BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012331
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   126   2e-27
ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   125   5e-27
ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like...   105   3e-21
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   103   1e-20

>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/86 (70%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = -1

Query: 255 ERIPLVDITLEVRDARIPISSAYEHMRKFP-SSHRIVVLNKMDLAGRSQTKEWIRHFREQ 79
           ERIPLVD  LEVRDARIP SS YE M+  P SS RI+VLNK DLA +SQT+ W RHF + 
Sbjct: 41  ERIPLVDFVLEVRDARIPTSSEYEMMKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDH 100

Query: 78  NCICYGINAHNKENVKEFLNFLQARV 1
           NCI YG+N+HNKEN++EFLNFLQARV
Sbjct: 101 NCISYGVNSHNKENIREFLNFLQARV 126


>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/86 (67%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
 Frame = -1

Query: 255 ERIPLVDITLEVRDARIPISSAYEHMRKFPSSH-RIVVLNKMDLAGRSQTKEWIRHFREQ 79
           ERIPLVD+ LEVRDARIP+SS Y+ +R FPSS  RI+VLNKMDLA R + KEW+R+F +Q
Sbjct: 35  ERIPLVDLVLEVRDARIPLSSEYDQLRNFPSSSKRIIVLNKMDLANRLEIKEWMRYFEQQ 94

Query: 78  NCICYGINAHNKENVKEFLNFLQARV 1
           NCI +G+N+HNK+N+KE L FLQA+V
Sbjct: 95  NCISFGVNSHNKDNIKECLKFLQAQV 120


>ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|222859331|gb|EEE96878.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
 Frame = -1

Query: 255 ERIPLVDITLEVRDARIPISSAYEHMRKFPSS--HRIVVLNKMDLAGRSQTKEWIRHFRE 82
           +RIPL D  LEVRDARIP+SS  + +  FP S   RI+V+NK DLA RSQ KEW ++F +
Sbjct: 38  QRIPLADFILEVRDARIPLSSHCQLLSNFPPSSLRRIIVMNKTDLANRSQLKEWTKYFEQ 97

Query: 81  QNCICYGINAHNKENVKEFLNFLQARV 1
           QNCI YG+N+HNKE+VK+FLNFLQA+V
Sbjct: 98  QNCISYGVNSHNKEDVKKFLNFLQAQV 124


>ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like [Glycine max]
          Length = 399

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = -1

Query: 255 ERIPLVDITLEVRDARIPISSAYEHMRKFPSS-HRIVVLNKMDLAGRSQTKEWIRHFREQ 79
           ERIPL D+ ++VRDARIP+SS  E +R +P S  +IV LNKMDL G S  K W+ +FRE+
Sbjct: 62  ERIPLADLVVQVRDARIPLSSECEILRNYPPSLKQIVALNKMDLVGTSNVKAWMGYFRER 121

Query: 78  NCICYGINAHNKENVKEFLNFLQARV 1
           NCI  G+NAHNKEN+K+ L+ +Q RV
Sbjct: 122 NCISCGVNAHNKENIKQLLSLIQRRV 147


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = -1

Query: 255 ERIPLVDITLEVRDARIPISSAYEHMRKFP-SSHRIVVLNKMDLAGRSQTKEWIRHFREQ 79
           ERI LVD  +EVRDARIP+SS  + +     SS RI+V+NKMDLA R Q K+WI++F+++
Sbjct: 35  ERISLVDFVIEVRDARIPLSSECQLLTNHSDSSRRIIVMNKMDLANRLQLKDWIKYFKQR 94

Query: 78  NCICYGINAHNKENVKEFLNFLQARV 1
             + Y IN+HNK+NVKEFLNFLQ +V
Sbjct: 95  GFVSYAINSHNKDNVKEFLNFLQGQV 120