BLASTX nr result

ID: Coptis21_contig00012305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012305
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241643.1| uncharacterized protein LOC100786431 [Glycin...   108   3e-22
ref|NP_197447.2| nudix hydrolase 20 [Arabidopsis thaliana] gi|68...   108   6e-22
ref|XP_002871886.1| hypothetical protein ARALYDRAFT_909981 [Arab...   107   8e-22
ref|NP_197448.2| nudix hydrolase 24 [Arabidopsis thaliana] gi|68...   107   1e-21
ref|NP_001190340.1| nudix hydrolase 24 [Arabidopsis thaliana] gi...   107   1e-21

>ref|NP_001241643.1| uncharacterized protein LOC100786431 [Glycine max]
           gi|255634678|gb|ACU17701.1| unknown [Glycine max]
          Length = 280

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 7/101 (6%)
 Frame = +3

Query: 42  YLQGFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAEHLRKFKDVFTFVED----- 206
           YLQGF  +++ CNR SEK+S+F PF +E  +VG+IH  F EHLR F DVF F  D     
Sbjct: 76  YLQGFSHKLQLCNRASEKQSEFLPFVIEDHVVGFIHNGFVEHLRDFGDVFVFPIDKNNGG 135

Query: 207 --GVYVTLHASLGSPDDRTSAVGYVIERLLGKGLIPGIRNE 323
             G +V+LH +L + D+RTSAVGYV+ER LG+  IPGIR+E
Sbjct: 136 PYGDFVSLHPTLKTADERTSAVGYVVER-LGEEQIPGIRDE 175


>ref|NP_197447.2| nudix hydrolase 20 [Arabidopsis thaliana]
           gi|68565915|sp|Q8VXZ0.1|NUD20_ARATH RecName: Full=Nudix
           hydrolase 20, chloroplastic; Short=AtNUDT20; Flags:
           Precursor gi|18377777|gb|AAL67038.1| unknown protein
           [Arabidopsis thaliana] gi|21436069|gb|AAM51235.1|
           unknown protein [Arabidopsis thaliana]
           gi|332005327|gb|AED92710.1| nudix hydrolase 20
           [Arabidopsis thaliana]
          Length = 374

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 7/102 (6%)
 Frame = +3

Query: 39  SYLQGFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAEHLRKFKDVFTFVEDGV-- 212
           S L GF ++I  CNR SEK  +F PF +E+QIVGYIHK F E+LR+F D+FTF ++G   
Sbjct: 76  SDLTGFFEKINRCNRGSEKLGEFIPFVIEEQIVGYIHKRFTEYLREFHDIFTFSQNGSCP 135

Query: 213 -----YVTLHASLGSPDDRTSAVGYVIERLLGKGLIPGIRNE 323
                YVTL+  L  P+DRT AV  VI+ L  KG+IPGIRNE
Sbjct: 136 DRVDGYVTLNLMLQKPEDRTRAVADVIKILGDKGIIPGIRNE 177


>ref|XP_002871886.1| hypothetical protein ARALYDRAFT_909981 [Arabidopsis lyrata subsp.
           lyrata] gi|297317723|gb|EFH48145.1| hypothetical protein
           ARALYDRAFT_909981 [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 7/102 (6%)
 Frame = +3

Query: 39  SYLQGFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAEHLRKFKDVFTFVEDGVY- 215
           S L GF +++  CNR SEK ++F PF +E+QIVGYIHK F E+LR+F D+FTF ++G Y 
Sbjct: 72  SDLTGFLEKVDRCNRGSEKLAEFIPFVIEEQIVGYIHKGFTEYLREFHDIFTFSQNGSYH 131

Query: 216 ------VTLHASLGSPDDRTSAVGYVIERLLGKGLIPGIRNE 323
                 VTL+  L  P+DRT AV  VI+ L  KG+IPGIRNE
Sbjct: 132 DRVDGFVTLNLMLEKPEDRTRAVADVIKVLGDKGIIPGIRNE 173


>ref|NP_197448.2| nudix hydrolase 24 [Arabidopsis thaliana]
           gi|68565860|sp|P0C026.1|NUD24_ARATH RecName: Full=Nudix
           hydrolase 24, chloroplastic; Short=AtNUDT24; Flags:
           Precursor gi|332005328|gb|AED92711.1| nudix hydrolase 24
           [Arabidopsis thaliana]
          Length = 365

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/95 (53%), Positives = 68/95 (71%)
 Frame = +3

Query: 39  SYLQGFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAEHLRKFKDVFTFVEDGVYV 218
           S L GF +++  CNR  EK  +F PF +E+QIVGYIHK F ++LR F D+FTF + G +V
Sbjct: 74  SDLTGFLEKVDRCNRGLEKLGEFIPFVIEEQIVGYIHKGFTKYLRDFNDIFTFSQYGGHV 133

Query: 219 TLHASLGSPDDRTSAVGYVIERLLGKGLIPGIRNE 323
           TL+  L  P++RT AV +VI+ L  KG+IPGIRNE
Sbjct: 134 TLNMMLDKPEERTRAVAHVIKILGNKGIIPGIRNE 168


>ref|NP_001190340.1| nudix hydrolase 24 [Arabidopsis thaliana]
           gi|332005329|gb|AED92712.1| nudix hydrolase 24
           [Arabidopsis thaliana]
          Length = 357

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/95 (53%), Positives = 68/95 (71%)
 Frame = +3

Query: 39  SYLQGFQKRIRSCNRDSEKKSDFFPFFVEQQIVGYIHKNFAEHLRKFKDVFTFVEDGVYV 218
           S L GF +++  CNR  EK  +F PF +E+QIVGYIHK F ++LR F D+FTF + G +V
Sbjct: 74  SDLTGFLEKVDRCNRGLEKLGEFIPFVIEEQIVGYIHKGFTKYLRDFNDIFTFSQYGGHV 133

Query: 219 TLHASLGSPDDRTSAVGYVIERLLGKGLIPGIRNE 323
           TL+  L  P++RT AV +VI+ L  KG+IPGIRNE
Sbjct: 134 TLNMMLDKPEERTRAVAHVIKILGNKGIIPGIRNE 168


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