BLASTX nr result

ID: Coptis21_contig00012353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012353
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-li...    79   5e-13
ref|XP_003609656.1| WD repeat-containing protein [Medicago trunc...    76   3e-12
ref|XP_002307312.1| hypothetical protein POPTRDRAFT_760587 [Popu...    75   7e-12
ref|XP_002310317.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-li...    73   2e-11

>ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-like [Vitis vinifera]
           gi|297735857|emb|CBI18611.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/38 (92%), Positives = 38/38 (100%)
 Frame = -2

Query: 398 EGHTDTVISVACHPSENMIASGALGNDKTVKIWTQERD 285
           EGHTDTVISV+CHPS+NMIASGALG+DKTVKIWTQERD
Sbjct: 276 EGHTDTVISVSCHPSQNMIASGALGSDKTVKIWTQERD 313


>ref|XP_003609656.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510711|gb|AES91853.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 326

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 32/38 (84%), Positives = 38/38 (100%)
 Frame = -2

Query: 398 EGHTDTVISVACHPSENMIASGALGNDKTVKIWTQERD 285
           EGHTD+V+SV+CHP+ENMIASGALGNDKTVKIWTQ++D
Sbjct: 289 EGHTDSVVSVSCHPTENMIASGALGNDKTVKIWTQQKD 326


>ref|XP_002307312.1| hypothetical protein POPTRDRAFT_760587 [Populus trichocarpa]
           gi|222856761|gb|EEE94308.1| hypothetical protein
           POPTRDRAFT_760587 [Populus trichocarpa]
          Length = 317

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/36 (91%), Positives = 36/36 (100%)
 Frame = -2

Query: 398 EGHTDTVISVACHPSENMIASGALGNDKTVKIWTQE 291
           EGHTDTVISVACHP++N+IASGALGNDKTVKIWTQE
Sbjct: 281 EGHTDTVISVACHPTQNIIASGALGNDKTVKIWTQE 316


>ref|XP_002310317.1| predicted protein [Populus trichocarpa] gi|222853220|gb|EEE90767.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/37 (86%), Positives = 37/37 (100%)
 Frame = -2

Query: 398 EGHTDTVISVACHPSENMIASGALGNDKTVKIWTQER 288
           EGHTDTVISVACHP++NMIASGA+G+DKTVKIWTQE+
Sbjct: 281 EGHTDTVISVACHPTQNMIASGAIGSDKTVKIWTQEK 317


>ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
           gi|449531922|ref|XP_004172934.1| PREDICTED: WD
           repeat-containing protein 5-like [Cucumis sativus]
          Length = 318

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = -2

Query: 398 EGHTDTVISVACHPSENMIASGALGNDKTVKIWTQE 291
           EGH+DTVISV+CHPSENMIASGA+GNDKTVKIWTQ+
Sbjct: 279 EGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK 314


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