BLASTX nr result

ID: Coptis21_contig00012266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012266
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523896.1| hypothetical protein RCOM_1067960 [Ricinus c...    72   4e-11
ref|NP_001145559.1| uncharacterized protein LOC100279019 [Zea ma...    67   2e-09
gb|ACG41226.1| hypothetical protein [Zea mays] gi|195658017|gb|A...    67   2e-09
ref|XP_002456588.1| hypothetical protein SORBIDRAFT_03g038920 [S...    66   3e-09
ref|XP_002278214.1| PREDICTED: uncharacterized protein LOC100263...    66   3e-09

>ref|XP_002523896.1| hypothetical protein RCOM_1067960 [Ricinus communis]
           gi|223536826|gb|EEF38465.1| hypothetical protein
           RCOM_1067960 [Ricinus communis]
          Length = 97

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/48 (70%), Positives = 39/48 (81%)
 Frame = -2

Query: 146 MSPVVKKLTVIEATPTSFEQFGQVIEAAPDGDEFGPQDAQLDLTQGSP 3
           M+  V  L  IEATP SF+++GQVIE +PDGDEFGPQDAQLDLTQG P
Sbjct: 1   MAETVVNLKPIEATPESFKEYGQVIEPSPDGDEFGPQDAQLDLTQGIP 48


>ref|NP_001145559.1| uncharacterized protein LOC100279019 [Zea mays]
           gi|223975745|gb|ACN32060.1| unknown [Zea mays]
           gi|414879855|tpg|DAA56986.1| TPA: hypothetical protein
           ZEAMMB73_252388 [Zea mays]
          Length = 244

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = -2

Query: 134 VKKLTVIEATPTSFEQFGQVIEAAPDGDEFGPQDAQLDLTQGSP 3
           V KL  +EATP SF  FGQVI A+PDGDEFGP DAQLDL++G P
Sbjct: 64  VVKLRAVEATPESFASFGQVIGASPDGDEFGPHDAQLDLSRGIP 107


>gb|ACG41226.1| hypothetical protein [Zea mays] gi|195658017|gb|ACG48476.1|
           hypothetical protein [Zea mays]
          Length = 189

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = -2

Query: 134 VKKLTVIEATPTSFEQFGQVIEAAPDGDEFGPQDAQLDLTQGSP 3
           V KL  +EATP SF  FGQVI A+PDGDEFGP DAQLDL++G P
Sbjct: 9   VVKLRAVEATPESFASFGQVIGASPDGDEFGPHDAQLDLSRGIP 52


>ref|XP_002456588.1| hypothetical protein SORBIDRAFT_03g038920 [Sorghum bicolor]
           gi|241928563|gb|EES01708.1| hypothetical protein
           SORBIDRAFT_03g038920 [Sorghum bicolor]
          Length = 279

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = -2

Query: 134 VKKLTVIEATPTSFEQFGQVIEAAPDGDEFGPQDAQLDLTQGSP 3
           V KL  +EATP SF  FGQVI A+PDGDEFGP DAQLDL+ G P
Sbjct: 99  VVKLRAVEATPESFAPFGQVITASPDGDEFGPHDAQLDLSSGIP 142


>ref|XP_002278214.1| PREDICTED: uncharacterized protein LOC100263359 [Vitis vinifera]
           gi|296086072|emb|CBI31513.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = -2

Query: 140 PVVKKLTVIEATPTSFEQFGQVIEAAPDGDEFGPQDAQLDLTQGSP 3
           P   KLT IEATP +F++FGQVI  +PDG++FGPQDAQLDL++G P
Sbjct: 11  PSKLKLTPIEATPETFKEFGQVIGVSPDGEKFGPQDAQLDLSRGIP 56


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