BLASTX nr result

ID: Coptis21_contig00012301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012301
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331830.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
emb|CBI22574.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002513612.1| hevamine-A precursor, putative [Ricinus comm...   145   3e-33
gb|ACH54087.1| class III chitinase [Vitis vinifera]                   145   3e-33
ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinif...   145   3e-33

>ref|XP_002331830.1| predicted protein [Populus trichocarpa] gi|222875068|gb|EEF12199.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = +3

Query: 3   VSTSLAAGGIAIYWGQNGNEGTLASTCATGKYAFVNIAFLNIFGNGRTPELNLAGHCNPL 182
           + +S AAGGI+IYWGQNGNEGTLA TCATG+YA+VNIAFLN FGNG+TPE+NLAGHCNP 
Sbjct: 20  IKSSHAAGGISIYWGQNGNEGTLAQTCATGRYAYVNIAFLNKFGNGQTPEMNLAGHCNPA 79

Query: 183 NNGCTFVSQGIRSCQSRGIKVMLSLG 260
           N GCT VS GI+SCQ +GIKV+LSLG
Sbjct: 80  NGGCTIVSGGIKSCQQQGIKVLLSLG 105


>emb|CBI22574.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = +3

Query: 21  AGGIAIYWGQNGNEGTLASTCATGKYAFVNIAFLNIFGNGRTPELNLAGHCNPLNNGCTF 200
           AGGIAIYWGQNGNEGTL  TC TGKY++VNIAFLN FGNG+TPE+NLAGHCNP +NGCT 
Sbjct: 39  AGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTS 98

Query: 201 VSQGIRSCQSRGIKVMLSLG 260
           VS GIR+CQ+RGIKVMLS+G
Sbjct: 99  VSTGIRNCQNRGIKVMLSIG 118


>ref|XP_002513612.1| hevamine-A precursor, putative [Ricinus communis]
           gi|223547520|gb|EEF49015.1| hevamine-A precursor,
           putative [Ricinus communis]
          Length = 297

 Score =  145 bits (366), Expect = 3e-33
 Identities = 64/80 (80%), Positives = 72/80 (90%)
 Frame = +3

Query: 21  AGGIAIYWGQNGNEGTLASTCATGKYAFVNIAFLNIFGNGRTPELNLAGHCNPLNNGCTF 200
           AGGIAIYWGQNGNEGTL +TCA GKY++VNIAFLN FGNG+TPE+NLAGHCNP  NGCT 
Sbjct: 24  AGGIAIYWGQNGNEGTLEATCAAGKYSYVNIAFLNKFGNGQTPEINLAGHCNPATNGCTI 83

Query: 201 VSQGIRSCQSRGIKVMLSLG 260
           +S GI+SCQ RGIKV+LSLG
Sbjct: 84  ISNGIKSCQKRGIKVLLSLG 103


>gb|ACH54087.1| class III chitinase [Vitis vinifera]
          Length = 297

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = +3

Query: 21  AGGIAIYWGQNGNEGTLASTCATGKYAFVNIAFLNIFGNGRTPELNLAGHCNPLNNGCTF 200
           AGGIAIYWGQNGNEGTL  TC TGKY++VNIAFLN FGNG+TPE+NLAGHCNP +NGCT 
Sbjct: 25  AGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTS 84

Query: 201 VSQGIRSCQSRGIKVMLSLG 260
           VS GIR+CQ+RGIKVMLS+G
Sbjct: 85  VSTGIRNCQNRGIKVMLSIG 104


>ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinifera]
          Length = 297

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = +3

Query: 21  AGGIAIYWGQNGNEGTLASTCATGKYAFVNIAFLNIFGNGRTPELNLAGHCNPLNNGCTF 200
           AGGIAIYWGQNGNEGTL  TC TGKY++VNIAFLN FGNG+TPE+NLAGHCNP +NGCT 
Sbjct: 25  AGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTS 84

Query: 201 VSQGIRSCQSRGIKVMLSLG 260
           VS GIR+CQ+RGIKVMLS+G
Sbjct: 85  VSTGIRNCQNRGIKVMLSIG 104


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