANNGQFPLNVTTTGNQXXXXXXXXXXX 538
            KV+L+QFHV+P F+S +QFQTVSNPLRTQAGN+NNG+FPLNVTT+GNQ           
Sbjct: 83  QKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQVNVSTGIVDAT 142

Query: 539 XXXXIYTDGNLAIYQVDKV 595
               +YTD  LA+YQVDKV
Sbjct: 143 VANTVYTDNQLAVYQVDKV 161


>emb|CAI99883.1| putative cell surface adhesion protein [Zinnia violacea]
          Length = 252

 Score =  193 bits (490), Expect = 6e-47
 Identities = 96/139 (69%), Positives = 112/139 (80%)
 Frame = +2

Query: 179 KILEKAGQYDDLIRLLKSTQVGDQIDTQLNNSKQGMTLFAPTDNAFSSLKSGTLNSLTDQ 358
           KILEKAGQ+  LIRL+K+TQ+GDQI+TQLNNS QGMT+FAPTDNAFSSLK GTLNSL+DQ
Sbjct: 46  KILEKAGQFTTLIRLMKATQLGDQINTQLNNSNQGMTVFAPTDNAFSSLKPGTLNSLSDQ 105

Query: 359 DKVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANNGQFPLNVTTTGNQXXXXXXXXXXX 538
           DKV LLQFHV+PT+++T+Q QTVSNPLRTQAG+  + +FPLNVT  GNQ           
Sbjct: 106 DKVSLLQFHVVPTYLTTSQLQTVSNPLRTQAGDTASNKFPLNVTAAGNQVNVSTGVVDTP 165

Query: 539 XXXXIYTDGNLAIYQVDKV 595
               IYTDG LA+YQVDKV
Sbjct: 166 VSNSIYTDGTLAVYQVDKV 184


>ref|XP_002519547.1| conserved hypothetical protein [Ricinus communis]
           gi|223541410|gb|EEF42961.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score =  190 bits (482), Expect = 5e-46
 Identities = 92/138 (66%), Positives = 112/138 (81%)
 Frame = +2

Query: 182 ILEKAGQYDDLIRLLKSTQVGDQIDTQLNNSKQGMTLFAPTDNAFSSLKSGTLNSLTDQD 361
           ILEKAGQ+   I+L+ STQ   QI+TQLNNS QG+T+FAP DNAF++LK+GTLNSLTDQ+
Sbjct: 41  ILEKAGQFTTFIKLMMSTQEASQINTQLNNSNQGLTVFAPPDNAFANLKAGTLNSLTDQE 100

Query: 362 KVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANNGQFPLNVTTTGNQXXXXXXXXXXXX 541
           KV+L+QFH+LPTF+S +QFQTVSNPLRTQAGN+ NG+FPLNVTT+GNQ            
Sbjct: 101 KVQLMQFHILPTFISMSQFQTVSNPLRTQAGNSANGEFPLNVTTSGNQVNVTTGVDTATV 160

Query: 542 XXXIYTDGNLAIYQVDKV 595
              IYTDG+LA+YQVDKV
Sbjct: 161 ANTIYTDGSLAVYQVDKV 178


>ref|XP_002323464.1| predicted protein [Populus trichocarpa] gi|118481435|gb|ABK92660.1|
           unknown [Populus trichocarpa]
           gi|222868094|gb|EEF05225.1| predicted protein [Populus
           trichocarpa]
          Length = 239

 Score =  184 bits (467), Expect = 3e-44
 Identities = 90/138 (65%), Positives = 110/138 (79%)
 Frame = +2

Query: 182 ILEKAGQYDDLIRLLKSTQVGDQIDTQLNNSKQGMTLFAPTDNAFSSLKSGTLNSLTDQD 361
           IL KAGQ+  LIRLLKSTQ  DQI+TQLNNS QG+T+FAPTDN+F++LK+GTLNSL+DQ 
Sbjct: 40  ILAKAGQFTTLIRLLKSTQEADQINTQLNNSNQGLTVFAPTDNSFANLKAGTLNSLSDQQ 99

Query: 362 KVELLQFHVLPTFVSTAQFQTVSNPLRTQAGNANNGQFPLNVTTTGNQXXXXXXXXXXXX 541
           KV+L+QFH+LP F+S + FQTVSNPLRTQAGN+ +G+FPLNVTT+GNQ            
Sbjct: 100 KVQLVQFHILPNFLSMSNFQTVSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVNTATV 159

Query: 542 XXXIYTDGNLAIYQVDKV 595
              IYTDG L +YQVD+V
Sbjct: 160 ANTIYTDGQLVVYQVDQV 177


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