BLASTX nr result

ID: Coptis21_contig00012366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012366
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525489.1| PREDICTED: pollen-specific protein SF3-like ...   137   1e-30
ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin...   135   4e-30
ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_003550749.1| PREDICTED: pollen-specific protein SF3-like ...   132   4e-29
ref|XP_002318024.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_003525489.1| PREDICTED: pollen-specific protein SF3-like [Glycine max]
          Length = 215

 Score =  137 bits (346), Expect = 1e-30
 Identities = 60/80 (75%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   VACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKG 182
           V CKKTVYPIEKV VD  SYH+ CFRC HGGC+ISPSNYIAHE +LYC+HHHTQLFK KG
Sbjct: 110 VGCKKTVYPIEKVAVDGKSYHKSCFRCTHGGCVISPSNYIAHEHRLYCRHHHTQLFKQKG 169

Query: 183 NFSQFDKHVNINVLPE-TVT 239
           NFSQ DKH N+ V+ E T+T
Sbjct: 170 NFSQLDKHENVQVITEITIT 189



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +3

Query: 6   ACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGN 185
           AC+K VY +E++T D   YH+ CFRC H    +  SNY + E  LYCK H  QLFK+ G+
Sbjct: 13  ACEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPHFHQLFKMTGS 72

Query: 186 FSQ 194
             +
Sbjct: 73  LDK 75


>ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 190

 Score =  135 bits (341), Expect = 4e-30
 Identities = 57/77 (74%), Positives = 65/77 (84%)
 Frame = +3

Query: 3   VACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKG 182
           VACKKTVYPIEKV VD  SYH+ CFRC HGGC+ISPSNY+AHEQ+LYC+HHH QLFK KG
Sbjct: 111 VACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEQRLYCRHHHNQLFKQKG 170

Query: 183 NFSQFDKHVNINVLPET 233
           NFSQ DKH ++  + ET
Sbjct: 171 NFSQLDKHEHVKPVTET 187



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = +3

Query: 6   ACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGN 185
           AC+KTVY ++++T D   YH+ CFRC H    +  SNY + E  LYCK H  QLFK+ G+
Sbjct: 13  ACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFKMTGS 72

Query: 186 FSQ 194
             +
Sbjct: 73  LDK 75


>ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|222868567|gb|EEF05698.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  134 bits (336), Expect = 2e-29
 Identities = 56/79 (70%), Positives = 65/79 (82%)
 Frame = +3

Query: 3   VACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKG 182
           VAC KTVYP+EKV VD  SYH+ CFRCAHGGC+ISPSNY+AHE +LYC+HHH QLFK KG
Sbjct: 111 VACNKTVYPLEKVAVDGTSYHKACFRCAHGGCVISPSNYVAHEHRLYCRHHHNQLFKEKG 170

Query: 183 NFSQFDKHVNINVLPETVT 239
           NFSQF KH ++  + ET T
Sbjct: 171 NFSQFGKHEHLTPVDETAT 189



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = +3

Query: 6   ACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGN 185
           AC KTVY ++++TVD   YH+ CFRC H    +  SNY + E  LYC+ H  QLFK+ G+
Sbjct: 13  ACDKTVYLVDQLTVDNKFYHKACFRCHHCKGTLKLSNYSSFEGVLYCQPHFDQLFKMTGS 72

Query: 186 FSQ 194
             +
Sbjct: 73  LDK 75


>ref|XP_003550749.1| PREDICTED: pollen-specific protein SF3-like [Glycine max]
          Length = 209

 Score =  132 bits (333), Expect = 4e-29
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = +3

Query: 3   VACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKG 182
           V CKKTVYPIEKV VD  SYH+ CFRC HGGC+ISPSNY+AHE +LYC+HHHTQLFK KG
Sbjct: 111 VGCKKTVYPIEKVAVDGKSYHKSCFRCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKG 170

Query: 183 NFSQFDKHVNINVL 224
           NFSQ DKH ++ V+
Sbjct: 171 NFSQLDKHDSVQVV 184



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +3

Query: 6   ACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGN 185
           AC+K VY +E++T D   YH+ CFRC H    +  SNY + E  LYCK H  QLFK+ G+
Sbjct: 13  ACEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGS 72

Query: 186 FSQ 194
             +
Sbjct: 73  LDK 75


>ref|XP_002318024.1| predicted protein [Populus trichocarpa] gi|222858697|gb|EEE96244.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  132 bits (333), Expect = 4e-29
 Identities = 55/77 (71%), Positives = 65/77 (84%)
 Frame = +3

Query: 3   VACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKG 182
           VACKKTVYPIE+V VD  SYH+ CFRCAHGGC+ISPSN++AHE +LYC+HHH QLFK KG
Sbjct: 111 VACKKTVYPIERVAVDGTSYHKACFRCAHGGCVISPSNFVAHEHRLYCRHHHNQLFKQKG 170

Query: 183 NFSQFDKHVNINVLPET 233
           NFSQ DKH ++  + ET
Sbjct: 171 NFSQLDKHEHVTPVKET 187



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +3

Query: 6   ACKKTVYPIEKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGN 185
           +C+KTVY ++++T D   YH+ CFRC H    +  SNY + E  LYCK H  QL K+ G+
Sbjct: 13  SCEKTVYFVDQLTADDKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLLKMTGS 72

Query: 186 FSQ 194
             +
Sbjct: 73  LDK 75