BLASTX nr result

ID: Coptis21_contig00012307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012307
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera...   108   8e-22
emb|CAN70144.1| hypothetical protein VITISV_029929 [Vitis vinifera]   108   8e-22
ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativu...    90   5e-16
ref|NP_001240868.1| uncharacterized protein LOC100812665 [Glycin...    86   5e-15
ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group] g...    86   9e-15

>ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera]
           gi|297737602|emb|CBI26803.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  108 bits (271), Expect = 8e-22
 Identities = 57/106 (53%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = -1

Query: 684 EKTRLAFAVAEQKATSASSAILNNQYVSTGASWVSGAISKVARAAEDVSLMTXXXXXXXX 505
           EKT+ A A+AEQKA+ A SAI+NN YV+TGASWVS A+S V +AAEDVS+MT        
Sbjct: 206 EKTKSALAIAEQKASIAGSAIMNNHYVATGASWVSSALSMVTKAAEDVSVMTREKVGRAE 265

Query: 504 XXXKDILYKARTGVVSDSARLQLDESPAA-PPVVPLDNSIDGKLGI 370
              K+I+Y+ + G V++ A++ LDESPA  PP+VP+D+  D KLG+
Sbjct: 266 EEKKEIIYREKMGFVNEYAQIHLDESPAGEPPIVPVDSVDDCKLGM 311


>emb|CAN70144.1| hypothetical protein VITISV_029929 [Vitis vinifera]
          Length = 399

 Score =  108 bits (271), Expect = 8e-22
 Identities = 58/106 (54%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
 Frame = -1

Query: 684 EKTRLAFAVAEQKATSASSAILNNQYVSTGASWVSGAISKVARAAEDVSLMTXXXXXXXX 505
           EKT+ A A+AEQKA+ A SAI+NN YV+TGASWVS A+S V +AAEDVS+MT        
Sbjct: 293 EKTKSALAIAEQKASIAGSAIMNNHYVATGASWVSSALSMVTKAAEDVSVMTREKVXRAE 352

Query: 504 XXXKDILYKARTGVVSDSARLQLDESPAA-PPVVPLDNSIDGKLGI 370
              K+I+Y+ + G V++ A++ LDESPA  PP+VP+D+  D KLG+
Sbjct: 353 EEKKEIIYREKMGFVNEYAQIHLDESPAGEPPIVPVDSVDDCKLGM 398


>ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativus]
           gi|449523840|ref|XP_004168931.1| PREDICTED: protein
           vip1-like [Cucumis sativus]
          Length = 278

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = -1

Query: 684 EKTRLAFAVAEQKATSASSAILNNQYVSTGASWVSGAISKVARAAEDVSLMTXXXXXXXX 505
           EKT+ A AVAEQKATSA +A+++N YV TGA+W S A++ V +AAE+V+ MT        
Sbjct: 178 EKTKSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAE 237

Query: 504 XXXKDILYKARTGVVSDSARLQLDES-PAAPPVVPLDNS 391
              K+ +Y+ RTG++S+ A L LDE  P  P +VP++++
Sbjct: 238 EEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSA 276


>ref|NP_001240868.1| uncharacterized protein LOC100812665 [Glycine max]
           gi|255642433|gb|ACU21480.1| unknown [Glycine max]
          Length = 310

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = -1

Query: 684 EKTRLAFAVAEQKATSASSAILNNQYVSTGASWVSGAISKVARAAEDVSLMTXXXXXXXX 505
           E T+ A A AEQKA+SA SAI++N YV +GASW S A + +A+AAEDVS MT        
Sbjct: 203 EMTKSAMAAAEQKASSAGSAIMSNPYVKSGASWFSSAFTAIAKAAEDVSTMTKEKVEQAV 262

Query: 504 XXXKDILYKARTGVVSDSARLQLDE-SPAAPPVVPLDNSIDGKL 376
               +I+Y  R G V + A+  L+E S   P VVP+++  D KL
Sbjct: 263 VERNEIIYGERKGTVDEFAKTHLEEASDIGPAVVPVNSDDDRKL 306


>ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group]
           gi|18071362|gb|AAL58221.1|AC090882_24 putative splicing
           regulatory protein [Oryza sativa Japonica Group]
           gi|108710741|gb|ABF98536.1| RRM-containing protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549544|dbj|BAF12987.1| Os03g0713600 [Oryza sativa
           Japonica Group]
          Length = 284

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 50/104 (48%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = -1

Query: 684 EKTRLAFAVAEQKATSASSAILNNQYVSTGASWVSGAISKVARAAEDVSLMTXXXXXXXX 505
           E T+ A A AEQKA+ ASSAI+NNQYVS GASW++ A   V +AA D+S MT        
Sbjct: 178 ELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAE 237

Query: 504 XXXKDILYKARTGVVSDSARLQLDE-SPAAPPVVPLDNSIDGKL 376
              K I+++ R G+VSD A++ LDE S   P V+PL++  + KL
Sbjct: 238 EERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLESVDEQKL 281


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