BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012256
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   467   e-129
ref|XP_002326860.1| chromatin remodeling complex subunit [Populu...   441   e-121
ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arab...   434   e-119
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]            434   e-119
ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] ...   434   e-119

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  467 bits (1202), Expect = e-129
 Identities = 255/455 (56%), Positives = 316/455 (69%), Gaps = 4/455 (0%)
 Frame = +3

Query: 3    TGKTRLTIVFLQSYMKMFEECRPMIIAPCSMLLTWEEEFKKWNAKIPFHNLNSRDFSGKE 182
            TGKTRLTIVFLQ+YM+++  CRP+IIAP +MLLTWEEEFKKWN  IPFHNLN  ++SGKE
Sbjct: 531  TGKTRLTIVFLQTYMELYPACRPVIIAPRTMLLTWEEEFKKWNVDIPFHNLNKLEYSGKE 590

Query: 183  DEMA----RQLIHGKTQQFKWNRMVKLLSWSKGKSILGISYRLFETLAGRRNIRDEDKKK 350
            +  A    R++ H + Q  K  RMVKL SW K +SILGISY LFE LAG R + D++ KK
Sbjct: 591  NITALNFLRRISH-QGQSAKSIRMVKLYSWKKDRSILGISYTLFEKLAGERVLADQENKK 649

Query: 351  RREILRADEAEEMSRILLGKPSLLVLDEGHTPRNKRTRIWKALEKSKTERRIILSGTPFQ 530
             +  ++     ++ +ILL  P LLVLDEGHTPRN+++ IWKAL K  TERRIILSGTPFQ
Sbjct: 650  VK--VQDYTKVQVRKILLELPGLLVLDEGHTPRNEQSLIWKALSKIDTERRIILSGTPFQ 707

Query: 531  NNFKELYNTLWLVKPKFADSFSSSRTHKISRSTSGNARKDAREKWASLTSSIGKDDDCRL 710
            NNFKELYNTL LV+PKFAD  +  +     R   G     AR KW  LTSSIGK  D ++
Sbjct: 708  NNFKELYNTLCLVRPKFADRIAVEQYGGF-RGKRGRKSNAARGKWDLLTSSIGKIADDKV 766

Query: 711  KQIRTVISPFVHVHTGSVLKENLPGLRDCXXXXXXXXXXXXXXXXXGDIKNQVELEHALC 890
            +++R +I PFVH+H G++L+ENLPGL+D                   + KN +EL + + 
Sbjct: 767  EELRAMIEPFVHIHKGTILQENLPGLKDSVVVLQPSDLQRRLLESIREKKNPLELGYLVS 826

Query: 891  LVSVHPSLWRKCGRSRDDISFIHKITSNKFKLDPYEGVKTSFLLELIRLSEAKQEKVLVF 1070
            L+SVHPSL     R      F  +    K KL+P  GVKT FL+  IR SE   EKVLVF
Sbjct: 827  LISVHPSLLPSDERKL----FFDQTKLEKIKLNPDIGVKTKFLMAFIRFSETMNEKVLVF 882

Query: 1071 SQYLQPFSLIKEQLKDLFNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTK 1250
            SQ+L P + + +QLK  F+W  G+EVL M+G+   K RQS IN FNDP+S+V+VLLASTK
Sbjct: 883  SQFLDPLTYLMDQLKYHFHWIVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTK 942

Query: 1251 ACREGINLVGASRIVLLDVVWNPSVERQAISRAYR 1355
            AC EGI+LVGASR++LLDVVWNPSVERQAISRAYR
Sbjct: 943  ACSEGISLVGASRVILLDVVWNPSVERQAISRAYR 977


>ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222835175|gb|EEE73610.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 576

 Score =  441 bits (1133), Expect = e-121
 Identities = 241/461 (52%), Positives = 307/461 (66%), Gaps = 10/461 (2%)
 Frame = +3

Query: 3    TGKTRLTIVFLQSYMKMFEECRPMIIAPCSMLLTWEEEFKKWNAKIPFHNLNSRDFSGKE 182
            TGKTRLTIVFLQ+YM+++   RP+I+APCSMLLTWE EF KW   IPFH +N ++ SGKE
Sbjct: 45   TGKTRLTIVFLQTYMQLYPTSRPVIVAPCSMLLTWEAEFLKWGVDIPFHIMNKKNLSGKE 104

Query: 183  DEMARQLIHG-KTQQFKWN--RMVKLLSWSKGKSILGISYRLFETLAGRRNIRDEDKKKR 353
            +  A  L    K  +   N  RMVKL SW K +SILGISYRLFE L G       ++K +
Sbjct: 105  NRTAMDLFRELKPAERGLNAIRMVKLYSWKKERSILGISYRLFEELVG-------EEKSK 157

Query: 354  REILRADEAEEMSRILLGKPSLLVLDEGHTPRNKRTRIWKALEKSKTERRIILSGTPFQN 533
             ++    E +++ ++LL  P LLVLDEGHTPRN R+RIWKAL K +T++RIILSGTPFQN
Sbjct: 158  TKVSDKTEDDQVRKVLLELPGLLVLDEGHTPRNDRSRIWKALSKVQTQKRIILSGTPFQN 217

Query: 534  NFKELYNTLWLVKPKFADSFSSSRTHKISRSTSGNARKDAREKWASLTSSIGKDDDCRLK 713
            NF ELYNTL LVKPKFAD  S++               DAR  WASLT++IGK  D +L+
Sbjct: 218  NFDELYNTLCLVKPKFADEISNT---------------DARRNWASLTTAIGKVTDDKLE 262

Query: 714  -----QIRTVISPFVHVHTGSVLKENLPGLRDCXXXXXXXXXXXXXXXXXGDIK--NQVE 872
                 ++R +I  FVHVH G VL+E LPGLRD                    I   +  E
Sbjct: 263  AQRVEELRKMIWQFVHVHKGGVLRERLPGLRDSVVILQPVHLQKTLLENVKQINGLDHFE 322

Query: 873  LEHALCLVSVHPSLWRKCGRSRDDISFIHKITSNKFKLDPYEGVKTSFLLELIRLSEAKQ 1052
            +E+ L ++SVHPSL  +      +  F+ ++     +  P  GVKT FL+ELIRL +A+ 
Sbjct: 323  MEYLLSVLSVHPSLLPEKSVGTLEFKFVDRMELEMLRSKPEAGVKTKFLMELIRLCQARN 382

Query: 1053 EKVLVFSQYLQPFSLIKEQLKDLFNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSSKVKV 1232
            EKVLVFSQYL+P +L+ +QL+  F+W +GE++L M GK K   RQ +I +FN+ +S  KV
Sbjct: 383  EKVLVFSQYLEPLNLVIKQLESNFSWIQGEDILYMHGKLKIDERQILIKHFNNANSNAKV 442

Query: 1233 LLASTKACREGINLVGASRIVLLDVVWNPSVERQAISRAYR 1355
            LLAST+AC EGINLVGASR+VLLDV+WNPSVERQAISRAYR
Sbjct: 443  LLASTRACSEGINLVGASRVVLLDVLWNPSVERQAISRAYR 483


>ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp.
            lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein
            ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata]
          Length = 1406

 Score =  434 bits (1117), Expect = e-119
 Identities = 240/465 (51%), Positives = 308/465 (66%), Gaps = 14/465 (3%)
 Frame = +3

Query: 3    TGKTRLTIVFLQSYMKMFEECRPMIIAPCSMLLTWEEEFKKWNAKIPFHNLNSRDFSGKE 182
            TGKTRLTI+FLQ+Y++ F +C+P+IIAP S+LLTW EEFKKWN  IPFHNL+S DF+GKE
Sbjct: 863  TGKTRLTIIFLQAYLQCFPDCKPVIIAPASLLLTWAEEFKKWNISIPFHNLSSLDFTGKE 922

Query: 183  DEMARQLIHGKTQQFKWN---RMVKLLSWSKGKSILGISYRLFETLAGRRNIRDEDKKKR 353
               A  L+  K    + N   RMVK+ SW K KSILGISY L+E LAG   ++DEDKK +
Sbjct: 923  SSAALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAG---VKDEDKKTK 979

Query: 354  --REILRADEAEEMSRILLGKPSLLVLDEGHTPRNKRTRIWKALEKSKTERRIILSGTPF 527
              RE+    E +++  IL+G+P LLVLDE HTPRN+R+ IWK L K +T++RI+LSGTPF
Sbjct: 980  TVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPF 1039

Query: 528  QNNFKELYNTLWLVKPKFADSFSSSRTHKISRSTSGNARKDAREKWASLTSSIGKDDDCR 707
            QNNF+EL N L L +PK+ +  +S  T K S  T     K A          +G + + R
Sbjct: 1040 QNNFQELCNVLGLARPKYLERLTS--TLKKSGMTVTKRGKKA----------LGNEINNR 1087

Query: 708  -LKQIRTVISPFVHVHTGSVLKENLPGLRDCXXXXXXXXXXXXXXXXXG-----DIKNQV 869
             +++++ V+ PFVHVH GS+L+ +LPGLR+C                         KN  
Sbjct: 1088 GIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHNRKTKNVF 1147

Query: 870  ELEHALCLVSVHPSLWRKCGRS-RDDISFIHKITSN--KFKLDPYEGVKTSFLLELIRLS 1040
            E EH L LVSVHPSL  +C  S ++ +S    + +   K +LDP + VKT FL+E + L 
Sbjct: 1148 ETEHKLSLVSVHPSLVSRCKLSEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELC 1207

Query: 1041 EAKQEKVLVFSQYLQPFSLIKEQLKDLFNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSS 1220
            E  +EKVLVFSQY+ P  LI + L   F W  G+EVL M GK + K RQ++IN FNDP S
Sbjct: 1208 EVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGQEVLYMHGKLEQKQRQTLINEFNDPKS 1267

Query: 1221 KVKVLLASTKACREGINLVGASRIVLLDVVWNPSVERQAISRAYR 1355
            K KV LASTKAC EGI+LVGASR++LLDVVWNP+VERQAISRAYR
Sbjct: 1268 KAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYR 1312


>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
          Length = 1465

 Score =  434 bits (1115), Expect = e-119
 Identities = 237/465 (50%), Positives = 309/465 (66%), Gaps = 14/465 (3%)
 Frame = +3

Query: 3    TGKTRLTIVFLQSYMKMFEECRPMIIAPCSMLLTWEEEFKKWNAKIPFHNLNSRDFSGKE 182
            TGKTRLTI+FLQ+Y++ F +C+P+IIAP S+LLTW EEFKKWN  IPFHNL+S DF+GKE
Sbjct: 922  TGKTRLTIIFLQAYLQCFPDCKPVIIAPASLLLTWAEEFKKWNISIPFHNLSSLDFTGKE 981

Query: 183  DEMARQLIHGKTQQFKWN---RMVKLLSWSKGKSILGISYRLFETLAGRRNIRDEDKKKR 353
            +  A  L+  K    + N   RMVK+ SW K KSILGISY L+E LAG   ++DEDKK +
Sbjct: 982  NSAALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAG---VKDEDKKTK 1038

Query: 354  --REILRADEAEEMSRILLGKPSLLVLDEGHTPRNKRTRIWKALEKSKTERRIILSGTPF 527
              RE+    E +++  IL+G+P LLVLDE HTPRN+R+ IWK L K +T++RI+LSGTPF
Sbjct: 1039 MVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPF 1098

Query: 528  QNNFKELYNTLWLVKPKFADSFSSSRTHKISRSTSGNARKDAREKWASLTSSIGKDDDCR 707
            QNNF EL N L L +PK+ +  +S+   K   + +   +K+           +G + + R
Sbjct: 1099 QNNFLELCNVLGLARPKYLERLTST-LKKSGMTVTKRGKKN-----------LGNEINNR 1146

Query: 708  -LKQIRTVISPFVHVHTGSVLKENLPGLRDCXXXXXXXXXXXXXXXXXG-----DIKNQV 869
             +++++ V+ PFVHVH GS+L+ +LPGLR+C                         KN  
Sbjct: 1147 GIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHNRKTKNVF 1206

Query: 870  ELEHALCLVSVHPSLWRKCGRS-RDDISFIHKITSN--KFKLDPYEGVKTSFLLELIRLS 1040
            E EH L LVSVHPSL  +C  S ++ +S    + +   K +LDP + VKT FL+E + L 
Sbjct: 1207 ETEHKLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELC 1266

Query: 1041 EAKQEKVLVFSQYLQPFSLIKEQLKDLFNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSS 1220
            E  +EKVLVFSQY+ P  LI + L   F W  GEEVL M GK + K RQ++IN FNDP S
Sbjct: 1267 EVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKS 1326

Query: 1221 KVKVLLASTKACREGINLVGASRIVLLDVVWNPSVERQAISRAYR 1355
            K KV LASTKAC EGI+LVGASR++LLDVVWNP+VERQAISRAYR
Sbjct: 1327 KAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYR 1371


>ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana]
            gi|332189724|gb|AEE27845.1| chromatin remodeling 31
            [Arabidopsis thaliana]
          Length = 1410

 Score =  434 bits (1115), Expect = e-119
 Identities = 237/465 (50%), Positives = 309/465 (66%), Gaps = 14/465 (3%)
 Frame = +3

Query: 3    TGKTRLTIVFLQSYMKMFEECRPMIIAPCSMLLTWEEEFKKWNAKIPFHNLNSRDFSGKE 182
            TGKTRLTI+FLQ+Y++ F +C+P+IIAP S+LLTW EEFKKWN  IPFHNL+S DF+GKE
Sbjct: 867  TGKTRLTIIFLQAYLQCFPDCKPVIIAPASLLLTWAEEFKKWNISIPFHNLSSLDFTGKE 926

Query: 183  DEMARQLIHGKTQQFKWN---RMVKLLSWSKGKSILGISYRLFETLAGRRNIRDEDKKKR 353
            +  A  L+  K    + N   RMVK+ SW K KSILGISY L+E LAG   ++DEDKK +
Sbjct: 927  NSAALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAG---VKDEDKKTK 983

Query: 354  --REILRADEAEEMSRILLGKPSLLVLDEGHTPRNKRTRIWKALEKSKTERRIILSGTPF 527
              RE+    E +++  IL+G+P LLVLDE HTPRN+R+ IWK L K +T++RI+LSGTPF
Sbjct: 984  MVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPF 1043

Query: 528  QNNFKELYNTLWLVKPKFADSFSSSRTHKISRSTSGNARKDAREKWASLTSSIGKDDDCR 707
            QNNF EL N L L +PK+ +  +S+   K   + +   +K+           +G + + R
Sbjct: 1044 QNNFLELCNVLGLARPKYLERLTST-LKKSGMTVTKRGKKN-----------LGNEINNR 1091

Query: 708  -LKQIRTVISPFVHVHTGSVLKENLPGLRDCXXXXXXXXXXXXXXXXXG-----DIKNQV 869
             +++++ V+ PFVHVH GS+L+ +LPGLR+C                         KN  
Sbjct: 1092 GIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHNRKTKNVF 1151

Query: 870  ELEHALCLVSVHPSLWRKCGRS-RDDISFIHKITSN--KFKLDPYEGVKTSFLLELIRLS 1040
            E EH L LVSVHPSL  +C  S ++ +S    + +   K +LDP + VKT FL+E + L 
Sbjct: 1152 ETEHKLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELC 1211

Query: 1041 EAKQEKVLVFSQYLQPFSLIKEQLKDLFNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSS 1220
            E  +EKVLVFSQY+ P  LI + L   F W  GEEVL M GK + K RQ++IN FNDP S
Sbjct: 1212 EVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKS 1271

Query: 1221 KVKVLLASTKACREGINLVGASRIVLLDVVWNPSVERQAISRAYR 1355
            K KV LASTKAC EGI+LVGASR++LLDVVWNP+VERQAISRAYR
Sbjct: 1272 KAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYR 1316