BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012251
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron sp...   235   2e-69
ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-67
ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycin...   226   2e-67
ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus c...   224   3e-67
ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron sp...   218   3e-64

>ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2, chloroplastic [Vitis vinifera]
           gi|296087264|emb|CBI33638.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  235 bits (599), Expect(2) = 2e-69
 Identities = 110/130 (84%), Positives = 123/130 (94%)
 Frame = -2

Query: 704 ISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGESVGPLAAYYQVPLRHILL 525
           IS+EEGI LNTIQSKAL+GIGSIGEVP+LLAK QAYMN+SGESVGPLAAYYQVPLRHIL+
Sbjct: 79  ISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLRHILV 138

Query: 524 IYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRLCIGIGNPPGTMDRKAYLL 345
           +YDEM+LPNGV+RL P+GGHGYHNG+K+V+ HLDGC+ FPRLCIGIGNPPGTMD KAYLL
Sbjct: 139 VYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLL 198

Query: 344 QKFSSEERKQ 315
           QKFS EERKQ
Sbjct: 199 QKFSFEERKQ 208



 Score = 54.3 bits (129), Expect(2) = 2e-69
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = -3

Query: 232 VDIALEQAVEAVRNLLLKGFDDNITKFNLGQKYKFHRV 119
           +D A EQ + AVRNL+L GF+ + T+FNLGQKYK+H+V
Sbjct: 209 IDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246


>ref|XP_002305823.1| predicted protein [Populus trichocarpa] gi|222848787|gb|EEE86334.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  226 bits (576), Expect(2) = 2e-67
 Identities = 103/130 (79%), Positives = 122/130 (93%)
 Frame = -2

Query: 704 ISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGESVGPLAAYYQVPLRHILL 525
           I++ EG+ +NTIQSKAL+GIG IGEVP+LLAK QAYMN+SGESVGPLAA+Y++PLRHILL
Sbjct: 77  IAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILL 136

Query: 524 IYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRLCIGIGNPPGTMDRKAYLL 345
           IYDEM+LPNG++R+QPKGGHG+HNGVKSV+DHLDGC+ FPRLCIGIGNPPGTMD KA+LL
Sbjct: 137 IYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLL 196

Query: 344 QKFSSEERKQ 315
           QKFS  ER+Q
Sbjct: 197 QKFSPTEREQ 206



 Score = 56.2 bits (134), Expect(2) = 2e-67
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = -3

Query: 232 VDIALEQAVEAVRNLLLKGFDDNITKFNLGQKYKFHRV 119
           +D +LEQ VEA+R L+L GF + IT+FNLGQKYK+H+V
Sbjct: 207 IDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244


>ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycine max]
           gi|255645504|gb|ACU23247.1| unknown [Glycine max]
          Length = 244

 Score =  226 bits (575), Expect(2) = 2e-67
 Identities = 105/130 (80%), Positives = 120/130 (92%)
 Frame = -2

Query: 704 ISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGESVGPLAAYYQVPLRHILL 525
           +S  EGI++NTIQSKAL+GIGSIGEVP+LLAK Q YMN+SGESVGPLAAYYQVPLRHILL
Sbjct: 77  LSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLRHILL 136

Query: 524 IYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRLCIGIGNPPGTMDRKAYLL 345
           ++DE SLPNGV+RLQPKGGHG+HNG+K+V+ HLDGC AFPRL +GIGNPPGTMD +AYLL
Sbjct: 137 VFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAYLL 196

Query: 344 QKFSSEERKQ 315
           QKFS EERKQ
Sbjct: 197 QKFSVEERKQ 206



 Score = 56.2 bits (134), Expect(2) = 2e-67
 Identities = 23/38 (60%), Positives = 32/38 (84%)
 Frame = -3

Query: 232 VDIALEQAVEAVRNLLLKGFDDNITKFNLGQKYKFHRV 119
           +D +LEQAV AVR ++L GFD ++ +FNLGQKYK+H+V
Sbjct: 207 IDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244


>ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
           gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase,
           putative [Ricinus communis]
          Length = 253

 Score =  224 bits (571), Expect(2) = 3e-67
 Identities = 105/130 (80%), Positives = 120/130 (92%)
 Frame = -2

Query: 704 ISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGESVGPLAAYYQVPLRHILL 525
           I++ E + +NTIQSKAL+GIG I EVP+LL K QAYMN+SGESVGPLAA+YQVPLRHILL
Sbjct: 86  IAKAEAVAMNTIQSKALIGIGCIKEVPILLVKPQAYMNFSGESVGPLAAHYQVPLRHILL 145

Query: 524 IYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRLCIGIGNPPGTMDRKAYLL 345
           IYDEMSLPNGVMRLQPKGGHG+HNGVKSV++HLDGC+ FPRLCIGIGNPPGTMD +A+LL
Sbjct: 146 IYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLL 205

Query: 344 QKFSSEERKQ 315
           QKFSS ER+Q
Sbjct: 206 QKFSSTEREQ 215



 Score = 57.4 bits (137), Expect(2) = 3e-67
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = -3

Query: 232 VDIALEQAVEAVRNLLLKGFDDNITKFNLGQKYKFHRV 119
           +D AL Q ++AVR L+L GF+ NIT+FNLGQKYK+H+V
Sbjct: 216 IDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKYHKV 253


>ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
           gi|449519774|ref|XP_004166909.1| PREDICTED:
           chloroplastic group IIB intron splicing facilitator
           CRS2-B, chloroplastic-like [Cucumis sativus]
          Length = 249

 Score =  218 bits (555), Expect(2) = 3e-64
 Identities = 102/130 (78%), Positives = 118/130 (90%)
 Frame = -2

Query: 704 ISEEEGIKLNTIQSKALMGIGSIGEVPVLLAKSQAYMNYSGESVGPLAAYYQVPLRHILL 525
           I++ +GI +NTIQSKAL+GIGSIGEVP+LLAK Q YMN+ GESVGPLAA+YQ+PLRH+LL
Sbjct: 82  IAQAQGILMNTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLL 141

Query: 524 IYDEMSLPNGVMRLQPKGGHGYHNGVKSVIDHLDGCKAFPRLCIGIGNPPGTMDRKAYLL 345
            YDEM+LPNGV+RLQPK GHG+HNGVKSV+ HLDG + FPRLCIGIGNPPGTMD KA+LL
Sbjct: 142 TYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLL 201

Query: 344 QKFSSEERKQ 315
           QKFSS ERKQ
Sbjct: 202 QKFSSVERKQ 211



 Score = 53.5 bits (127), Expect(2) = 3e-64
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = -3

Query: 232 VDIALEQAVEAVRNLLLKGFDDNITKFNLGQKYKFHRV 119
           +D ALEQ VEAVR L L GF   + +FNL QKYK+H+V
Sbjct: 212 IDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 249