BLASTX nr result

ID: Coptis21_contig00012330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012330
         (1670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   292   2e-76
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   286   1e-74
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   285   2e-74
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...   274   6e-71
ref|XP_004168094.1| PREDICTED: uncharacterized LOC101211767 [Cuc...   245   3e-62

>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  292 bits (747), Expect = 2e-76
 Identities = 190/367 (51%), Positives = 214/367 (58%), Gaps = 10/367 (2%)
 Frame = -2

Query: 1402 SEAGIMSGRES-SFGIQKHQPVST--GTPNMRLGFSSDGTAVYKPILTTATTSPTYQQPI 1232
            SE GIMSGRES + G+QK  PV +     +MRL F+ DGTA+YKPI T++   P YQ   
Sbjct: 5    SEPGIMSGRESFNVGMQK-SPVQSQPSMQSMRLAFAPDGTAIYKPITTSSPPPPPYQGGG 63

Query: 1231 TAA---GVENAVATTVIPQGISTSMNIGEQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXX 1061
             A    G +      + P G++  +N+GE +           PDGTM             
Sbjct: 64   GAGSTGGGDGPSPAAITPHGLN--INVGEPVKRKRGRPRKYGPDGTMSLALTTVSPTAAV 121

Query: 1060 XXXXXXPQQNVQPSGGFXXXXXXXXXXXSMKKSRGRPPGSGKKQQIAALGSAGIGFTPHV 881
                        PS              +MKK+RGRPPGSGKKQQ+AALGSAGIGFTPHV
Sbjct: 122  SPGSG----GFSPSSAGAGNPASSASAEAMKKARGRPPGSGKKQQLAALGSAGIGFTPHV 177

Query: 880  ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXX 701
            ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEI    
Sbjct: 178  ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSLS 237

Query: 700  XXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADGRKDLK 521
                     GQRSRTGGLSVS                   ASPVQVVVGSFIADG+K+  
Sbjct: 238  GSFLLSESGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGKKE-- 295

Query: 520  PNH---SEPAAAPAKLXXXXXXXXXXXXXSRGTLSE-XXXXXXXPLNHSTGACNNSNAQG 353
            P H   S+P  AP KL             SRGTLSE        PLN STG CNNSN QG
Sbjct: 296  PKHTAPSDPTLAPGKLAAGGAAAGANSPPSRGTLSESSGGGPGSPLNQSTGTCNNSNQQG 355

Query: 352  MANVPWK 332
            ++N+PWK
Sbjct: 356  LSNMPWK 362


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
            gi|297745600|emb|CBI40765.3| unnamed protein product
            [Vitis vinifera]
          Length = 353

 Score =  286 bits (731), Expect = 1e-74
 Identities = 189/369 (51%), Positives = 212/369 (57%), Gaps = 9/369 (2%)
 Frame = -2

Query: 1411 MSGSEAGIMSGRES-SFGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQ 1238
            MSGSE GIM+ RE  S G+QK+  P      NMRL FS DG AVYKP+   + TSP YQ 
Sbjct: 1    MSGSETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQS 57

Query: 1237 PITAAGVENAVATTVIPQGISTSMNIGEQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXXX 1058
                 G + +    +IP G++ +M   E +           PDGTM              
Sbjct: 58   S-GGTGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV--- 112

Query: 1057 XXXXXPQQNVQPSGGFXXXXXXXXXXXS---MKKSRGRPPGSGKKQQIAALGSAGIGFTP 887
                    NV  SGG            S   +KK+RGRPPGS KKQQ+ ALGSAG+GFTP
Sbjct: 113  --------NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTP 164

Query: 886  HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXX 707
            HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI  
Sbjct: 165  HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILS 224

Query: 706  XXXXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADGRKD 527
                       GQRSRTGGLSVS                   ASPVQVVVGSFIADGRK+
Sbjct: 225  LSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKE 284

Query: 526  LK-PNHSEPAAAPAKL---XXXXXXXXXXXXXSRGTLSEXXXXXXXPLNHSTGACNNSNA 359
             K  +  EP++AP K+                SRGTLSE       PLN STGACNNSN 
Sbjct: 285  SKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNP 344

Query: 358  QGMANVPWK 332
             GM ++PWK
Sbjct: 345  PGMTSIPWK 353


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  285 bits (730), Expect = 2e-74
 Identities = 192/385 (49%), Positives = 215/385 (55%), Gaps = 9/385 (2%)
 Frame = -2

Query: 1411 MSGSEAGIMSGRES-SFGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQ 1238
            MSGSE GIM+ RE  S G+QK+  P      NMRL FS DG AVYKP+   + TSP YQ 
Sbjct: 1    MSGSETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQS 57

Query: 1237 PITAAGVENAVATTVIPQGISTSMNIGEQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXXX 1058
                 G + +    +IP G++ +M   E +           PDGTM              
Sbjct: 58   S-GGTGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV--- 112

Query: 1057 XXXXXPQQNVQPSGGFXXXXXXXXXXXS---MKKSRGRPPGSGKKQQIAALGSAGIGFTP 887
                    NV  SGG            S   +KK+RGRPPGS KKQQ+ ALGSAG+GFTP
Sbjct: 113  --------NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTP 164

Query: 886  HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXX 707
            HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI  
Sbjct: 165  HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILS 224

Query: 706  XXXXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADGRKD 527
                       GQRSRTGGLSVS                   ASPVQVVVGSFIADGRK+
Sbjct: 225  LSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKE 284

Query: 526  LK-PNHSEPAAAPAKL---XXXXXXXXXXXXXSRGTLSEXXXXXXXPLNHSTGACNNSNA 359
             K  +  EP++AP K+                SRGTLSE       PLN STGACNNSN 
Sbjct: 285  SKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNP 344

Query: 358  QGMANVPWK*TS*FLTTSTPICVVG 284
             GM ++PW  T        P  V G
Sbjct: 345  PGMTSIPWNLTLLLAVKFQPSSVTG 369


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
            gi|223551427|gb|EEF52913.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 374

 Score =  274 bits (700), Expect = 6e-71
 Identities = 186/390 (47%), Positives = 211/390 (54%), Gaps = 30/390 (7%)
 Frame = -2

Query: 1411 MSGSEAGIM-SGRESSFGIQKHQPVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQP 1235
            MSGSE G+M S     FG+   QPV     NMRL F +DG++VYKP +TTAT SP+YQ  
Sbjct: 1    MSGSETGVMTSTTREPFGVVSPQPV---IQNMRLAFGADGSSVYKP-MTTATNSPSYQPS 56

Query: 1234 ITAAGVENAVATTVIPQGISTSMNIG-EQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXXX 1058
             +AA     V    +  GI+ +M  G + M           PDGTM              
Sbjct: 57   PSAASPGGFVEGGSL--GINVNMGSGNDAMKRKRGRPRKYGPDGTMALALVSAPQSVGI- 113

Query: 1057 XXXXXPQQNVQPSGGFXXXXXXXXXXXSM---------------------------KKSR 959
                      QP+GG            S+                           KK R
Sbjct: 114  ---------TQPAGGGGFSTPTSAAATSVGPSTTTIAANPSLPSGSGGGSVSPTGIKKGR 164

Query: 958  GRPPGSGKKQQIAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAIS 779
            GRPPGS KKQQ+ ALGSAG GFTPH+ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAIS
Sbjct: 165  GRPPGSNKKQQLEALGSAGFGFTPHIITVKAGEDVSSKIMSFSQHGPRAVCILSANGAIS 224

Query: 778  NVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXX 599
            NVTLRQ ATSGG+VTYEGRFEI             GQRSRTGGLSVS             
Sbjct: 225  NVTLRQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRSRTGGLSVSLSGPDGRVLGGGV 284

Query: 598  XXXXXXASPVQVVVGSFIADGRKDLK-PNHSEPAAAPAKLXXXXXXXXXXXXXSRGTLSE 422
                  ASPVQVVV SFI+D RK+LK PNH EP +A  +L             SRGT SE
Sbjct: 285  AGLLLAASPVQVVVASFISDDRKELKSPNHLEPLSAMNRLTPVMGTTGPSSPPSRGTFSE 344

Query: 421  XXXXXXXPLNHSTGACNNSNAQGMANVPWK 332
                   PLN STGACNNSN QG++++PWK
Sbjct: 345  SSGGPGSPLNQSTGACNNSNLQGISSMPWK 374


>ref|XP_004168094.1| PREDICTED: uncharacterized LOC101211767 [Cucumis sativus]
          Length = 364

 Score =  245 bits (625), Expect = 3e-62
 Identities = 171/376 (45%), Positives = 203/376 (53%), Gaps = 16/376 (4%)
 Frame = -2

Query: 1411 MSGSEAGIMSGRES-SFGIQKHQPVS-TGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQ 1238
            MSGSE G+++ RE    G+Q     S +GT NMRL F +DGT  YKP+  T +TSP+YQ 
Sbjct: 1    MSGSETGVITSREPFGVGVQNSSLHSQSGTQNMRLAFGADGTG-YKPV--TPSTSPSYQS 57

Query: 1237 PITA----AGVENAVAT-----TVIPQGISTSMNIGEQMXXXXXXXXXXXPDGTMXXXXX 1085
             +      AG+E +        +++P G + +    EQ+           PDG+M     
Sbjct: 58   SMAGVSGNAGIEGSAGGGGGGGSMLPHGFNINSVGSEQIKRKRGRPRKYGPDGSMALALG 117

Query: 1084 XXXXXXXXXXXXXXPQQNVQPSGGFXXXXXXXXXXXSMKKSRGRPPGSGKKQQIAALGSA 905
                             +   + G            S KK++GRP GS KKQQ+ ALGSA
Sbjct: 118  SGPPSGTGCFPPSNMANSASEALG---------SPNSSKKTKGRPLGSKKKQQLEALGSA 168

Query: 904  GIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEG 725
            GIGFTPHVI VKAGEDVSSKIMSFSQ+GPRA+CILSANG+ISNVTLRQ ATSGGTVTYEG
Sbjct: 169  GIGFTPHVIDVKAGEDVSSKIMSFSQNGPRAICILSANGSISNVTLRQPATSGGTVTYEG 228

Query: 724  RFEIXXXXXXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFI 545
            RFEI             GQRSRTGGLSVS                    SPVQVVVGSFI
Sbjct: 229  RFEILSLSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGSVAGLLTALSPVQVVVGSFI 288

Query: 544  ADGRKDLKP---NHSEPAAAPAKLXXXXXXXXXXXXXSRGTLSE-XXXXXXXPLNHSTGA 377
            ADG K+ KP   N    A                   S GTLSE        PLN+S+G 
Sbjct: 289  ADGNKEPKPARQNELTTALPMLNTAGFGHLTGGASSPSHGTLSESSDGSPDSPLNNSSGG 348

Query: 376  CNNSN-AQGMANVPWK 332
            CNNSN  QGM+ +PWK
Sbjct: 349  CNNSNHPQGMSGMPWK 364


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