BLASTX nr result

ID: Coptis21_contig00012262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012262
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269700.1| PREDICTED: methyltransferase-like protein 10...   104   7e-21
ref|XP_002269621.1| PREDICTED: methyltransferase-like protein 10...   104   7e-21
ref|XP_002330099.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
dbj|BAA77395.1| SLL2-S9-protein [Brassica rapa]                        97   1e-18
gb|AAB49423.1| SLL2 [Brassica napus]                                   97   1e-18

>ref|XP_002269700.1| PREDICTED: methyltransferase-like protein 10 isoform 2 [Vitis
           vinifera]
          Length = 273

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   IITSCNHTKDELVQEVDNYNQRRFSAL-DAEISNDQEAFKDSSPFHYVSHVRSYPTFMFG 178
           ++TSCN+TKDEL++EVD+YNQR   A  + +   DQ+  +DS PF YV+HVRSYPTFMFG
Sbjct: 199 VVTSCNNTKDELIREVDSYNQRVLGASQEPDTPKDQDVSRDSPPFRYVNHVRSYPTFMFG 258

Query: 179 GSEGSRVATVAFLRS 223
           GS GSRVATVAFLRS
Sbjct: 259 GSVGSRVATVAFLRS 273


>ref|XP_002269621.1| PREDICTED: methyltransferase-like protein 10 isoform 1 [Vitis
           vinifera] gi|296087211|emb|CBI33585.3| unnamed protein
           product [Vitis vinifera]
          Length = 340

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   IITSCNHTKDELVQEVDNYNQRRFSAL-DAEISNDQEAFKDSSPFHYVSHVRSYPTFMFG 178
           ++TSCN+TKDEL++EVD+YNQR   A  + +   DQ+  +DS PF YV+HVRSYPTFMFG
Sbjct: 266 VVTSCNNTKDELIREVDSYNQRVLGASQEPDTPKDQDVSRDSPPFRYVNHVRSYPTFMFG 325

Query: 179 GSEGSRVATVAFLRS 223
           GS GSRVATVAFLRS
Sbjct: 326 GSVGSRVATVAFLRS 340


>ref|XP_002330099.1| predicted protein [Populus trichocarpa] gi|222871233|gb|EEF08364.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/75 (66%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   IITSCNHTKDELVQEVDNYNQRRFS-ALDAEISNDQEAFKDSSPFHYVSHVRSYPTFMFG 178
           +ITSCN+TKDELVQEV+N+NQRR   +L++E     EA +D  PF Y++HVR+YPTFMFG
Sbjct: 269 VITSCNNTKDELVQEVENFNQRRIDVSLESESMKGHEASRDP-PFRYLNHVRTYPTFMFG 327

Query: 179 GSEGSRVATVAFLRS 223
           GS GSRVATVAFLR+
Sbjct: 328 GSVGSRVATVAFLRN 342


>dbj|BAA77395.1| SLL2-S9-protein [Brassica rapa]
          Length = 337

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/73 (63%), Positives = 60/73 (82%)
 Frame = +2

Query: 2   IITSCNHTKDELVQEVDNYNQRRFSALDAEISNDQEAFKDSSPFHYVSHVRSYPTFMFGG 181
           +ITSCN+TKDEL++EV+N+N R+ S L  ++S++  +  D  PF Y+SHVR+YPTFMFGG
Sbjct: 265 VITSCNNTKDELLEEVENFNMRK-SNLTGDVSSEAASGTDHPPFEYLSHVRTYPTFMFGG 323

Query: 182 SEGSRVATVAFLR 220
           S GSRVATVAFLR
Sbjct: 324 SVGSRVATVAFLR 336


>gb|AAB49423.1| SLL2 [Brassica napus]
          Length = 337

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/73 (63%), Positives = 60/73 (82%)
 Frame = +2

Query: 2   IITSCNHTKDELVQEVDNYNQRRFSALDAEISNDQEAFKDSSPFHYVSHVRSYPTFMFGG 181
           +ITSCN+TKDEL++EV+N+N R+ S L  ++S++  +  D  PF Y+SHVR+YPTFMFGG
Sbjct: 265 VITSCNNTKDELLEEVENFNMRK-SNLTGDVSSEAASGTDYPPFEYLSHVRTYPTFMFGG 323

Query: 182 SEGSRVATVAFLR 220
           S GSRVATVAFLR
Sbjct: 324 SVGSRVATVAFLR 336


Top