BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012299
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...   148   3e-33
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...   144   6e-32
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   139   1e-30
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   130   5e-28

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  152 bits (384), Expect = 2e-34
 Identities = 120/358 (33%), Positives = 174/358 (48%), Gaps = 15/358 (4%)
 Frame = +1

Query: 34   SEEDRLSYLDSSILHRIFSLVDMKHAVQCSVLSSRWRYFWTTLPILNISYRIFSDLIKKK 213
            + EDR+S L + +LHRI S VD    VQ  VLS RW   W + P L+ ++  FS LI   
Sbjct: 13   NNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINS- 71

Query: 214  MDWKEGPFVEFVDQV-FLLHRMSSIQRFHLCYDMGFDRVSHHFYSWIRGLIRRNVQELEL 390
             D+ E   V F D +  +L R ++ +   +  D+      H  YS +  LI   V+    
Sbjct: 72   -DYYEDEMVNFTDFINQVLVRRNNFKAIKISLDL----CGHTRYSLVESLIYYAVKHHAE 126

Query: 391  DINIPFNSRN-KNHFPFCLFTCESLVVLKLKFGHLRYTLALPNNIFLPALKTLHLQGVRF 567
            +I I    R+     P C F CESL  LKL+   +   +ALP ++ LP+LKTLHL G + 
Sbjct: 127  EICIDTACRDVPIVLPRCFFNCESLRSLKLR---IDGGIALPKSLGLPSLKTLHLGGAQN 183

Query: 568  KDDSLTSNFLSSCPVLESLIIMDSELAKLNNLVISGSELKHLVIETHSYDGERREPVYCK 747
             D  +     SSCP LE+L I D  L  + N  I    LK L I    Y    R    CK
Sbjct: 184  FDGKI----FSSCPNLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMRG---CK 236

Query: 748  IKIYAPKLVSFRCKDYMGKDYSFESLPSHVNVDIDVEVESLYRYHRVEFPAEE------- 906
            + ++APKL SF+        +S  +L S    D++V ++  Y  H  +F  +E       
Sbjct: 237  VMLFAPKLTSFKFDGNTPLFWSEVNLTS--LDDVNVVLQRYYYRHDYQFYVDEDEYISGE 294

Query: 907  ------YVKRMIRYLRELCHVKSLTLAAWFLQIVSTPPAALESLSMQFLNLRYIKLNT 1062
                  +   +++ L + C  KSLTL+   ++++S  PAAL      F NL+Y+KL T
Sbjct: 295  DETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNKHPSPFSNLKYLKLKT 352


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
            gi|222873903|gb|EEF11034.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  148 bits (373), Expect = 3e-33
 Identities = 119/360 (33%), Positives = 176/360 (48%), Gaps = 17/360 (4%)
 Frame = +1

Query: 34   SEEDRLSYLDSSILHRIFSLVDMKHAVQCSVLSSRWRYFWTTLPILNISYRIFSDLIKKK 213
            + EDR+S L + +LH I S VD    VQ  VLS RW   W + P L+ ++  FS LI   
Sbjct: 32   NNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINS- 90

Query: 214  MDWKEGPFVEFVDQVF-LLHRMSSIQRFHLCYDMGFDRVSHHFYSWIRGLIRRNVQELEL 390
             D+ +     F D ++ +L R ++++ F L  D   D       S I   ++ +V+E+ +
Sbjct: 91   -DYYDDDMNNFTDFIYHVLVRRNNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEISI 149

Query: 391  DI---NIPFNSRNKNHFPFCLFTCESLVVLKLKFGHLRYTLALPNNIFLPALKTLHLQGV 561
            +    ++P         P C F CESL  LKLK   +   LALP ++ L +LKTLHL G 
Sbjct: 150  NTAHWDVPI------VLPRCFFDCESLRSLKLK---VDGGLALPKSLGLQSLKTLHLGGA 200

Query: 562  RFKDDSLTSNFLSSCPVLESLIIMDSELAKLNNLVISGSELKHLVIETHSYDGERREPVY 741
            +  D  +     SSCP LE+L I D  L  + N  I    LK L I    Y+   R    
Sbjct: 201  QNFDGKI----FSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYN---RIKQG 253

Query: 742  CKIKIYAPKLVSFRCKDYMGKDYSFESLPSHVNVDIDVEVESLYRYHRVEF--PAEEYVK 915
            CK+ + APKL SF+        +S  +L S    D++V ++  +  H   F    +EY+ 
Sbjct: 254  CKVMLVAPKLTSFKFDGNTPLFWSDVNLTS--LDDVNVVLQRYHHSHNYPFYVVEDEYIS 311

Query: 916  -----------RMIRYLRELCHVKSLTLAAWFLQIVSTPPAALESLSMQFLNLRYIKLNT 1062
                        +I+ L + C  KSLTL+   ++I+S  PAAL+     F NL+Y+KL T
Sbjct: 312  EEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKLKT 371


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
            gi|222873902|gb|EEF11033.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  144 bits (362), Expect = 6e-32
 Identities = 118/362 (32%), Positives = 175/362 (48%), Gaps = 19/362 (5%)
 Frame = +1

Query: 34   SEEDRLSYLDSSILHRIFSLVDMKHAVQCSVLSSRWRYFWTTLPILNISYRIFSDLIKKK 213
            + EDR+S L + +LH I S VD    VQ  VLS RW   W + P L+ ++  FS LI   
Sbjct: 32   NNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINS- 90

Query: 214  MDWKEGPFVEFVDQVF-LLHRMSSIQRFHLCYDMGFDRVSHHFYSWIRGLIRRNVQELEL 390
             D+ +     F D ++ +L R  +++   +  D+  D       S I   ++ +V+E+ +
Sbjct: 91   -DYYDDEVNNFTDFIYHVLVRRHNLKAVKISLDILRDTRCSLVESLIYYAVKHHVEEISV 149

Query: 391  DI---NIPFNSRNKNHFPFCLFTCESLVVLKLKFGHLRYTLALPNNIFLPALKTLHLQGV 561
            +    ++P         P C F CESL  LKLK   +   +ALP ++ L +LKTLHL G 
Sbjct: 150  NTAHWDMPI------VLPRCFFDCESLRSLKLK---VDGGIALPKSLGLQSLKTLHLGGA 200

Query: 562  RFKDDSLTSNFLSSCPVLESLIIMDSELAKLNNLVISGSELKHLVIETHSYDGERREPVY 741
            R  D  +     S+CP LE+L I D  L  + N  I    LK L I    Y    R    
Sbjct: 201  RNFDGKI----FSTCPNLENLKIEDIYLNTIENFNIHALNLKSLEILNWRYGRIMRG--- 253

Query: 742  CKIKIYAPKLVSFRCKDYMGKDYSFESLPSHVNVDIDVEVESLYRYHRVEFP----AEEY 909
            CK+ ++APKL SF+   + G    F S  +  ++D DV V      H   +P     +EY
Sbjct: 254  CKVMLFAPKLTSFK---FYGNTPLFWSEVNLTSLD-DVNVVLQRYQHSHNYPFYVVEDEY 309

Query: 910  VK-----------RMIRYLRELCHVKSLTLAAWFLQIVSTPPAALESLSMQFLNLRYIKL 1056
            +             +I+ L + C  KSLTL+   ++I+S  PAAL+     F NL+Y+KL
Sbjct: 310  ISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKL 369

Query: 1057 NT 1062
             T
Sbjct: 370  KT 371


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  139 bits (351), Expect = 1e-30
 Identities = 122/382 (31%), Positives = 176/382 (46%), Gaps = 16/382 (4%)
 Frame = +1

Query: 43   DRLSYLDSSILHRIFSLVDMKHAVQCSVLSSRWRYFWTTLPILNISYRIF---SDLIKKK 213
            D +S L   +L  I S +  K AV  S+LS RWRY W ++PIL+    ++   S L++  
Sbjct: 10   DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVE-- 67

Query: 214  MDWKEGPFVEFVDQVFLLHRMSSIQRFHLCY-DMGFDRVSHHFYSWIRGLIRRNVQELEL 390
            ++ +   F  FVD V     +S I++F L Y D   D V    YSWI   + R VQEL+L
Sbjct: 68   LEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSV----YSWICIALERRVQELDL 123

Query: 391  DINIPFNSRNKNHFPFCLFTCESLVVLKLKFGHLRYTLALPNNIFLPALKTLHLQGVRFK 570
             + I +    +   P   F C++LVV+KL        L +P  ++LP+LK LHL+ V + 
Sbjct: 124  HLLIDW----RVELPPMFFICKTLVVVKLSCALF---LDIPTTVWLPSLKALHLKSVEYS 176

Query: 571  DDSLTSNFLSSCPVLESLIIMDSELAKLNNLVISGSELKHLVI------ETHSYDGERRE 732
            DD      LS CPVLE L+I   E      + +S   LK L I        H Y+ E ++
Sbjct: 177  DDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQD 236

Query: 733  PVYCKIKIYAPKLVSFRCKDYMGKDYSFESLPSHVNVDIDVEVESLYRYHRVEFPAEEYV 912
                K+ + AP L      DY+ KDY  + LPS V   IDVE +S             Y 
Sbjct: 237  ---YKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYH 293

Query: 913  KRMIRYLRELCHVKSLTLAAWFLQIVSTP------PAALESLSMQFLNLRYIKLNTWLSR 1074
              +   L  + +VK L+L    L  +S        P       ++FL   +I    W   
Sbjct: 294  GPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFL---FIGGFNW--- 347

Query: 1075 DCIHAIICLLNMSPNVETLAVE 1140
                 +   L+ SPN+E L +E
Sbjct: 348  ---DFLPNFLHSSPNLEALVIE 366


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
            vinifera]
          Length = 610

 Score =  130 bits (328), Expect = 5e-28
 Identities = 111/384 (28%), Positives = 187/384 (48%), Gaps = 6/384 (1%)
 Frame = +1

Query: 31   ASEEDRLSYLDSSILHRIFSLVDMKHAVQCSVLSSRWRYFWTTLPILNISYRIFSDLIKK 210
            +S +D +S L  SIL RI S + MK+ V  S+LS RW++ WT +P L   +R        
Sbjct: 70   SSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVFRFR-------- 121

Query: 211  KMDWKEGPFVEFVDQVFLLHRMSSIQRFHLCYDMGFDRVSHHFYSWIRGLIRRNVQELEL 390
                ++  FV  +D+  +LH+ S I++F + +     +       WIR   R+NV+EL L
Sbjct: 122  ---RRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQ-SQFQSSVNVWIRHATRKNVEELHL 177

Query: 391  DINIPFNSRNK-----NHFPFCLFTCESLVVLKLKFGHLRYTLALPNNIFLPALKTLHLQ 555
               +  + R+      +  P  L+   S+V L L F +++ T      I  P+LKTL + 
Sbjct: 178  QFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIKPTWV----ISWPSLKTLSIG 233

Query: 556  GVRFKDDSLTSNFLSSCPVLESLIIMDSELAKLNNLVISGSELKHLVIETHSYDGERREP 735
             V   DD L    LS CP LESL +       +N+L I+ + LK LVI  + Y       
Sbjct: 234  SVELCDD-LIEEILSGCPALESLEL--HHCFGINSLNITSASLKKLVI--NRYWDSSHSH 288

Query: 736  VYCKIKIYAPKLVSFRCKDYM-GKDYSFESLPSHVNVDIDVEVESLYRYHRVEFPAEEYV 912
                +KI AP + S      M  K+   +++PS  +  ++ E+       +  +  + Y 
Sbjct: 289  HRSVLKISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQEGNPKDHY--KLYH 346

Query: 913  KRMIRYLRELCHVKSLTLAAWFLQIVSTPPAALESLSMQFLNLRYIKLNTWLSRDCIHAI 1092
            K +++ L+ + HVK+LT+  W +Q++S      + LS    NL+ + L+T L++  +  I
Sbjct: 347  KVVMKLLKSVNHVKALTVGTWCIQVLSIFEG--KDLSSLLSNLKCLILDTHLNKWDLPGI 404

Query: 1093 ICLLNMSPNVETLAVEVNKKCTMR 1164
              LL  S ++ET  + +   C+ +
Sbjct: 405  ANLLQSSTHLETFVINMISPCSQQ 428