BLASTX nr result

ID: Coptis21_contig00012281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012281
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317351.1| multidrug resistance protein ABC transporter...   214   6e-54
ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump...   211   4e-53
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   210   1e-52
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   210   1e-52
emb|CBI30983.3| unnamed protein product [Vitis vinifera]              186   2e-45

>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1617

 Score =  214 bits (545), Expect = 6e-54
 Identities = 112/171 (65%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
 Frame = -3

Query: 518  QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQCLRSLVLR-EEENKLGREDVMQQDGXXX 342
            +VLE+D P  LL NE SAFSKMVQSTG+ANAQ LRSLV+  E E++LGRE+  Q DG   
Sbjct: 1443 RVLEYDTPEELLSNENSAFSKMVQSTGAANAQYLRSLVMGGERESRLGREENKQLDGPRR 1502

Query: 341  XXXXXXXXXXXXXXLGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVM 162
                          L VSLTSSQNDLQ+LEIEDEN++LKKTKDAV+TLQ VLEGKHDKV+
Sbjct: 1503 WLASSRWAAAAQFALAVSLTSSQNDLQQLEIEDENSVLKKTKDAVVTLQRVLEGKHDKVI 1562

Query: 161  EDTLNQYQIPRDRWWSALYKMVEGLSMISRLGRSRFQQLDYGLENRSINWD 9
            +++LNQYQI RD WWSALYKMVEGL+M+SRLGR R  Q DYGLE+++I+W+
Sbjct: 1563 DESLNQYQISRDGWWSALYKMVEGLAMMSRLGRHRLHQSDYGLEDKTIDWN 1613


>ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
            communis] gi|223534049|gb|EEF35768.1| mgatp-energized
            glutathione s-conjugate pump, putative [Ricinus communis]
          Length = 1569

 Score =  211 bits (538), Expect = 4e-53
 Identities = 111/172 (64%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
 Frame = -3

Query: 518  QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQCLRSLVLREE-ENKLGREDVMQQDGXXX 342
            +VLE+D P  LL NE SAFSKMVQSTG+ANAQ LR LVL  E E++ GRE+  + DG   
Sbjct: 1395 EVLEYDTPEELLSNEGSAFSKMVQSTGAANAQYLRGLVLGGEGESRFGREENKRLDGQRK 1454

Query: 341  XXXXXXXXXXXXXXLGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVM 162
                          L VSLTSS NDLQ+LEI+DEN+IL+KTKDAVITLQGVLEGKHDKV+
Sbjct: 1455 WMASSRWAAAAQFALAVSLTSSHNDLQRLEIDDENSILEKTKDAVITLQGVLEGKHDKVI 1514

Query: 161  EDTLNQYQIPRDRWWSALYKMVEGLSMISRLGRSRFQQLDYGLENRSINWDD 6
            E++LNQ+QI +D WWSALYKMVEGL+M+SRLGR+R  Q DYG ++RSINWD+
Sbjct: 1515 EESLNQHQISKDGWWSALYKMVEGLAMMSRLGRNRLHQSDYGFDDRSINWDN 1566


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
            vinifera]
          Length = 1616

 Score =  210 bits (534), Expect = 1e-52
 Identities = 112/171 (65%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
 Frame = -3

Query: 518  QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQCLRSLVLREE-ENKLGREDVMQQDGXXX 342
            +VLE+D P  LL N++SAFSKMVQSTG+ANA+ LRSLVL  E ENKLGRED  + DG   
Sbjct: 1443 RVLEYDTPEELLSNDRSAFSKMVQSTGAANAEYLRSLVLGGEGENKLGREDNRRLDGQRR 1502

Query: 341  XXXXXXXXXXXXXXLGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVM 162
                          L VSLTSSQNDLQ+LEIEDEN+ILKKTKDAVITLQGVLEGKHDKV+
Sbjct: 1503 WLASSRWTAAAQFALAVSLTSSQNDLQQLEIEDENSILKKTKDAVITLQGVLEGKHDKVI 1562

Query: 161  EDTLNQYQIPRDRWWSALYKMVEGLSMISRLGRSRFQQLDYGLENRSINWD 9
            E+TLNQYQ+ RD WWS+LY+M+EGL+++SRL R+R Q  + G E+RSI+WD
Sbjct: 1563 EETLNQYQVSRDGWWSSLYRMIEGLAVMSRLARNRLQS-ENGFEDRSIDWD 1612


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
            vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
            product [Vitis vinifera]
          Length = 1623

 Score =  210 bits (534), Expect = 1e-52
 Identities = 112/171 (65%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
 Frame = -3

Query: 518  QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQCLRSLVLREE-ENKLGREDVMQQDGXXX 342
            +VLE+D P  LL N++SAFSKMVQSTG+ANA+ LRSLVL  E ENKLGRED  + DG   
Sbjct: 1450 RVLEYDTPEELLSNDRSAFSKMVQSTGAANAEYLRSLVLGGEGENKLGREDNRRLDGQRR 1509

Query: 341  XXXXXXXXXXXXXXLGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVM 162
                          L VSLTSSQNDLQ+LEIEDEN+ILKKTKDAVITLQGVLEGKHDKV+
Sbjct: 1510 WLASSRWTAAAQFALAVSLTSSQNDLQQLEIEDENSILKKTKDAVITLQGVLEGKHDKVI 1569

Query: 161  EDTLNQYQIPRDRWWSALYKMVEGLSMISRLGRSRFQQLDYGLENRSINWD 9
            E+TLNQYQ+ RD WWS+LY+M+EGL+++SRL R+R Q  + G E+RSI+WD
Sbjct: 1570 EETLNQYQVSRDGWWSSLYRMIEGLAVMSRLARNRLQS-ENGFEDRSIDWD 1619


>emb|CBI30983.3| unnamed protein product [Vitis vinifera]
          Length = 1500

 Score =  186 bits (471), Expect = 2e-45
 Identities = 95/171 (55%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
 Frame = -3

Query: 518  QVLEFDAPGHLLLNEKSAFSKMVQSTGSANAQCLRSLVLREE-ENKLGREDVMQQDGXXX 342
            QV+E+D P  LL +E S+FS+MV+STG+ANAQ LRSLV  E+ + K GRE+  Q D    
Sbjct: 1326 QVVEYDTPEELLQDEGSSFSRMVRSTGAANAQYLRSLVFGEDGQKKSGREEAKQLDRQKR 1385

Query: 341  XXXXXXXXXXXXXXLGVSLTSSQNDLQKLEIEDENNILKKTKDAVITLQGVLEGKHDKVM 162
                          L +SLTSSQN LQ L++EDE NILKKT DAV+TL+GVLEG HD+V+
Sbjct: 1386 WLASSRWAAATQFALSISLTSSQNGLQFLDVEDEMNILKKTNDAVLTLRGVLEGTHDEVI 1445

Query: 161  EDTLNQYQIPRDRWWSALYKMVEGLSMISRLGRSRFQQLDYGLENRSINWD 9
            E+ L +YQ+PRDRWWSALYKMVEGL++++RL R RFQQ ++  E+ +++WD
Sbjct: 1446 EEMLKEYQVPRDRWWSALYKMVEGLAVMNRLARHRFQQSEHDFEDTTLDWD 1496


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