BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012378
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    78   4e-23
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-21
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    72   1e-20
ref|NP_193959.2| F-box protein [Arabidopsis thaliana] gi|3326591...    80   2e-19
ref|XP_002875646.1| hypothetical protein ARALYDRAFT_905516 [Arab...    76   2e-19

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 77.8 bits (190), Expect(2) = 4e-23
 Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
 Frame = +2

Query: 257 FQNFVSRTLLRQDGSDIVKFNLSVSVDEKVVNKRHIKAWIYFVIKHNVREL----YIGIA 424
           F N V R LL +D S+I KF LS  +D+        + W+   +  NV+EL    Y G  
Sbjct: 94  FMNSVERVLLLRDSSNIEKFTLSCGIDDAT----RTRTWVSAAVNRNVKELCVNFYEGGE 149

Query: 425 SGKFASFPRDFFTCSTLRVLSL-RHVHLKLPTVVCFPQLKCLTLDFVTFYDDCSTENFFS 601
           S  F S P   FTC+TL  L +  H  L+L + +  P LK L+L  V F D+ ST+   +
Sbjct: 150 SESFVS-PLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQILN 208

Query: 602 TSCPVLEALTIDYCRLYNFNTLTISCLRLKALNI 703
                LE L I Y    N   +TIS  +L++L+I
Sbjct: 209 LR--TLEKLKISYYDWKNLKAITISAPKLRSLDI 240



 Score = 57.0 bits (136), Expect(2) = 4e-23
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = +1

Query: 118 ISHLPEPILSHILSFLPTQEAVQTSILSREWRYIYYSLSNLWFVIGVSEFRQSY 279
           I+ LP+ +L HILSFL T++AV+TSILSR+W +++ SLSNL       EF Q Y
Sbjct: 40  INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNL-------EFHQCY 86


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 71.2 bits (173), Expect(2) = 3e-21
 Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
 Frame = +2

Query: 257 FQNFVSRTLLRQDGSDIVKFNLSVSVDEKVVNKRHIKAWIYFVIKHNVRELYIGIASGKF 436
           F +FV R L  +  S+IV+F LS  V +   +   +  WI   +  NV++LY+ +   + 
Sbjct: 81  FMDFVDRVLALRGPSNIVQFYLSCEVKD---DPSRVGTWISAAVNRNVKDLYLELRDFE- 136

Query: 437 ASF--PRDFFTCSTLRVLSLRHVH-LKLPTVVCFPQLKCLTLDFVTFYDDCSTENFFSTS 607
           ASF  P   F C TL  L +   + LKLP+ +    LK L L  V F DD ST+  F  S
Sbjct: 137 ASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQLF--S 194

Query: 608 CPVLEALTIDYCRLYNFNTLTISCLRLKALNI 703
            P L  L I  C   N   ++IS  +L++L+I
Sbjct: 195 LPNLVELEIHECNWMNLVAVSISAPKLQSLDI 226



 Score = 57.4 bits (137), Expect(2) = 3e-21
 Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
 Frame = +1

Query: 70  KSMKKLCSSSRETMSG---ISHLPEPILSHILSFLPTQEAVQTSILSREWRYIYYSLSNL 240
           K+ +K   + +ET SG   I +LP+ +L HILSFL T+ AV+TSILS++W +++ S +NL
Sbjct: 9   KTKRKKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNL 68

Query: 241 WF 246
            F
Sbjct: 69  TF 70


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 71.6 bits (174), Expect(2) = 1e-20
 Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
 Frame = +2

Query: 248 LLEFQNFVSRTLLRQDGSDIVKFNLSVSVDEKVVNKRHIKAWIYFVIKHNVRELYIGIAS 427
           ++ FQNFV   L   + S I KF L    +    N   + +WI   ++  V+EL + +  
Sbjct: 72  IIMFQNFVDGVLRHSEVSCIKKFRLGYRDN----NLDSVYSWICIALERRVQELDLHLLI 127

Query: 428 GKFASFPRDFFTCSTLRVLSLR-HVHLKLPTVVCFPQLKCLTLDFVTFYDDCSTENFFST 604
                 P  FF C TL V+ L   + L +PT V  P LK L L  V + DD S +   S 
Sbjct: 128 DWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLS- 186

Query: 605 SCPVLEALTIDYCRLYNFNTLTISCLRLKALNI---TNRISH----------IDICCPNL 745
            CPVLE L I+     N   + +S   LK L I   T+  +H          + +  PNL
Sbjct: 187 GCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNL 246

Query: 746 QYVRYHGVKPPNISTQTLSSLFAAKFEFRQPS 841
           +Y+        +   + L SL  A  +  Q S
Sbjct: 247 EYLSITDYLSKDYFVKDLPSLVKAFIDVEQDS 278



 Score = 54.7 bits (130), Expect(2) = 1e-20
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +1

Query: 91  SSSRETMSGISHLPEPILSHILSFLPTQEAVQTSILSREWRYIYYSLSNLWF 246
           S   E+   IS+LP+ +L HILSFLPT+ AV TSILS+ WRY++ S+  L F
Sbjct: 3   SEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDF 54


>ref|NP_193959.2| F-box protein [Arabidopsis thaliana] gi|332659185|gb|AEE84585.1|
           F-box protein [Arabidopsis thaliana]
          Length = 415

 Score = 80.5 bits (197), Expect(2) = 2e-19
 Identities = 73/229 (31%), Positives = 104/229 (45%), Gaps = 16/229 (6%)
 Frame = +2

Query: 257 FQNFVSRTLLRQDGSDIVKFNLSVSVDEKVVNKRHIKAWIYFVIKHNVRELYIGIASGKF 436
           F +FV R L+      I + ++   +    ++  H+  W+  V++H V  L I I S   
Sbjct: 57  FIDFVDRVLVVTGNFPIRRISIKCRMS---IDTGHVTRWMVDVLEHGVSYLDIDIISEDD 113

Query: 437 ASF-PRDFFTCSTLRVLSL-RHVHLKLPTVVCFPQLKCLTLDFVTFYD-DCSTENFFSTS 607
             F P + FTC TL  L L R  +  +P  V  P LK L L  + F + DC       ++
Sbjct: 114 IGFVPLEIFTCKTLVELKLARGFYAMVPDYVSLPSLKTLFLSSIWFCNRDCCPLGRLLSA 173

Query: 608 CPVLEALT--------IDYCRLYNFNTLTISCLRLKALNITNRISH----IDICCPNLQY 751
           CPVLE LT        I++CR       T+S   LK L IT+   +    I I  P+L Y
Sbjct: 174 CPVLEELTIIGGCWQHIEFCR-------TVSSSTLKKLTITSSFHYEYWGITIDTPSLAY 226

Query: 752 VRYHGVKPPNISTQTLSSLFAAKFEFRQPSNILQT-IITGLQNVVTLSL 895
           + Y  + P +     L SL  AK      S+   T +I GL+NV  L L
Sbjct: 227 LEYSDLVPRHFPFVNLESLVEAKLALDLCSDSNPTNLIKGLRNVEVLEL 275



 Score = 41.6 bits (96), Expect(2) = 2e-19
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +1

Query: 109 MSGISHLPEPILSHILSFLPTQEAVQTSILSREWRYIYYSLSNL 240
           M  I+ L + I+ HILS L  +EA  TS+LS  WRY++    NL
Sbjct: 1   MDRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNL 44


>ref|XP_002875646.1| hypothetical protein ARALYDRAFT_905516 [Arabidopsis lyrata subsp.
           lyrata] gi|297321484|gb|EFH51905.1| hypothetical protein
           ARALYDRAFT_905516 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 75.9 bits (185), Expect(2) = 2e-19
 Identities = 75/242 (30%), Positives = 109/242 (45%), Gaps = 23/242 (9%)
 Frame = +2

Query: 257 FQNFVSRTLLRQDGSDIVKFNLSVSVDEKVVNKRHIKAWIYFVIKHNVRELYIGIASGKF 436
           F +FV  TL     + I KF+L +S D  + N   +  WI   ++  V +L++GI S  F
Sbjct: 74  FNDFVDHTLALHGNNTIKKFSLELS-DTHIDNLHDVDRWICNALERGVSDLHLGIESELF 132

Query: 437 --ASFPRDFFTCSTLRVLSL----RHVHLKLPTVVCFPQLKCLTLD-FVTFYDDCSTENF 595
             + FP   FT +TL  LSL    R     +P+ +  P LK L LD  + F  D    N 
Sbjct: 133 LWSGFPSKVFTSTTLVKLSLGVGTRFYTESVPSDLSLPALKVLFLDSIIWFKGDLQLLNV 192

Query: 596 FSTSCPVLEALTIDYCRLYNFNTLTISCLRLKALNIT-----------NRISHIDICCPN 742
           F  +CP LE LTI Y    + N   IS   +K L+ T           +RI   D   PN
Sbjct: 193 FLAACPALEDLTIHY-MCGSENPHVISSKTIKKLSFTYGYIYDYYGYFSRIISFD--TPN 249

Query: 743 L---QYVRYHGVKPPNISTQTLSSLFAAKFEFRQPSNI--LQTIITGLQNVVTLSLCCSC 907
           +    Y  Y G + P     +++        F +   I  +  +I+G++NV TL L  S 
Sbjct: 250 VVDFYYSDYFGSESPQRHFDSIAKA-TLDLHFLKGDKIADVTDLISGIRNVKTLHLNSST 308

Query: 908 IE 913
           +E
Sbjct: 309 VE 310



 Score = 46.2 bits (108), Expect(2) = 2e-19
 Identities = 22/47 (46%), Positives = 31/47 (65%)
 Frame = +1

Query: 106 TMSGISHLPEPILSHILSFLPTQEAVQTSILSREWRYIYYSLSNLWF 246
           TM  ++ LP+ +L HILSFL T+EA  T +LS+ WR ++    NL F
Sbjct: 5   TMCSMNCLPDDLLVHILSFLTTKEAASTFVLSKRWRTLFALSHNLDF 51