BLASTX nr result

ID: Coptis21_contig00012242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012242
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   194   8e-48
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002518464.1| hydrolase, putative [Ricinus communis] gi|22...   191   7e-47
ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA ...   187   6e-46
ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   187   6e-46

>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  194 bits (492), Expect = 8e-48
 Identities = 88/115 (76%), Positives = 101/115 (87%)
 Frame = -2

Query: 520 VFGGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFC 341
           +FGGDMNWD+K DG+FPL DGWVDAWA+ RPGE+G+TYDTK+N MLSGNR LQKRLDRF 
Sbjct: 332 IFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFM 391

Query: 340 CSLRDYKISGIDMIGTEAIPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTIHS 176
           C L D+KIS IDMIG E IPGLSYCKEKKV+ ++Q+L LPVLPSDHYGL+LTI S
Sbjct: 392 CRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTISS 446


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  194 bits (492), Expect = 8e-48
 Identities = 88/115 (76%), Positives = 101/115 (87%)
 Frame = -2

Query: 520  VFGGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFC 341
            +FGGDMNWD+K DG+FPL DGWVDAWA+ RPGE+G+TYDTK+N MLSGNR LQKRLDRF 
Sbjct: 846  IFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFM 905

Query: 340  CSLRDYKISGIDMIGTEAIPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTIHS 176
            C L D+KIS IDMIG E IPGLSYCKEKKV+ ++Q+L LPVLPSDHYGL+LTI S
Sbjct: 906  CRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTISS 960


>ref|XP_002518464.1| hydrolase, putative [Ricinus communis] gi|223542309|gb|EEF43851.1|
           hydrolase, putative [Ricinus communis]
          Length = 429

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/113 (78%), Positives = 99/113 (87%)
 Frame = -2

Query: 520 VFGGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFC 341
           +FGGDMNWDDKLDG+FPL  GWVDAWAE RPGE+G+TYDTK N MLSGNR LQKRLDRF 
Sbjct: 314 IFGGDMNWDDKLDGQFPLPGGWVDAWAELRPGENGWTYDTKCNKMLSGNRTLQKRLDRFV 373

Query: 340 CSLRDYKISGIDMIGTEAIPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTI 182
           CSLRD+KIS ID IG EAIPGLS+ KEKKV+ +V+ L LPVLPSDHYGL+LTI
Sbjct: 374 CSLRDFKISKIDTIGKEAIPGLSHIKEKKVRKEVKMLELPVLPSDHYGLLLTI 426


>ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase
           2-like [Cucumis sativus]
          Length = 463

 Score =  187 bits (476), Expect = 6e-46
 Identities = 84/115 (73%), Positives = 99/115 (86%)
 Frame = -2

Query: 520 VFGGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFC 341
           +FGGDMNWDDKLDG+FP  DGW+DAW E RPGE+G+TYDTK+N MLSGNR LQKRLDRF 
Sbjct: 348 IFGGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFI 407

Query: 340 CSLRDYKISGIDMIGTEAIPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTIHS 176
           C L+D+K++ I+MIGT++IPGLSY KEKKV  D + L LPVLPSDHYGL+LTI S
Sbjct: 408 CKLQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTISS 462


>ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Cucumis sativus]
          Length = 485

 Score =  187 bits (476), Expect = 6e-46
 Identities = 84/115 (73%), Positives = 99/115 (86%)
 Frame = -2

Query: 520 VFGGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFC 341
           +FGGDMNWDDKLDG+FP  DGW+DAW E RPGE+G+TYDTK+N MLSGNR LQKRLDRF 
Sbjct: 370 IFGGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFI 429

Query: 340 CSLRDYKISGIDMIGTEAIPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTIHS 176
           C L+D+K++ I+MIGT++IPGLSY KEKKV  D + L LPVLPSDHYGL+LTI S
Sbjct: 430 CKLQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTISS 484


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