BLASTX nr result

ID: Coptis21_contig00012348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012348
         (1333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264963.1| PREDICTED: auxin-induced protein AUX28 [Viti...   303   9e-80
ref|XP_002284133.1| PREDICTED: auxin-responsive protein IAA14-li...   293   7e-77
ref|XP_002328494.1| predicted protein [Populus trichocarpa] gi|1...   291   3e-76
gb|AAM21317.1|AF373100_1 auxin-regulated protein [Populus tremul...   290   4e-76
gb|ABH01143.1| auxin-regulated protein [Populus tomentosa]            290   8e-76

>ref|XP_002264963.1| PREDICTED: auxin-induced protein AUX28 [Vitis vinifera]
            gi|313765827|gb|ADR80321.1| indole-3-acetic acid-induced
            protein 16 [Vitis vinifera]
          Length = 238

 Score =  303 bits (775), Expect = 9e-80
 Identities = 162/243 (66%), Positives = 184/243 (75%), Gaps = 3/243 (1%)
 Frame = -1

Query: 1126 MTNMLGTERDQYTMNFEETXXXXXXXXXXXXXXXXXXXXXXG---FAETIDLKLKLPAKD 956
            M +++  ERD++ +N+EET                      G   F+ET+DLKL L +KD
Sbjct: 1    MASIVCAERDKFNLNYEETELRLGLGLPGGGGNDGDVSKTSGKRGFSETVDLKLNLLSKD 60

Query: 955  LEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSSNTKEDT 776
               D +EK K    EK               AQVVGWPPVRSFRKNIL+VQK+S+ +E+ 
Sbjct: 61   SVADQAEKMK----EKSALPPSNDPAKPPAKAQVVGWPPVRSFRKNILTVQKNSS-EEEK 115

Query: 775  GMSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNES 596
              SSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCG+QGMKDFMNES
Sbjct: 116  ASSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNES 175

Query: 595  KLMDLLSGTEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCK 416
            KL+DLL+G++YVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEAIGLAPRAVEKCK
Sbjct: 176  KLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCK 235

Query: 415  NRS 407
            NRS
Sbjct: 236  NRS 238


>ref|XP_002284133.1| PREDICTED: auxin-responsive protein IAA14-like isoform 1 [Vitis
            vinifera]
          Length = 243

 Score =  293 bits (750), Expect = 7e-77
 Identities = 159/246 (64%), Positives = 179/246 (72%), Gaps = 1/246 (0%)
 Frame = -1

Query: 1144 MEVCRNMTNMLGTERDQYTMNFEETXXXXXXXXXXXXXXXXXXXXXXG-FAETIDLKLKL 968
            MEV R M++MLG ER     +F+ET                        F+ET+DLKL L
Sbjct: 1    MEVGRKMSSMLGAERG---FDFKETELCLGLPGGGGGEAETLKASGKRGFSETVDLKLNL 57

Query: 967  PAKDLEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSSNT 788
             +K+  +D +E  K  PKEK               AQVVGWPPVRSFRKNI++ QK+S+ 
Sbjct: 58   QSKESVVDLNENVKCPPKEKNLLPCTKDPAKPPAKAQVVGWPPVRSFRKNIMA-QKNSSE 116

Query: 787  KEDTGMSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDF 608
            + + G S AAFVKV MDGAPYLRKVDLKMYKSYQELSDALGKMFSSFT+GN G QGM DF
Sbjct: 117  EGEKGSSGAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTMGNYGAQGMIDF 176

Query: 607  MNESKLMDLLSGTEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAV 428
            MNESKLMDLL+ +EYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRA+
Sbjct: 177  MNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAM 236

Query: 427  EKCKNR 410
            EKCKNR
Sbjct: 237  EKCKNR 242


>ref|XP_002328494.1| predicted protein [Populus trichocarpa] gi|118484744|gb|ABK94241.1|
            unknown [Populus trichocarpa] gi|222838209|gb|EEE76574.1|
            predicted protein [Populus trichocarpa]
          Length = 250

 Score =  291 bits (745), Expect = 3e-76
 Identities = 158/250 (63%), Positives = 182/250 (72%), Gaps = 10/250 (4%)
 Frame = -1

Query: 1126 MTNMLGTER-DQYTM-NFEETXXXXXXXXXXXXXXXXXXXXXXG---FAETIDLKLKLPA 962
            MT+++G E  D Y+M N+EET                      G   F+ET+DLKL L  
Sbjct: 1    MTSIMGAETADTYSMINYEETELRLGLPGGASNGNDGEAAKGNGKRGFSETVDLKLNLST 60

Query: 961  KDLEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSSNTKE 782
            K+   D S++ K + KEK               AQVVGWPP+RSFRKN+++VQK+SN + 
Sbjct: 61   KETGKDGSDQEKVVMKEKTVAPRPNDPAKPPSKAQVVGWPPIRSFRKNVMAVQKNSNDEG 120

Query: 781  DTGMSS-----AAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGM 617
            +   SS     AAFVKVSMDGAPYLRKVDLK+YKSY+ELSDALGKMFSSFTIGNCG+QG 
Sbjct: 121  EKASSSGTTGTAAFVKVSMDGAPYLRKVDLKLYKSYRELSDALGKMFSSFTIGNCGSQGT 180

Query: 616  KDFMNESKLMDLLSGTEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAP 437
            KDFMNESKL+DLL+ +EYVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMKGSEAIGLAP
Sbjct: 181  KDFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCKRLRIMKGSEAIGLAP 240

Query: 436  RAVEKCKNRS 407
            RAVEKCKNRS
Sbjct: 241  RAVEKCKNRS 250


>gb|AAM21317.1|AF373100_1 auxin-regulated protein [Populus tremula x Populus tremuloides]
          Length = 249

 Score =  290 bits (743), Expect = 4e-76
 Identities = 157/249 (63%), Positives = 182/249 (73%), Gaps = 9/249 (3%)
 Frame = -1

Query: 1126 MTNMLGTE-RDQYTM-NFEETXXXXXXXXXXXXXXXXXXXXXXG---FAETIDLKLKLPA 962
            MT+++G E    Y+M NFEET                      G   F+ET+DLKL L  
Sbjct: 1    MTSIMGAEPAGTYSMMNFEETELRLGLPGGVSNGNDSEAAKSNGKRGFSETVDLKLNLST 60

Query: 961  KDLEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSSNTKE 782
            K+   D S++ K + KEK               AQVVGWPP+RSFRKN+++VQK+SN + 
Sbjct: 61   KETGKDGSDQEKVVMKEKTVAPRPNDPAKPPSKAQVVGWPPIRSFRKNVMAVQKNSNDEG 120

Query: 781  D----TGMSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMK 614
            +    +G + AAFVKVSMDGAPYLRKVDLK+YKSY+ELSDALGKMFSSFTIGNCG+QG K
Sbjct: 121  EKASSSGATGAAFVKVSMDGAPYLRKVDLKLYKSYRELSDALGKMFSSFTIGNCGSQGTK 180

Query: 613  DFMNESKLMDLLSGTEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPR 434
            DFMNESKL+DLL+ +EYVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMKGSEAIGLAPR
Sbjct: 181  DFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCKRLRIMKGSEAIGLAPR 240

Query: 433  AVEKCKNRS 407
            AVEKCKNRS
Sbjct: 241  AVEKCKNRS 249


>gb|ABH01143.1| auxin-regulated protein [Populus tomentosa]
          Length = 258

 Score =  290 bits (741), Expect = 8e-76
 Identities = 145/202 (71%), Positives = 165/202 (81%), Gaps = 4/202 (1%)
 Frame = -1

Query: 1000 FAETIDLKLKLPAKDLEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRK 821
            F+ET+DLKL L  KD   D S++ K   KEK               AQVVGWPP+RSFRK
Sbjct: 50   FSETVDLKLNLSTKDTGKDGSDQEKAAMKEKAVAPRPNDPAKPPSKAQVVGWPPIRSFRK 109

Query: 820  NILSVQKSSNTKED----TGMSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFS 653
            N+++VQK+SN + +    +G + AAFVKVSMDGAPYLRKVDLK+YKSY+ELSDALGKMFS
Sbjct: 110  NVMAVQKNSNDEGEKASSSGATGAAFVKVSMDGAPYLRKVDLKLYKSYRELSDALGKMFS 169

Query: 652  SFTIGNCGTQGMKDFMNESKLMDLLSGTEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLR 473
            SFTIGNCG+QG K+FMNESKL+DLL+ +EYVPTYEDKDGDWMLVGDVPW MFVDSCKRLR
Sbjct: 170  SFTIGNCGSQGTKEFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCKRLR 229

Query: 472  IMKGSEAIGLAPRAVEKCKNRS 407
            IMKGSEAIGLAPRAVEKCKNRS
Sbjct: 230  IMKGSEAIGLAPRAVEKCKNRS 251


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