BLASTX nr result

ID: Coptis21_contig00012314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012314
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297894.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002512701.1| conserved hypothetical protein [Ricinus comm...    82   3e-14
ref|XP_004141157.1| PREDICTED: uncharacterized protein LOC101209...    77   2e-12
ref|XP_002891305.1| hypothetical protein ARALYDRAFT_473830 [Arab...    76   3e-12
gb|AAF69152.1|AC007915_4 F27F5.5 [Arabidopsis thaliana]                75   4e-12

>ref|XP_002297894.1| predicted protein [Populus trichocarpa] gi|222845152|gb|EEE82699.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/63 (60%), Positives = 51/63 (80%)
 Frame = +2

Query: 83  ISITIGILAILRSLSKKFGFEKDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCLPYAV 262
           ++  IG++AI R LSK+FG++KD  LEL  + SDRLG WA+P+YV IHT++L+LCLP AV
Sbjct: 7   VAAVIGLIAIARELSKQFGWDKDAALELLGEWSDRLGVWAMPVYVGIHTISLALCLPCAV 66

Query: 263 FFE 271
           FFE
Sbjct: 67  FFE 69


>ref|XP_002512701.1| conserved hypothetical protein [Ricinus communis]
           gi|223548662|gb|EEF50153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 264

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/67 (56%), Positives = 51/67 (76%)
 Frame = +2

Query: 71  KIWTISITIGILAILRSLSKKFGFEKDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCL 250
           K W +   +GI+AI R L K+ G++K+  L++F + SD LG WA+PIYV IHT+TL+LCL
Sbjct: 4   KWWKVGAILGIVAIGRELIKQTGWDKEAALKVFAEWSDGLGIWAMPIYVGIHTLTLALCL 63

Query: 251 PYAVFFE 271
           PYAVFFE
Sbjct: 64  PYAVFFE 70


>ref|XP_004141157.1| PREDICTED: uncharacterized protein LOC101209858 [Cucumis sativus]
           gi|449528000|ref|XP_004170995.1| PREDICTED:
           uncharacterized protein LOC101229874 [Cucumis sativus]
          Length = 260

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
 Frame = +2

Query: 83  ISITIGILAILRSLSKKFG--FEKDEILELFRDLSDRLGFWAIPIYVLIHTVTLSLCLPY 256
           ++  + ++AILR L K +G  F++D  L++F   SDRLG WA+P YV IHT TL+LCLPY
Sbjct: 11  LAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPY 70

Query: 257 AVFFE 271
           AVFFE
Sbjct: 71  AVFFE 75


>ref|XP_002891305.1| hypothetical protein ARALYDRAFT_473830 [Arabidopsis lyrata subsp.
           lyrata] gi|297337147|gb|EFH67564.1| hypothetical protein
           ARALYDRAFT_473830 [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = +2

Query: 68  RKIWTISITIGILAIL-RSLSKKFGFEKDEILELFRDLSDRLGFWAIPIYVLIHTVTLSL 244
           +K   I+ T+ I+AI+ R  + ++G+ K+  LE  ++ SDRLG WAIP YV +HTVTL+L
Sbjct: 2   KKWLAIAATVAIIAIVVRQGTTQYGWNKESALEKLKEWSDRLGIWAIPTYVAVHTVTLAL 61

Query: 245 CLPYAVFFE 271
           CLP+AVFFE
Sbjct: 62  CLPHAVFFE 70


>gb|AAF69152.1|AC007915_4 F27F5.5 [Arabidopsis thaliana]
          Length = 280

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = +2

Query: 68  RKIWTISITIGILAIL-RSLSKKFGFEKDEILELFRDLSDRLGFWAIPIYVLIHTVTLSL 244
           +K   I+ T+ I+AI+ R  + ++G+ K+  LE  ++ SDRLG WAIP YV +HT+TL+L
Sbjct: 2   KKWLAIAATVAIIAIIVRQGTTQYGWNKEAALEKLKEWSDRLGIWAIPTYVAVHTITLAL 61

Query: 245 CLPYAVFFE 271
           CLP+AVFFE
Sbjct: 62  CLPHAVFFE 70


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